RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 IGKV5-2P06315 115 aa11.05□□□□□ -0.64
VPS50-207ENST00000458530 PIP4K2AP48426 406 aaPredicted RBP11.05□□□□□ -0.64
VPS50-207ENST00000458530 CWF19L2Q2TBE0 894 aaKnown RBP11.05□□□□□ -0.64
VPS50-207ENST00000458530 SSH3Q8TE77 659 aa11.05□□□□□ -0.64
VPS50-207ENST00000458530 LNPKQ9C0E8 428 aa11.05□□□□□ -0.64
VPS50-207ENST00000458530 SCUBE2Q9NQ36 999 aa11.05□□□□□ -0.64
VPS50-207ENST00000458530 SRP68Q9UHB9 627 aaKnown RBP11.05□□□□□ -0.64
VPS50-207ENST00000458530 ZNF330Q9Y3S2 320 aaPredicted RBP11.05□□□□□ -0.64
VPS50-207ENST00000458530 LAMB2P55268 1798 aa11.05□□□□□ -0.64
VPS50-207ENST00000458530 DLEC1Q9Y238 1755 aa11.04□□□□□ -0.64
VPS50-207ENST00000458530 ERVV-1B6SEH8 477 aa11.04□□□□□ -0.64
VPS50-207ENST00000458530 SRGAP3O43295 1099 aa11.04□□□□□ -0.64
VPS50-207ENST00000458530 NBPF7P0C2Y1 421 aaPredicted RBP11.04□□□□□ -0.64
VPS50-207ENST00000458530 LMNB1P20700 586 aa11.04□□□□□ -0.64
VPS50-207ENST00000458530 CRKLP46109 303 aaKnown RBP11.04□□□□□ -0.64
VPS50-207ENST00000458530 RASSF7Q02833 373 aa11.04□□□□□ -0.64
VPS50-207ENST00000458530 ERC1Q8IUD2 1116 aa11.04□□□□□ -0.64
VPS50-207ENST00000458530 ZBTB3Q9H5J0 574 aa11.04□□□□□ -0.64
VPS50-207ENST00000458530 RGL2O15211 777 aa11.03□□□□□ -0.64
VPS50-207ENST00000458530 PDE4AP27815 886 aa11.03□□□□□ -0.64
VPS50-207ENST00000458530 TRIM28Q13263 835 aaKnown RBP11.03□□□□□ -0.64
VPS50-207ENST00000458530 TCIRG1Q13488 830 aa11.03□□□□□ -0.64
VPS50-207ENST00000458530 INTS5Q6P9B9 1019 aaKnown RBP11.03□□□□□ -0.64
VPS50-207ENST00000458530 GIGYF2Q6Y7W6 1299 aaKnown RBP11.03□□□□□ -0.64
VPS50-207ENST00000458530 MAMSTRQ6ZN01 415 aa11.03□□□□□ -0.64
VPS50-207ENST00000458530 TTLL7Q6ZT98 887 aa11.03□□□□□ -0.64
VPS50-207ENST00000458530 PPP1R42Q7Z4L9 355 aa11.03□□□□□ -0.64
VPS50-207ENST00000458530 LRRCC1Q9C099 1032 aa11.03□□□□□ -0.64
VPS50-207ENST00000458530 OCEL1Q9H607 264 aa11.03□□□□□ -0.64
VPS50-207ENST00000458530 ZNF652Q9Y2D9 606 aa11.03□□□□□ -0.64
VPS50-207ENST00000458530 ZBTB1Q9Y2K1 713 aa11.03□□□□□ -0.64
VPS50-207ENST00000458530 PNMA6EA0A0J9YXQ4 647 aa11.02□□□□□ -0.65
VPS50-207ENST00000458530 NFKBIEO00221 500 aa11.02□□□□□ -0.65
VPS50-207ENST00000458530 HSP90B1P14625 803 aaKnown RBP11.02□□□□□ -0.65
VPS50-207ENST00000458530 MKRN3Q13064 507 aaKnown RBP11.02□□□□□ -0.65
VPS50-207ENST00000458530 DZIP3Q86Y13 1208 aaKnown RBP11.02□□□□□ -0.65
VPS50-207ENST00000458530 KIF1BPQ96EK5 621 aa11.02□□□□□ -0.65
VPS50-207ENST00000458530 BACH2Q9BYV9 841 aa11.02□□□□□ -0.65
VPS50-207ENST00000458530 PRDM10Q9NQV6 1147 aa11.02□□□□□ -0.65
VPS50-207ENST00000458530 TIAM2Q8IVF5 1701 aa11.01□□□□□ -0.65
VPS50-207ENST00000458530 ATP5J2-PTCD1G3V325 749 aa11.01□□□□□ -0.65
VPS50-207ENST00000458530 EIF5P55010 431 aaKnown RBP11.01□□□□□ -0.65
VPS50-207ENST00000458530 OS9Q13438 667 aaPredicted RBP11.01□□□□□ -0.65
VPS50-207ENST00000458530 UBE3BQ7Z3V4 1068 aa11.01□□□□□ -0.65
VPS50-207ENST00000458530 SUCLG2Q96I99 432 aa11.01□□□□□ -0.65
VPS50-207ENST00000458530 ISCA1Q9BUE6 129 aa11.01□□□□□ -0.65
VPS50-207ENST00000458530 H7C1W4 665 aa11□□□□□ -0.65
VPS50-207ENST00000458530 SURF6O75683 361 aaKnown RBP11□□□□□ -0.65
VPS50-207ENST00000458530 PCCAP05165 728 aaPredicted RBP11□□□□□ -0.65
VPS50-207ENST00000458530 BMP2KLQ5H9B9 411 aa11□□□□□ -0.65
VPS50-207ENST00000458530 SKAP1Q86WV1 359 aa11□□□□□ -0.65
VPS50-207ENST00000458530 BICC1Q9H694 974 aaKnown RBP11□□□□□ -0.65
VPS50-207ENST00000458530 UPF2Q9HAU5 1272 aaKnown RBP11□□□□□ -0.65
VPS50-207ENST00000458530 EXOC6BQ9Y2D4 811 aa11□□□□□ -0.65
VPS50-207ENST00000458530 NOP58Q9Y2X3 529 aaKnown RBP11□□□□□ -0.65
VPS50-207ENST00000458530 RBM19Q9Y4C8 960 aaKnown RBP11□□□□□ -0.65
VPS50-207ENST00000458530 AOX1Q06278 1338 aa11□□□□□ -0.65
VPS50-207ENST00000458530 FOXN1O15353 648 aa10.99□□□□□ -0.65
VPS50-207ENST00000458530 G3BP1Q13283 466 aaKnown RBP eCLIP10.99□□□□□ -0.65
VPS50-207ENST00000458530 NFIXQ14938 502 aa10.99□□□□□ -0.65
VPS50-207ENST00000458530 RABL6Q3YEC7 729 aaPredicted RBP10.99□□□□□ -0.65
VPS50-207ENST00000458530 PARP10Q53GL7 1025 aa10.99□□□□□ -0.65
VPS50-207ENST00000458530 PDCD7Q8N8D1 485 aaKnown RBP10.99□□□□□ -0.65
VPS50-207ENST00000458530 BCL2L12Q9HB09 334 aa10.99□□□□□ -0.65
VPS50-207ENST00000458530 PASKQ96RG2 1323 aa10.99□□□□□ -0.65
VPS50-207ENST00000458530 CDHR2Q9BYE9 1310 aa10.99□□□□□ -0.65
VPS50-207ENST00000458530 CNTNAP1P78357 1384 aa10.99□□□□□ -0.65
VPS50-207ENST00000458530 APBB1O00213 710 aa10.98□□□□□ -0.65
VPS50-207ENST00000458530 RIOK3O14730 519 aaKnown RBP10.98□□□□□ -0.65
VPS50-207ENST00000458530 ANP32AP39687 249 aaKnown RBP10.98□□□□□ -0.65
VPS50-207ENST00000458530 C8orf34Q49A92 452 aa10.98□□□□□ -0.65
VPS50-207ENST00000458530 CLEC4GQ6UXB4 293 aa10.98□□□□□ -0.65
VPS50-207ENST00000458530 TTLL6Q8N841 843 aa10.98□□□□□ -0.65
VPS50-207ENST00000458530 ZBTB38Q8NAP3 1195 aaPredicted RBP10.98□□□□□ -0.65
VPS50-207ENST00000458530 GPATCH3Q96I76 525 aa10.98□□□□□ -0.65
VPS50-207ENST00000458530 LTBP3Q9NS15 1303 aa10.98□□□□□ -0.65
VPS50-207ENST00000458530 CASP7P55210 303 aa10.97□□□□□ -0.65
VPS50-207ENST00000458530 USPL1Q5W0Q7 1092 aa10.97□□□□□ -0.65
VPS50-207ENST00000458530 CASC1Q6TDU7 716 aa10.97□□□□□ -0.65
VPS50-207ENST00000458530 PLEKHM2Q8IWE5 1019 aa10.97□□□□□ -0.65
VPS50-207ENST00000458530 CLASRPQ8N2M8 674 aaKnown RBP10.97□□□□□ -0.65
VPS50-207ENST00000458530 RHPN1Q8TCX5 695 aa10.97□□□□□ -0.65
VPS50-207ENST00000458530 PLA2G12BQ9BX93 195 aa10.97□□□□□ -0.65
VPS50-207ENST00000458530 OSBPL3Q9H4L5 887 aa10.97□□□□□ -0.65
VPS50-207ENST00000458530 NARFQ9UHQ1 456 aa10.97□□□□□ -0.65
VPS50-207ENST00000458530 CARMIL3Q8ND23 1372 aa10.97□□□□□ -0.65
VPS50-207ENST00000458530 FER1L6Q2WGJ9 1857 aa10.97□□□□□ -0.65
VPS50-207ENST00000458530 DICER1Q9UPY3 1922 aaKnown RBP10.97□□□□□ -0.65
VPS50-207ENST00000458530 DDX60Q8IY21 1712 aaKnown RBP10.96□□□□□ -0.65
VPS50-207ENST00000458530 MX1P20591 662 aa10.96□□□□□ -0.65
VPS50-207ENST00000458530 TTC22Q5TAA0 569 aa10.96□□□□□ -0.65
VPS50-207ENST00000458530 NLRP10Q86W26 655 aa10.96□□□□□ -0.65
VPS50-207ENST00000458530 KAZALD1Q96I82 304 aa10.96□□□□□ -0.65
VPS50-207ENST00000458530 COPRSQ9NQ92 184 aa10.96□□□□□ -0.65
VPS50-207ENST00000458530 WBP1LQ9NX94 342 aa10.96□□□□□ -0.65
VPS50-207ENST00000458530 TBC1D2BQ9UPU7 963 aa10.96□□□□□ -0.65
VPS50-207ENST00000458530 CHMP3Q9Y3E7 222 aa10.96□□□□□ -0.65
VPS50-207ENST00000458530 CCDC88AQ3V6T2 1871 aa10.95□□□□□ -0.66
VPS50-207ENST00000458530 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.95□□□□□ -0.66
VPS50-207ENST00000458530 SMARCA5O60264 1052 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms