RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 SP8Q8IXZ3 490 aa18.54■□□□□ 0.56
USP39-206ENST00000448971 ZBTB38Q8NAP3 1195 aaPredicted RBP18.54■□□□□ 0.56
USP39-206ENST00000448971 THSD7BQ9C0I4 1608 aa18.53■□□□□ 0.56
USP39-206ENST00000448971 IRS4O14654 1257 aaPredicted RBP18.53■□□□□ 0.56
USP39-206ENST00000448971 PCCAP05165 728 aaPredicted RBP18.52■□□□□ 0.56
USP39-206ENST00000448971 IGKV5-2P06315 115 aa18.52■□□□□ 0.56
USP39-206ENST00000448971 HSP90B1P14625 803 aaKnown RBP18.52■□□□□ 0.56
USP39-206ENST00000448971 MAP2K2P36507 400 aa18.52■□□□□ 0.56
USP39-206ENST00000448971 GMPSP49915 693 aaPredicted RBP18.52■□□□□ 0.56
USP39-206ENST00000448971 HIRAP54198 1017 aaPredicted RBP18.52■□□□□ 0.56
USP39-206ENST00000448971 SAPCD2Q86UD0 394 aa18.52■□□□□ 0.56
USP39-206ENST00000448971 SUPT20HQ8NEM7 779 aa18.52■□□□□ 0.56
USP39-206ENST00000448971 BCL2L13Q9BXK5 485 aa18.52■□□□□ 0.56
USP39-206ENST00000448971 TMX4Q9H1E5 349 aaPredicted RBP18.52■□□□□ 0.56
USP39-206ENST00000448971 NEURL1BA8MQ27 555 aa18.51■□□□□ 0.55
USP39-206ENST00000448971 F6X3S4 739 aa18.51■□□□□ 0.55
USP39-206ENST00000448971 AOC2O75106 756 aa18.51■□□□□ 0.55
USP39-206ENST00000448971 KIAA2012Q0VF49 1180 aa18.51■□□□□ 0.55
USP39-206ENST00000448971 DPP8Q6V1X1 898 aaPredicted RBP18.51■□□□□ 0.55
USP39-206ENST00000448971 PAXIP1Q6ZW49 1069 aaPredicted RBP18.51■□□□□ 0.55
USP39-206ENST00000448971 DDX46Q7L014 1031 aaKnown RBP18.51■□□□□ 0.55
USP39-206ENST00000448971 MPNDQ8N594 471 aa18.51■□□□□ 0.55
USP39-206ENST00000448971 GRM1Q13255 1194 aa18.5■□□□□ 0.55
USP39-206ENST00000448971 CIAPIN1Q6FI81 312 aa18.5■□□□□ 0.55
USP39-206ENST00000448971 TRMT2AQ8IZ69 625 aaKnown RBP18.5■□□□□ 0.55
USP39-206ENST00000448971 JARID2Q92833 1246 aaPredicted RBP18.5■□□□□ 0.55
USP39-206ENST00000448971 GLIS2Q9BZE0 524 aaPredicted RBP18.5■□□□□ 0.55
USP39-206ENST00000448971 SMC4Q9NTJ3 1288 aa18.5■□□□□ 0.55
USP39-206ENST00000448971 CELF2O95319 508 aaKnown RBP18.49■□□□□ 0.55
USP39-206ENST00000448971 CT47B1P0C2W7 299 aaPredicted RBP18.49■□□□□ 0.55
USP39-206ENST00000448971 MRPL50Q8N5N7 158 aaKnown RBP18.49■□□□□ 0.55
USP39-206ENST00000448971 LINS1Q8NG48 757 aa18.49■□□□□ 0.55
USP39-206ENST00000448971 ZC3H15Q8WU90 426 aaKnown RBP18.49■□□□□ 0.55
USP39-206ENST00000448971 SSH1Q8WYL5 1049 aa18.49■□□□□ 0.55
USP39-206ENST00000448971 HHIPL1Q96JK4 782 aa18.49■□□□□ 0.55
USP39-206ENST00000448971 BEGAINQ9BUH8 593 aa18.49■□□□□ 0.55
USP39-206ENST00000448971 TAF1P21675 1872 aa18.49■□□□□ 0.55
USP39-206ENST00000448971 CDHR2Q9BYE9 1310 aa18.49■□□□□ 0.55
USP39-206ENST00000448971 YDJCA8MPS7 323 aa18.48■□□□□ 0.55
USP39-206ENST00000448971 RAD17O75943 681 aa18.48■□□□□ 0.55
USP39-206ENST00000448971 GRAPQ13588 217 aa18.48■□□□□ 0.55
USP39-206ENST00000448971 ALDH1L2Q3SY69 923 aa18.48■□□□□ 0.55
USP39-206ENST00000448971 SLC4A10Q6U841 1118 aa18.48■□□□□ 0.55
USP39-206ENST00000448971 GRAPLQ8TC17 118 aaPredicted RBP18.48■□□□□ 0.55
USP39-206ENST00000448971 ZBED9Q6R2W3 1325 aa18.48■□□□□ 0.55
USP39-206ENST00000448971 PDE8AO60658 829 aa18.47■□□□□ 0.55
USP39-206ENST00000448971 GCKRQ14397 625 aa18.47■□□□□ 0.55
USP39-206ENST00000448971 TNIP1Q15025 636 aa18.47■□□□□ 0.55
USP39-206ENST00000448971 SF3B3Q15393 1217 aaKnown RBP18.47■□□□□ 0.55
USP39-206ENST00000448971 UBE3BQ7Z3V4 1068 aa18.47■□□□□ 0.55
USP39-206ENST00000448971 TSKSQ9UJT2 592 aa18.47■□□□□ 0.55
USP39-206ENST00000448971 PTPRCP08575 1304 aa18.47■□□□□ 0.55
USP39-206ENST00000448971 SHTN1A0MZ66 631 aa18.46■□□□□ 0.55
USP39-206ENST00000448971 RGS19P49795 217 aa18.46■□□□□ 0.55
USP39-206ENST00000448971 CCDC152Q4G0S7 254 aa18.46■□□□□ 0.55
USP39-206ENST00000448971 CDC37L1Q7L3B6 337 aa18.46■□□□□ 0.55
USP39-206ENST00000448971 TRPM4Q8TD43 1214 aa18.46■□□□□ 0.55
USP39-206ENST00000448971 CCDC85AQ96PX6 553 aaPredicted RBP18.46■□□□□ 0.55
USP39-206ENST00000448971 CNOT7Q9UIV1 285 aaKnown RBP18.46■□□□□ 0.55
USP39-206ENST00000448971 CASP8AP2Q9UKL3 1982 aa18.46■□□□□ 0.55
USP39-206ENST00000448971 CTSWP56202 376 aa18.45■□□□□ 0.54
USP39-206ENST00000448971 FAM161AQ3B820 660 aa18.45■□□□□ 0.54
USP39-206ENST00000448971 BEND3Q5T5X7 828 aa18.45■□□□□ 0.54
USP39-206ENST00000448971 RNF39Q9H2S5 420 aa18.45■□□□□ 0.54
USP39-206ENST00000448971 POLR2AP24928 1970 aaKnown RBP18.44■□□□□ 0.54
USP39-206ENST00000448971 CELF1Q92879 486 aaKnown RBP18.44■□□□□ 0.54
USP39-206ENST00000448971 SRCIN1Q9C0H9 1055 aa18.44■□□□□ 0.54
USP39-206ENST00000448971 LRRC37AA6NMS7 1700 aa18.43■□□□□ 0.54
USP39-206ENST00000448971 DUOX1Q9NRD9 1551 aa18.43■□□□□ 0.54
USP39-206ENST00000448971 CCDC85CA6NKD9 419 aa18.43■□□□□ 0.54
USP39-206ENST00000448971 CA12O43570 354 aa18.43■□□□□ 0.54
USP39-206ENST00000448971 BRPF1P55201 1214 aaPredicted RBP18.43■□□□□ 0.54
USP39-206ENST00000448971 DLK2Q6UY11 383 aa18.43■□□□□ 0.54
USP39-206ENST00000448971 TMC4Q7Z404 712 aa18.43■□□□□ 0.54
USP39-206ENST00000448971 DPF2Q92785 391 aa18.43■□□□□ 0.54
USP39-206ENST00000448971 COL4A1P02462 1669 aa18.43■□□□□ 0.54
USP39-206ENST00000448971 H7C1D1 291 aa18.42■□□□□ 0.54
USP39-206ENST00000448971 H7C1W4 665 aa18.42■□□□□ 0.54
USP39-206ENST00000448971 USP48Q86UV5 1035 aa18.42■□□□□ 0.54
USP39-206ENST00000448971 MICALL2Q8IY33 904 aa18.42■□□□□ 0.54
USP39-206ENST00000448971 ZIC5Q96T25 663 aa18.42■□□□□ 0.54
USP39-206ENST00000448971 ZBTB12Q9Y330 459 aaPredicted RBP18.42■□□□□ 0.54
USP39-206ENST00000448971 MYH3P11055 1940 aa18.42■□□□□ 0.54
USP39-206ENST00000448971 KIF16BQ96L93 1317 aa18.42■□□□□ 0.54
USP39-206ENST00000448971 ALDH1L1O75891 902 aa18.41■□□□□ 0.54
USP39-206ENST00000448971 ZNF408Q9H9D4 720 aa18.41■□□□□ 0.54
USP39-206ENST00000448971 SEC31BQ9NQW1 1179 aa18.41■□□□□ 0.54
USP39-206ENST00000448971 POLLQ9UGP5 575 aa18.41■□□□□ 0.54
USP39-206ENST00000448971 GRM8O00222 908 aa18.4■□□□□ 0.54
USP39-206ENST00000448971 PSMD14O00487 310 aa18.4■□□□□ 0.54
USP39-206ENST00000448971 RARSP54136 660 aaKnown RBP18.4■□□□□ 0.54
USP39-206ENST00000448971 WASHC4Q2M389 1173 aa18.4■□□□□ 0.54
USP39-206ENST00000448971 SAMD7Q7Z3H4 446 aa18.4■□□□□ 0.54
USP39-206ENST00000448971 KCNQ5Q9NR82 932 aa18.4■□□□□ 0.54
USP39-206ENST00000448971 C9orf78Q9NZ63 289 aaPredicted RBP18.4■□□□□ 0.54
USP39-206ENST00000448971 NSFL1CQ9UNZ2 370 aaKnown RBP18.4■□□□□ 0.54
USP39-206ENST00000448971 EGFRP00533 1210 aa18.39■□□□□ 0.53
USP39-206ENST00000448971 CASP7P55210 303 aa18.39■□□□□ 0.53
USP39-206ENST00000448971 CACNB1Q02641 598 aaPredicted RBP18.39■□□□□ 0.53
USP39-206ENST00000448971 MLLT1Q03111 559 aaPredicted RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms