RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 SSH3Q8TE77 659 aa10.8□□□□□ -0.68
CLTCL1-204ENST00000458188 CDC5LQ99459 802 aaKnown RBP10.8□□□□□ -0.68
CLTCL1-204ENST00000458188 CNNM1Q9NRU3 951 aa10.8□□□□□ -0.68
CLTCL1-204ENST00000458188 EXOC6BQ9Y2D4 811 aa10.8□□□□□ -0.68
CLTCL1-204ENST00000458188 NRXN2Q9P2S2 1712 aa10.79□□□□□ -0.68
CLTCL1-204ENST00000458188 RIC1Q4ADV7 1423 aa10.79□□□□□ -0.68
CLTCL1-204ENST00000458188 BBOX1O75936 387 aa10.79□□□□□ -0.68
CLTCL1-204ENST00000458188 GPR101Q96P66 508 aaPredicted RBP10.79□□□□□ -0.68
CLTCL1-204ENST00000458188 MINPP1Q9UNW1 487 aa10.79□□□□□ -0.68
CLTCL1-204ENST00000458188 PDZRN3Q9UPQ7 1066 aa10.79□□□□□ -0.68
CLTCL1-204ENST00000458188 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.79□□□□□ -0.68
CLTCL1-204ENST00000458188 EYA2O00167 538 aa10.78□□□□□ -0.68
CLTCL1-204ENST00000458188 GPSM2P81274 684 aa10.78□□□□□ -0.68
CLTCL1-204ENST00000458188 G3BP1Q13283 466 aaKnown RBP eCLIP10.78□□□□□ -0.68
CLTCL1-204ENST00000458188 OS9Q13438 667 aaPredicted RBP10.78□□□□□ -0.68
CLTCL1-204ENST00000458188 B4GALNT3Q6L9W6 998 aa10.78□□□□□ -0.68
CLTCL1-204ENST00000458188 ATG9AQ7Z3C6 839 aa10.78□□□□□ -0.68
CLTCL1-204ENST00000458188 COPRSQ9NQ92 184 aa10.78□□□□□ -0.68
CLTCL1-204ENST00000458188 BSDC1Q9NW68 430 aaPredicted RBP10.78□□□□□ -0.68
CLTCL1-204ENST00000458188 NSFL1CQ9UNZ2 370 aaKnown RBP10.78□□□□□ -0.68
CLTCL1-204ENST00000458188 RIPOR2Q9Y4F9 1068 aa10.78□□□□□ -0.68
CLTCL1-204ENST00000458188 WDR90Q96KV7 1748 aa10.78□□□□□ -0.68
CLTCL1-204ENST00000458188 RTL9Q8NET4 1388 aa10.77□□□□□ -0.68
CLTCL1-204ENST00000458188 SMARCA5O60264 1052 aaPredicted RBP10.77□□□□□ -0.69
CLTCL1-204ENST00000458188 HMMRO75330 724 aa10.77□□□□□ -0.69
CLTCL1-204ENST00000458188 CHRNDQ07001 517 aa10.77□□□□□ -0.69
CLTCL1-204ENST00000458188 TFCP2Q12800 502 aa10.77□□□□□ -0.69
CLTCL1-204ENST00000458188 METTL24Q5JXM2 366 aa10.77□□□□□ -0.69
CLTCL1-204ENST00000458188 SP8Q8IXZ3 490 aa10.77□□□□□ -0.69
CLTCL1-204ENST00000458188 RBM46Q8TBY0 533 aaKnown RBP10.77□□□□□ -0.69
CLTCL1-204ENST00000458188 C7orf43Q8WVR3 580 aa10.77□□□□□ -0.69
CLTCL1-204ENST00000458188 ANKIB1Q9P2G1 1089 aa10.77□□□□□ -0.69
CLTCL1-204ENST00000458188 ATP6V0A2Q9Y487 856 aa10.77□□□□□ -0.69
CLTCL1-204ENST00000458188 DDX60Q8IY21 1712 aaKnown RBP10.77□□□□□ -0.69
CLTCL1-204ENST00000458188 ANKRD31Q8N7Z5 1873 aa10.76□□□□□ -0.69
CLTCL1-204ENST00000458188 SASH1O94885 1247 aa10.76□□□□□ -0.69
CLTCL1-204ENST00000458188 SLC34A2O95436 690 aa10.76□□□□□ -0.69
CLTCL1-204ENST00000458188 ARHGAP27Q6ZUM4 889 aa10.76□□□□□ -0.69
CLTCL1-204ENST00000458188 TMX4Q9H1E5 349 aaPredicted RBP10.76□□□□□ -0.69
CLTCL1-204ENST00000458188 RWDD1Q9H446 243 aaPredicted RBP10.76□□□□□ -0.69
CLTCL1-204ENST00000458188 C6orf229H3BNL8 230 aa10.75□□□□□ -0.69
CLTCL1-204ENST00000458188 RIMBP2O15034 1052 aa10.75□□□□□ -0.69
CLTCL1-204ENST00000458188 KLRK1P26718 216 aa10.75□□□□□ -0.69
CLTCL1-204ENST00000458188 IL15P40933 162 aaPredicted RBP10.75□□□□□ -0.69
CLTCL1-204ENST00000458188 HTRA3P83110 453 aa10.75□□□□□ -0.69
CLTCL1-204ENST00000458188 FSTL1Q12841 308 aa10.75□□□□□ -0.69
CLTCL1-204ENST00000458188 AAMPQ13685 434 aa10.75□□□□□ -0.69
CLTCL1-204ENST00000458188 MPNDQ8N594 471 aa10.75□□□□□ -0.69
CLTCL1-204ENST00000458188 DCTPP1Q9H773 170 aa10.75□□□□□ -0.69
CLTCL1-204ENST00000458188 IL1RAPL2Q9NP60 686 aa10.75□□□□□ -0.69
CLTCL1-204ENST00000458188 POLLQ9UGP5 575 aa10.75□□□□□ -0.69
CLTCL1-204ENST00000458188 NOP58Q9Y2X3 529 aaKnown RBP10.75□□□□□ -0.69
CLTCL1-204ENST00000458188 GTF3C3Q9Y5Q9 886 aa10.75□□□□□ -0.69
CLTCL1-204ENST00000458188 CIAO1O76071 339 aa10.74□□□□□ -0.69
CLTCL1-204ENST00000458188 TIMM10P62072 90 aa10.74□□□□□ -0.69
CLTCL1-204ENST00000458188 RASSF7Q02833 373 aa10.74□□□□□ -0.69
CLTCL1-204ENST00000458188 HDAC1Q13547 482 aaPredicted RBP10.74□□□□□ -0.69
CLTCL1-204ENST00000458188 DPP8Q6V1X1 898 aaPredicted RBP10.74□□□□□ -0.69
CLTCL1-204ENST00000458188 CCDC136Q96JN2 1154 aa10.74□□□□□ -0.69
CLTCL1-204ENST00000458188 CEP126Q9P2H0 1117 aa10.74□□□□□ -0.69
CLTCL1-204ENST00000458188 N4BP2Q86UW6 1770 aaPredicted RBP10.74□□□□□ -0.69
CLTCL1-204ENST00000458188 COL11A2P13942 1736 aaPredicted RBP10.73□□□□□ -0.69
CLTCL1-204ENST00000458188 UFL1O94874 794 aa10.73□□□□□ -0.69
CLTCL1-204ENST00000458188 KCNJ4P48050 445 aa10.73□□□□□ -0.69
CLTCL1-204ENST00000458188 CCDC93Q567U6 631 aa10.73□□□□□ -0.69
CLTCL1-204ENST00000458188 ANKRD45Q5TZF3 282 aa10.73□□□□□ -0.69
CLTCL1-204ENST00000458188 TXNRD3Q86VQ6 643 aa10.73□□□□□ -0.69
CLTCL1-204ENST00000458188 TBC1D16Q8TBP0 767 aa10.73□□□□□ -0.69
CLTCL1-204ENST00000458188 RHPN1Q8TCX5 695 aa10.73□□□□□ -0.69
CLTCL1-204ENST00000458188 NEUROD6Q96NK8 337 aa10.73□□□□□ -0.69
CLTCL1-204ENST00000458188 ANKRD2Q9GZV1 360 aa10.73□□□□□ -0.69
CLTCL1-204ENST00000458188 CCDC8Q9H0W5 538 aaPredicted RBP10.73□□□□□ -0.69
CLTCL1-204ENST00000458188 NMRK2Q9NPI5 230 aa10.73□□□□□ -0.69
CLTCL1-204ENST00000458188 ZNF277Q9NRM2 450 aaPredicted RBP10.73□□□□□ -0.69
CLTCL1-204ENST00000458188 GGA1Q9UJY5 639 aa10.73□□□□□ -0.69
CLTCL1-204ENST00000458188 MROH5Q6ZUA9 1318 aa10.73□□□□□ -0.69
CLTCL1-204ENST00000458188 NFKBIEO00221 500 aa10.72□□□□□ -0.69
CLTCL1-204ENST00000458188 PDE8BO95263 885 aa10.72□□□□□ -0.69
CLTCL1-204ENST00000458188 ADORA1P30542 326 aa10.72□□□□□ -0.69
CLTCL1-204ENST00000458188 DOK7Q18PE1 504 aa10.72□□□□□ -0.69
CLTCL1-204ENST00000458188 TMC4Q7Z404 712 aa10.72□□□□□ -0.69
CLTCL1-204ENST00000458188 SKAP1Q86WV1 359 aa10.72□□□□□ -0.69
CLTCL1-204ENST00000458188 VGLL2Q8N8G2 317 aa10.72□□□□□ -0.69
CLTCL1-204ENST00000458188 PPP4R2Q9NY27 417 aa10.72□□□□□ -0.69
CLTCL1-204ENST00000458188 PCDH10Q9P2E7 1040 aa10.72□□□□□ -0.69
CLTCL1-204ENST00000458188 ZNF804BA4D1E1 1349 aa10.72□□□□□ -0.69
CLTCL1-204ENST00000458188 TAF1P21675 1872 aa10.72□□□□□ -0.69
CLTCL1-204ENST00000458188 RAB11FIP3O75154 756 aa10.71□□□□□ -0.69
CLTCL1-204ENST00000458188 ATP2B4P23634 1241 aa10.71□□□□□ -0.69
CLTCL1-204ENST00000458188 XDHP47989 1333 aa10.71□□□□□ -0.69
CLTCL1-204ENST00000458188 LAMB2P55268 1798 aa10.71□□□□□ -0.69
CLTCL1-204ENST00000458188 ATP2B3Q16720 1220 aa10.71□□□□□ -0.69
CLTCL1-204ENST00000458188 AOC3Q16853 763 aa10.71□□□□□ -0.69
CLTCL1-204ENST00000458188 HSP90AB4PQ58FF6 505 aa10.71□□□□□ -0.69
CLTCL1-204ENST00000458188 RTKN2Q8IZC4 609 aa10.71□□□□□ -0.69
CLTCL1-204ENST00000458188 EAF2Q96CJ1 260 aaPredicted RBP10.71□□□□□ -0.69
CLTCL1-204ENST00000458188 LRRCC1Q9C099 1032 aa10.71□□□□□ -0.69
CLTCL1-204ENST00000458188 KIAA1551Q9HCM1 1747 aa10.71□□□□□ -0.69
CLTCL1-204ENST00000458188 TLR7Q9NYK1 1049 aaKnown RBP10.71□□□□□ -0.69
CLTCL1-204ENST00000458188 FBXO3Q9UK99 471 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms