RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 BRCA1P38398 1863 aaKnown RBP16.82■□□□□ 0.28
TM9SF4-204ENST00000442842 SLX4Q8IY92 1834 aa16.82■□□□□ 0.28
TM9SF4-204ENST00000442842 CHRNDQ07001 517 aa16.81■□□□□ 0.28
TM9SF4-204ENST00000442842 G3BP1Q13283 466 aaKnown RBP eCLIP16.81■□□□□ 0.28
TM9SF4-204ENST00000442842 CCDC93Q567U6 631 aa16.81■□□□□ 0.28
TM9SF4-204ENST00000442842 BCL11AQ9H165 835 aa16.81■□□□□ 0.28
TM9SF4-204ENST00000442842 ANKIB1Q9P2G1 1089 aa16.81■□□□□ 0.28
TM9SF4-204ENST00000442842 GOLGB1Q14789 3259 aaKnown RBP16.8■□□□□ 0.28
TM9SF4-204ENST00000442842 CIAO1O76071 339 aa16.8■□□□□ 0.28
TM9SF4-204ENST00000442842 IL15P40933 162 aaPredicted RBP16.8■□□□□ 0.28
TM9SF4-204ENST00000442842 GPSM2P81274 684 aa16.8■□□□□ 0.28
TM9SF4-204ENST00000442842 SP8Q8IXZ3 490 aa16.8■□□□□ 0.28
TM9SF4-204ENST00000442842 HELBQ8NG08 1087 aaPredicted RBP16.8■□□□□ 0.28
TM9SF4-204ENST00000442842 MINPP1Q9UNW1 487 aa16.8■□□□□ 0.28
TM9SF4-204ENST00000442842 MROH5Q6ZUA9 1318 aa16.79■□□□□ 0.28
TM9SF4-204ENST00000442842 TAF5LO75529 589 aa16.79■□□□□ 0.28
TM9SF4-204ENST00000442842 KCNJ4P48050 445 aa16.79■□□□□ 0.28
TM9SF4-204ENST00000442842 HDAC1Q13547 482 aaPredicted RBP16.79■□□□□ 0.28
TM9SF4-204ENST00000442842 GPR162Q16538 588 aa16.79■□□□□ 0.28
TM9SF4-204ENST00000442842 DPP8Q6V1X1 898 aaPredicted RBP16.79■□□□□ 0.28
TM9SF4-204ENST00000442842 ATG9AQ7Z3C6 839 aa16.79■□□□□ 0.28
TM9SF4-204ENST00000442842 RWDD1Q9H446 243 aaPredicted RBP16.79■□□□□ 0.28
TM9SF4-204ENST00000442842 NSFL1CQ9UNZ2 370 aaKnown RBP16.79■□□□□ 0.28
TM9SF4-204ENST00000442842 XDHP47989 1333 aa16.78■□□□□ 0.28
TM9SF4-204ENST00000442842 IGHDP01880 384 aa16.78■□□□□ 0.28
TM9SF4-204ENST00000442842 YBX3P16989 372 aaKnown RBP eCLIP16.78■□□□□ 0.282e-6■■■■□ 21
TM9SF4-204ENST00000442842 HSP90AB4PQ58FF6 505 aa16.78■□□□□ 0.28
TM9SF4-204ENST00000442842 SOGA3Q5TF21 947 aa16.78■□□□□ 0.28
TM9SF4-204ENST00000442842 C7orf43Q8WVR3 580 aa16.78■□□□□ 0.28
TM9SF4-204ENST00000442842 ANKRD2Q9GZV1 360 aa16.78■□□□□ 0.28
TM9SF4-204ENST00000442842 FBXO3Q9UK99 471 aa16.78■□□□□ 0.28
TM9SF4-204ENST00000442842 RIPOR2Q9Y4F9 1068 aa16.78■□□□□ 0.28
TM9SF4-204ENST00000442842 UFL1O94874 794 aa16.77■□□□□ 0.28
TM9SF4-204ENST00000442842 TFCP2Q12800 502 aa16.77■□□□□ 0.28
TM9SF4-204ENST00000442842 MPNDQ8N594 471 aa16.77■□□□□ 0.28
TM9SF4-204ENST00000442842 CCDC136Q96JN2 1154 aa16.77■□□□□ 0.28
TM9SF4-204ENST00000442842 GPR101Q96P66 508 aaPredicted RBP16.77■□□□□ 0.28
TM9SF4-204ENST00000442842 NOP58Q9Y2X3 529 aaKnown RBP16.77■□□□□ 0.28
TM9SF4-204ENST00000442842 C6orf229H3BNL8 230 aa16.76■□□□□ 0.27
TM9SF4-204ENST00000442842 SNAP23O00161 211 aa16.76■□□□□ 0.27
TM9SF4-204ENST00000442842 RASSF7Q02833 373 aa16.76■□□□□ 0.27
TM9SF4-204ENST00000442842 CC2D2BQ6DHV5 1058 aa16.76■□□□□ 0.27
TM9SF4-204ENST00000442842 ERC1Q8IUD2 1116 aa16.76■□□□□ 0.27
TM9SF4-204ENST00000442842 CEP126Q9P2H0 1117 aa16.76■□□□□ 0.27
TM9SF4-204ENST00000442842 GGA1Q9UJY5 639 aa16.76■□□□□ 0.27
TM9SF4-204ENST00000442842 A0A1B0GUL6 1792 aa16.76■□□□□ 0.27
TM9SF4-204ENST00000442842 DUOX1Q9NRD9 1551 aa16.76■□□□□ 0.27
TM9SF4-204ENST00000442842 SASH1O94885 1247 aa16.75■□□□□ 0.27
TM9SF4-204ENST00000442842 ERICH6BQ5W0A0 696 aa16.75■□□□□ 0.27
TM9SF4-204ENST00000442842 B4GALNT3Q6L9W6 998 aa16.75■□□□□ 0.27
TM9SF4-204ENST00000442842 ARHGAP27Q6ZUM4 889 aa16.75■□□□□ 0.27
TM9SF4-204ENST00000442842 RTKN2Q8IZC4 609 aa16.75■□□□□ 0.27
TM9SF4-204ENST00000442842 DCTPP1Q9H773 170 aa16.75■□□□□ 0.27
TM9SF4-204ENST00000442842 IL1RAPL2Q9NP60 686 aa16.75■□□□□ 0.27
TM9SF4-204ENST00000442842 ZNF609O15014 1411 aa16.75■□□□□ 0.27
TM9SF4-204ENST00000442842 SNED1Q8TER0 1413 aa16.75■□□□□ 0.27
TM9SF4-204ENST00000442842 LTBP1Q14766 1721 aa16.74■□□□□ 0.27
TM9SF4-204ENST00000442842 WTIPA6NIX2 430 aaPredicted RBP16.74■□□□□ 0.27
TM9SF4-204ENST00000442842 SMARCA5O60264 1052 aaPredicted RBP16.74■□□□□ 0.27
TM9SF4-204ENST00000442842 RAB11FIP3O75154 756 aa16.74■□□□□ 0.27
TM9SF4-204ENST00000442842 PDE8BO95263 885 aa16.74■□□□□ 0.27
TM9SF4-204ENST00000442842 ATP2B4P23634 1241 aa16.74■□□□□ 0.27
TM9SF4-204ENST00000442842 FKBP4Q02790 459 aaKnown RBP eCLIP16.74■□□□□ 0.27
TM9SF4-204ENST00000442842 PUM3Q15397 648 aaKnown RBP16.74■□□□□ 0.27
TM9SF4-204ENST00000442842 VGLL2Q8N8G2 317 aa16.74■□□□□ 0.27
TM9SF4-204ENST00000442842 TBC1D16Q8TBP0 767 aa16.74■□□□□ 0.27
TM9SF4-204ENST00000442842 RHPN1Q8TCX5 695 aa16.74■□□□□ 0.27
TM9SF4-204ENST00000442842 GCC1Q96CN9 775 aa16.74■□□□□ 0.27
TM9SF4-204ENST00000442842 KIF1BPQ96EK5 621 aa16.74■□□□□ 0.27
TM9SF4-204ENST00000442842 TAOK3Q9H2K8 898 aa16.74■□□□□ 0.27
TM9SF4-204ENST00000442842 PODXL2Q9NZ53 605 aa16.74■□□□□ 0.27
TM9SF4-204ENST00000442842 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.74■□□□□ 0.27
TM9SF4-204ENST00000442842 ARFGEF1Q9Y6D6 1849 aa16.74■□□□□ 0.27
TM9SF4-204ENST00000442842 ZNF804BA4D1E1 1349 aa16.73■□□□□ 0.27
TM9SF4-204ENST00000442842 NFKBIEO00221 500 aa16.73■□□□□ 0.27
TM9SF4-204ENST00000442842 ATP2B3Q16720 1220 aa16.73■□□□□ 0.27
TM9SF4-204ENST00000442842 LRRCC1Q9C099 1032 aa16.73■□□□□ 0.27
TM9SF4-204ENST00000442842 PPP4R2Q9NY27 417 aa16.73■□□□□ 0.27
TM9SF4-204ENST00000442842 ZBTB47Q9UFB7 747 aaPredicted RBP16.73■□□□□ 0.27
TM9SF4-204ENST00000442842 POLLQ9UGP5 575 aa16.73■□□□□ 0.27
TM9SF4-204ENST00000442842 RIMBP2O15034 1052 aa16.72■□□□□ 0.27
TM9SF4-204ENST00000442842 SLC5A1P13866 664 aa16.72■□□□□ 0.27
TM9SF4-204ENST00000442842 KLRK1P26718 216 aa16.72■□□□□ 0.27
TM9SF4-204ENST00000442842 GRIPAP1Q4V328 841 aa16.72■□□□□ 0.27
TM9SF4-204ENST00000442842 SUPT20HQ8NEM7 779 aa16.72■□□□□ 0.27
TM9SF4-204ENST00000442842 ZNF277Q9NRM2 450 aaPredicted RBP16.72■□□□□ 0.27
TM9SF4-204ENST00000442842 LEMD3Q9Y2U8 911 aa16.72■□□□□ 0.27
TM9SF4-204ENST00000442842 A0A1B0GUL7 405 aa16.71■□□□□ 0.27
TM9SF4-204ENST00000442842 IFIT1P09914 478 aaKnown RBP16.71■□□□□ 0.27
TM9SF4-204ENST00000442842 AOC3Q16853 763 aa16.71■□□□□ 0.27
TM9SF4-204ENST00000442842 TNNI3KQ59H18 835 aa16.71■□□□□ 0.27
TM9SF4-204ENST00000442842 ANKRD45Q5TZF3 282 aa16.71■□□□□ 0.27
TM9SF4-204ENST00000442842 LPIN2Q92539 896 aa16.71■□□□□ 0.27
TM9SF4-204ENST00000442842 NEUROD6Q96NK8 337 aa16.71■□□□□ 0.27
TM9SF4-204ENST00000442842 PSMD1Q99460 953 aa16.71■□□□□ 0.27
TM9SF4-204ENST00000442842 EYA3Q99504 573 aa16.71■□□□□ 0.27
TM9SF4-204ENST00000442842 AKAP2Q9Y2D5 859 aa16.71■□□□□ 0.27
TM9SF4-204ENST00000442842 FPGT-TNNI3KV9GXZ4 949 aa16.71■□□□□ 0.27
TM9SF4-204ENST00000442842 MED23Q9ULK4 1368 aa16.7■□□□□ 0.26
TM9SF4-204ENST00000442842 DCAF8L1A6NGE4 600 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms