RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 ZNF594Q96JF6 807 aaPredicted RBP12.78□□□□□ -0.36
GARNL3-211ENST00000460176 CDC5LQ99459 802 aaKnown RBP12.78□□□□□ -0.36
GARNL3-211ENST00000460176 PIM2Q9P1W9 311 aa12.78□□□□□ -0.36
GARNL3-211ENST00000460176 NEFLP07196 543 aa12.77□□□□□ -0.37
GARNL3-211ENST00000460176 RPS8P62241 208 aaKnown RBP12.77□□□□□ -0.37
GARNL3-211ENST00000460176 PTPN12Q05209 780 aaKnown RBP12.77□□□□□ -0.37
GARNL3-211ENST00000460176 SLC51AQ86UW1 340 aa12.77□□□□□ -0.37
GARNL3-211ENST00000460176 ANKRD18AQ8IVF6 992 aa12.77□□□□□ -0.37
GARNL3-211ENST00000460176 TTLL6Q8N841 843 aa12.77□□□□□ -0.37
GARNL3-211ENST00000460176 KLHDC4Q8TBB5 520 aa12.77□□□□□ -0.37
GARNL3-211ENST00000460176 PPEF1O14829 653 aaPredicted RBP12.76□□□□□ -0.37
GARNL3-211ENST00000460176 BBOX1O75936 387 aa12.76□□□□□ -0.37
GARNL3-211ENST00000460176 C7orf43Q8WVR3 580 aa12.76□□□□□ -0.37
GARNL3-211ENST00000460176 COPRSQ9NQ92 184 aa12.76□□□□□ -0.37
GARNL3-211ENST00000460176 ZBTB47Q9UFB7 747 aaPredicted RBP12.76□□□□□ -0.37
GARNL3-211ENST00000460176 WWC3Q9ULE0 1092 aa12.76□□□□□ -0.37
GARNL3-211ENST00000460176 PA2G4Q9UQ80 394 aaKnown RBP12.76□□□□□ -0.37
GARNL3-211ENST00000460176 SNED1Q8TER0 1413 aa12.76□□□□□ -0.37
GARNL3-211ENST00000460176 FER1L6Q2WGJ9 1857 aa12.76□□□□□ -0.37
GARNL3-211ENST00000460176 IGHMBP2P38935 993 aaKnown RBP12.75□□□□□ -0.37
GARNL3-211ENST00000460176 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
GARNL3-211ENST00000460176 TAF7LQ5H9L4 462 aa12.75□□□□□ -0.37
GARNL3-211ENST00000460176 DUOX1Q9NRD9 1551 aa12.75□□□□□ -0.37
GARNL3-211ENST00000460176 ATP6V0A2Q9Y487 856 aa12.75□□□□□ -0.37
GARNL3-211ENST00000460176 LRRC24Q50LG9 513 aa12.74□□□□□ -0.37
GARNL3-211ENST00000460176 LDHAL6AQ6ZMR3 332 aa12.74□□□□□ -0.37
GARNL3-211ENST00000460176 TMC4Q7Z404 712 aa12.74□□□□□ -0.37
GARNL3-211ENST00000460176 PUS3Q9BZE2 481 aaKnown RBP12.74□□□□□ -0.37
GARNL3-211ENST00000460176 BSDC1Q9NW68 430 aaPredicted RBP12.74□□□□□ -0.37
GARNL3-211ENST00000460176 EYA2O00167 538 aa12.73□□□□□ -0.37
GARNL3-211ENST00000460176 C21orf2O43822 256 aa12.73□□□□□ -0.37
GARNL3-211ENST00000460176 HMMRO75330 724 aa12.73□□□□□ -0.37
GARNL3-211ENST00000460176 CIAO1O76071 339 aa12.73□□□□□ -0.37
GARNL3-211ENST00000460176 OLFM4Q6UX06 510 aa12.73□□□□□ -0.37
GARNL3-211ENST00000460176 ATG9AQ7Z3C6 839 aa12.73□□□□□ -0.37
GARNL3-211ENST00000460176 SP8Q8IXZ3 490 aa12.73□□□□□ -0.37
GARNL3-211ENST00000460176 MPHOSPH8Q99549 860 aa12.73□□□□□ -0.37
GARNL3-211ENST00000460176 SIL1Q9H173 461 aa12.73□□□□□ -0.37
GARNL3-211ENST00000460176 BCS1LQ9Y276 419 aa12.73□□□□□ -0.37
GARNL3-211ENST00000460176 NOP58Q9Y2X3 529 aaKnown RBP12.73□□□□□ -0.37
GARNL3-211ENST00000460176 RIPOR2Q9Y4F9 1068 aa12.73□□□□□ -0.37
GARNL3-211ENST00000460176 ARAP2Q8WZ64 1704 aa12.73□□□□□ -0.37
GARNL3-211ENST00000460176 HDAC1Q13547 482 aaPredicted RBP12.72□□□□□ -0.37
GARNL3-211ENST00000460176 CNNM1Q9NRU3 951 aa12.72□□□□□ -0.37
GARNL3-211ENST00000460176 MINPP1Q9UNW1 487 aa12.72□□□□□ -0.37
GARNL3-211ENST00000460176 SURF6O75683 361 aaKnown RBP12.71□□□□□ -0.37
GARNL3-211ENST00000460176 YBX3P16989 372 aaKnown RBP eCLIP12.71□□□□□ -0.37
GARNL3-211ENST00000460176 GPSM2P81274 684 aa12.71□□□□□ -0.37
GARNL3-211ENST00000460176 EXOC6BQ9Y2D4 811 aa12.71□□□□□ -0.37
GARNL3-211ENST00000460176 SSUH2Q9Y2M2 353 aa12.71□□□□□ -0.37
GARNL3-211ENST00000460176 MROH5Q6ZUA9 1318 aa12.7□□□□□ -0.38
GARNL3-211ENST00000460176 IGHDP01880 384 aa12.7□□□□□ -0.38
GARNL3-211ENST00000460176 IL15P40933 162 aaPredicted RBP12.7□□□□□ -0.38
GARNL3-211ENST00000460176 CHRNDQ07001 517 aa12.7□□□□□ -0.38
GARNL3-211ENST00000460176 CCDC93Q567U6 631 aa12.7□□□□□ -0.38
GARNL3-211ENST00000460176 ERICH6BQ5W0A0 696 aa12.7□□□□□ -0.38
GARNL3-211ENST00000460176 CC2D2BQ6DHV5 1058 aa12.7□□□□□ -0.38
GARNL3-211ENST00000460176 VGLL2Q8N8G2 317 aa12.7□□□□□ -0.38
GARNL3-211ENST00000460176 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.7□□□□□ -0.38
GARNL3-211ENST00000460176 CCDC88AQ3V6T2 1871 aa12.7□□□□□ -0.38
GARNL3-211ENST00000460176 XDHP47989 1333 aa12.69□□□□□ -0.38
GARNL3-211ENST00000460176 SASH1O94885 1247 aa12.69□□□□□ -0.38
GARNL3-211ENST00000460176 G3BP1Q13283 466 aaKnown RBP eCLIP12.69□□□□□ -0.38
GARNL3-211ENST00000460176 METTL24Q5JXM2 366 aa12.69□□□□□ -0.38
GARNL3-211ENST00000460176 SOGA3Q5TF21 947 aa12.69□□□□□ -0.38
GARNL3-211ENST00000460176 HELBQ8NG08 1087 aaPredicted RBP12.69□□□□□ -0.38
GARNL3-211ENST00000460176 ANKRD2Q9GZV1 360 aa12.69□□□□□ -0.38
GARNL3-211ENST00000460176 DCTPP1Q9H773 170 aa12.69□□□□□ -0.38
GARNL3-211ENST00000460176 PODXL2Q9NZ53 605 aa12.69□□□□□ -0.38
GARNL3-211ENST00000460176 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.69□□□□□ -0.38
GARNL3-211ENST00000460176 SBF1O95248 1867 aa12.69□□□□□ -0.38
GARNL3-211ENST00000460176 WTIPA6NIX2 430 aaPredicted RBP12.68□□□□□ -0.38
GARNL3-211ENST00000460176 NFKBIEO00221 500 aa12.68□□□□□ -0.38
GARNL3-211ENST00000460176 TAF5LO75529 589 aa12.68□□□□□ -0.38
GARNL3-211ENST00000460176 GRIPAP1Q4V328 841 aa12.68□□□□□ -0.38
GARNL3-211ENST00000460176 HSP90AB4PQ58FF6 505 aa12.68□□□□□ -0.38
GARNL3-211ENST00000460176 DPP8Q6V1X1 898 aaPredicted RBP12.68□□□□□ -0.38
GARNL3-211ENST00000460176 RTKN2Q8IZC4 609 aa12.68□□□□□ -0.38
GARNL3-211ENST00000460176 PELP1Q8IZL8 1130 aaKnown RBP12.68□□□□□ -0.38
GARNL3-211ENST00000460176 MPNDQ8N594 471 aa12.68□□□□□ -0.38
GARNL3-211ENST00000460176 TMX4Q9H1E5 349 aaPredicted RBP12.68□□□□□ -0.38
GARNL3-211ENST00000460176 RWDD1Q9H446 243 aaPredicted RBP12.68□□□□□ -0.38
GARNL3-211ENST00000460176 NSFL1CQ9UNZ2 370 aaKnown RBP12.68□□□□□ -0.38
GARNL3-211ENST00000460176 DICER1Q9UPY3 1922 aaKnown RBP12.67□□□□□ -0.38
GARNL3-211ENST00000460176 PDE8BO95263 885 aa12.67□□□□□ -0.38
GARNL3-211ENST00000460176 ATP2B4P23634 1241 aa12.67□□□□□ -0.38
GARNL3-211ENST00000460176 TFCP2Q12800 502 aa12.67□□□□□ -0.38
GARNL3-211ENST00000460176 OS9Q13438 667 aaPredicted RBP12.67□□□□□ -0.38
GARNL3-211ENST00000460176 TBC1D16Q8TBP0 767 aa12.67□□□□□ -0.38
GARNL3-211ENST00000460176 RTFDC1Q9BY42 306 aaPredicted RBP12.67□□□□□ -0.38
GARNL3-211ENST00000460176 ANKIB1Q9P2G1 1089 aa12.67□□□□□ -0.38
GARNL3-211ENST00000460176 CEP126Q9P2H0 1117 aa12.67□□□□□ -0.38
GARNL3-211ENST00000460176 POLLQ9UGP5 575 aa12.67□□□□□ -0.38
GARNL3-211ENST00000460176 ZNF609O15014 1411 aa12.67□□□□□ -0.38
GARNL3-211ENST00000460176 LTBP3Q9NS15 1303 aa12.66□□□□□ -0.38
GARNL3-211ENST00000460176 IRS2Q9Y4H2 1338 aa12.66□□□□□ -0.38
GARNL3-211ENST00000460176 SNAP23O00161 211 aa12.66□□□□□ -0.38
GARNL3-211ENST00000460176 RAB11FIP3O75154 756 aa12.66□□□□□ -0.38
GARNL3-211ENST00000460176 FGFR2P21802 821 aa12.66□□□□□ -0.38
GARNL3-211ENST00000460176 FKBP4Q02790 459 aaKnown RBP eCLIP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms