RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-217ENST00000450931 DBNDD1Q9H9R9 158 aa8.62□□□□□ -1.03
PMS1-217ENST00000450931 GGA3Q9NZ52 723 aa8.62□□□□□ -1.03
PMS1-217ENST00000450931 NSFL1CQ9UNZ2 370 aaKnown RBP8.62□□□□□ -1.03
PMS1-217ENST00000450931 TRPA1O75762 1119 aa8.61□□□□□ -1.03
PMS1-217ENST00000450931 MMP14P50281 582 aa8.61□□□□□ -1.03
PMS1-217ENST00000450931 GPSM2P81274 684 aa8.61□□□□□ -1.03
PMS1-217ENST00000450931 TBC1D16Q8TBP0 767 aa8.61□□□□□ -1.03
PMS1-217ENST00000450931 CELF1Q92879 486 aaKnown RBP8.61□□□□□ -1.03
PMS1-217ENST00000450931 POLLQ9UGP5 575 aa8.61□□□□□ -1.03
PMS1-217ENST00000450931 SCN9AQ15858 1988 aa8.61□□□□□ -1.03
PMS1-217ENST00000450931 ZNF646O15015 1829 aaPredicted RBP8.61□□□□□ -1.03
PMS1-217ENST00000450931 C6orf229H3BNL8 230 aa8.61□□□□□ -1.03
PMS1-217ENST00000450931 SOX10P56693 466 aa8.61□□□□□ -1.03
PMS1-217ENST00000450931 CFHR5Q9BXR6 569 aa8.61□□□□□ -1.03
PMS1-217ENST00000450931 COL4A1P02462 1669 aa8.61□□□□□ -1.03
PMS1-217ENST00000450931 RIPK4P57078 832 aa8.6□□□□□ -1.03
PMS1-217ENST00000450931 GCC1Q96CN9 775 aa8.6□□□□□ -1.03
PMS1-217ENST00000450931 ZC3H12CQ9C0D7 883 aaKnown RBP8.6□□□□□ -1.03
PMS1-217ENST00000450931 RBBP6Q7Z6E9 1792 aaKnown RBP8.6□□□□□ -1.03
PMS1-217ENST00000450931 CHL1O00533 1208 aa8.6□□□□□ -1.03
PMS1-217ENST00000450931 EGFRP00533 1210 aa8.6□□□□□ -1.03
PMS1-217ENST00000450931 ANXA1P04083 346 aa8.6□□□□□ -1.03
PMS1-217ENST00000450931 RPS8P62241 208 aaKnown RBP8.6□□□□□ -1.03
PMS1-217ENST00000450931 AIMP1Q12904 312 aaKnown RBP8.6□□□□□ -1.03
PMS1-217ENST00000450931 RSBN1LQ6PCB5 846 aaPredicted RBP8.6□□□□□ -1.03
PMS1-217ENST00000450931 DBF4Q9UBU7 674 aaPredicted RBP8.6□□□□□ -1.03
PMS1-217ENST00000450931 HPS5Q9UPZ3 1129 aa8.6□□□□□ -1.03
PMS1-217ENST00000450931 POLR2AP24928 1970 aaKnown RBP8.6□□□□□ -1.03
PMS1-217ENST00000450931 COL1A1P02452 1464 aaPredicted RBP8.59□□□□□ -1.03
PMS1-217ENST00000450931 RIMBP2O15034 1052 aa8.59□□□□□ -1.03
PMS1-217ENST00000450931 TMPOP42166 694 aaKnown RBP8.59□□□□□ -1.03
PMS1-217ENST00000450931 ANKRD13DQ6ZTN6 518 aa8.59□□□□□ -1.03
PMS1-217ENST00000450931 HYPKQ9NX55 129 aa8.59□□□□□ -1.03
PMS1-217ENST00000450931 HDGFL1Q5TGJ6 251 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 ANGEL2Q5VTE6 544 aaKnown RBP8.58□□□□□ -1.04
PMS1-217ENST00000450931 GMLQ99445 158 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 CHPF2Q9P2E5 772 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 GGA1Q9UJY5 639 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 MYO3BQ8WXR4 1341 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 G3V3G9 751 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 IRS4O14654 1257 aaPredicted RBP8.58□□□□□ -1.04
PMS1-217ENST00000450931 TM4SF4P48230 202 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 SCARF1Q14162 830 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 DOK7Q18PE1 504 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 RBM26Q5T8P6 1007 aaKnown RBP8.58□□□□□ -1.04
PMS1-217ENST00000450931 DCAF8Q5TAQ9 597 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 PODNQ7Z5L7 613 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 ZBTB38Q8NAP3 1195 aaPredicted RBP8.58□□□□□ -1.04
PMS1-217ENST00000450931 FAM89AQ96GI7 184 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 XDHP47989 1333 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 UFL1O94874 794 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 USP17L8P0C7I0 530 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 SREBF2Q12772 1141 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 FBXO46Q6PJ61 603 aaPredicted RBP8.58□□□□□ -1.04
PMS1-217ENST00000450931 DLK2Q6UY11 383 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 MYOZ2Q9NPC6 264 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 HDAC9Q9UKV0 1011 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 MED23Q9ULK4 1368 aa8.58□□□□□ -1.04
PMS1-217ENST00000450931 ATP2B4P23634 1241 aa8.57□□□□□ -1.04
PMS1-217ENST00000450931 CCDC152Q4G0S7 254 aa8.57□□□□□ -1.04
PMS1-217ENST00000450931 NF2P35240 595 aa8.57□□□□□ -1.04
PMS1-217ENST00000450931 RALBP1Q15311 655 aa8.57□□□□□ -1.04
PMS1-217ENST00000450931 KCNQ5Q9NR82 932 aa8.57□□□□□ -1.04
PMS1-217ENST00000450931 USP17L3A6NCW0 530 aa8.56□□□□□ -1.04
PMS1-217ENST00000450931 USP17L4A6NCW7 530 aa8.56□□□□□ -1.04
PMS1-217ENST00000450931 PCCAP05165 728 aaPredicted RBP8.56□□□□□ -1.04
PMS1-217ENST00000450931 USP17L1Q7RTZ2 530 aa8.56□□□□□ -1.04
PMS1-217ENST00000450931 CCDC191Q8NCU4 936 aa8.56□□□□□ -1.04
PMS1-217ENST00000450931 ZNF296Q8WUU4 475 aaPredicted RBP8.56□□□□□ -1.04
PMS1-217ENST00000450931 CHMP4AQ9BY43 222 aa8.56□□□□□ -1.04
PMS1-217ENST00000450931 ANKIB1Q9P2G1 1089 aa8.56□□□□□ -1.04
PMS1-217ENST00000450931 GPR25O00155 361 aa8.56□□□□□ -1.04
PMS1-217ENST00000450931 PDE8AO60658 829 aa8.56□□□□□ -1.04
PMS1-217ENST00000450931 ALDH1A1P00352 501 aa8.56□□□□□ -1.04
PMS1-217ENST00000450931 GOLGA2Q08379 1002 aa8.56□□□□□ -1.04
PMS1-217ENST00000450931 ASTN2O75129 1339 aaPredicted RBP8.56□□□□□ -1.04
PMS1-217ENST00000450931 UNCXA6NJT0 531 aa8.55□□□□□ -1.04
PMS1-217ENST00000450931 MYH3P11055 1940 aa8.55□□□□□ -1.04
PMS1-217ENST00000450931 ECM29Q5VYK3 1845 aa8.55□□□□□ -1.04
PMS1-217ENST00000450931 ATP5J2-PTCD1G3V325 749 aa8.55□□□□□ -1.04
PMS1-217ENST00000450931 FKTNO75072 461 aa8.55□□□□□ -1.04
PMS1-217ENST00000450931 TNRC18O15417 2968 aaPredicted RBP8.54□□□□□ -1.04
PMS1-217ENST00000450931 INHBEP58166 350 aa8.54□□□□□ -1.04
PMS1-217ENST00000450931 INTS3Q68E01 1043 aaKnown RBP8.54□□□□□ -1.04
PMS1-217ENST00000450931 APOBEC3FQ8IUX4 373 aaKnown RBP8.54□□□□□ -1.04
PMS1-217ENST00000450931 ANKRD18AQ8IVF6 992 aa8.54□□□□□ -1.04
PMS1-217ENST00000450931 RUNDC1Q96C34 613 aa8.54□□□□□ -1.04
PMS1-217ENST00000450931 CDC5LQ99459 802 aaKnown RBP8.54□□□□□ -1.04
PMS1-217ENST00000450931 STRIP1Q5VSL9 837 aa8.54□□□□□ -1.04
PMS1-217ENST00000450931 ARMC9Q7Z3E5 817 aa8.54□□□□□ -1.04
PMS1-217ENST00000450931 RIC3Q7Z5B4 369 aa8.54□□□□□ -1.04
PMS1-217ENST00000450931 TRIM35Q9UPQ4 493 aa8.54□□□□□ -1.04
PMS1-217ENST00000450931 SPEF2Q9C093 1822 aa8.54□□□□□ -1.04
PMS1-217ENST00000450931 KRT24Q2M2I5 525 aa8.53□□□□□ -1.04
PMS1-217ENST00000450931 OGFOD1Q8N543 542 aa8.53□□□□□ -1.04
PMS1-217ENST00000450931 SEC31BQ9NQW1 1179 aa8.53□□□□□ -1.04
PMS1-217ENST00000450931 CWC25Q9NXE8 425 aaPredicted RBP8.53□□□□□ -1.04
PMS1-217ENST00000450931 MANSC4A6NHS7 340 aaPredicted RBP8.53□□□□□ -1.04
PMS1-217ENST00000450931 TBC1D8O95759 1140 aa8.53□□□□□ -1.04
PMS1-217ENST00000450931 DACT2Q5SW24 774 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms