RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 C9orf131Q5VYM1 1079 aa20.08■□□□□ 0.81
USP39-205ENST00000442708 MPNDQ8N594 471 aa20.08■□□□□ 0.81
USP39-205ENST00000442708 PSMD1Q99460 953 aa20.08■□□□□ 0.81
USP39-205ENST00000442708 PUS3Q9BZE2 481 aaKnown RBP20.08■□□□□ 0.81
USP39-205ENST00000442708 TIAM2Q8IVF5 1701 aa20.07■□□□□ 0.8
USP39-205ENST00000442708 DPP8Q6V1X1 898 aaPredicted RBP20.07■□□□□ 0.8
USP39-205ENST00000442708 RTFDC1Q9BY42 306 aaPredicted RBP20.07■□□□□ 0.8
USP39-205ENST00000442708 LMNB1P20700 586 aa20.06■□□□□ 0.8
USP39-205ENST00000442708 MPHOSPH8Q99549 860 aa20.06■□□□□ 0.8
USP39-205ENST00000442708 RNF181Q9P0P0 153 aa20.06■□□□□ 0.8
USP39-205ENST00000442708 POLLQ9UGP5 575 aa20.06■□□□□ 0.8
USP39-205ENST00000442708 NSFL1CQ9UNZ2 370 aaKnown RBP20.06■□□□□ 0.8
USP39-205ENST00000442708 HDAC5Q9UQL6 1122 aa20.06■□□□□ 0.8
USP39-205ENST00000442708 MTX1Q13505 466 aa20.05■□□□□ 0.8
USP39-205ENST00000442708 GRIPAP1Q4V328 841 aa20.05■□□□□ 0.8
USP39-205ENST00000442708 TAF7LQ5H9L4 462 aa20.05■□□□□ 0.8
USP39-205ENST00000442708 IFFO2Q5TF58 517 aa20.05■□□□□ 0.8
USP39-205ENST00000442708 GPR101Q96P66 508 aaPredicted RBP20.05■□□□□ 0.8
USP39-205ENST00000442708 TMX4Q9H1E5 349 aaPredicted RBP20.05■□□□□ 0.8
USP39-205ENST00000442708 PODXL2Q9NZ53 605 aa20.05■□□□□ 0.8
USP39-205ENST00000442708 PNMA6EA0A0J9YXQ4 647 aa20.04■□□□□ 0.8
USP39-205ENST00000442708 PTPN12Q05209 780 aaKnown RBP20.04■□□□□ 0.8
USP39-205ENST00000442708 LDHAL6AQ6ZMR3 332 aa20.04■□□□□ 0.8
USP39-205ENST00000442708 TBC1D16Q8TBP0 767 aa20.04■□□□□ 0.8
USP39-205ENST00000442708 ZBTB40Q9NUA8 1239 aa20.04■□□□□ 0.8
USP39-205ENST00000442708 DDX19BQ9UMR2 479 aa20.04■□□□□ 0.8
USP39-205ENST00000442708 SUPT16HQ9Y5B9 1047 aaKnown RBP20.04■□□□□ 0.8
USP39-205ENST00000442708 IARSP41252 1262 aaKnown RBP20.03■□□□□ 0.8
USP39-205ENST00000442708 CHRNDQ07001 517 aa20.03■□□□□ 0.8
USP39-205ENST00000442708 LRRC24Q50LG9 513 aa20.03■□□□□ 0.8
USP39-205ENST00000442708 HELBQ8NG08 1087 aaPredicted RBP20.03■□□□□ 0.8
USP39-205ENST00000442708 ANKIB1Q9P2G1 1089 aa20.03■□□□□ 0.8
USP39-205ENST00000442708 RIPOR2Q9Y4F9 1068 aa20.03■□□□□ 0.8
USP39-205ENST00000442708 SNAP23O00161 211 aa20.02■□□□□ 0.8
USP39-205ENST00000442708 SRGAP3O43295 1099 aa20.02■□□□□ 0.8
USP39-205ENST00000442708 AOC3Q16853 763 aa20.02■□□□□ 0.8
USP39-205ENST00000442708 PA2G4Q9UQ80 394 aaKnown RBP20.02■□□□□ 0.8
USP39-205ENST00000442708 XDHP47989 1333 aa20.02■□□□□ 0.79
USP39-205ENST00000442708 C6orf229H3BNL8 230 aa20.01■□□□□ 0.79
USP39-205ENST00000442708 TAF5LO75529 589 aa20.01■□□□□ 0.79
USP39-205ENST00000442708 UFL1O94874 794 aa20.01■□□□□ 0.79
USP39-205ENST00000442708 CNNM1Q9NRU3 951 aa20.01■□□□□ 0.79
USP39-205ENST00000442708 ATP8B2P98198 1209 aa20■□□□□ 0.79
USP39-205ENST00000442708 CEP85Q6P2H3 762 aa20■□□□□ 0.79
USP39-205ENST00000442708 ATG9AQ7Z3C6 839 aa20■□□□□ 0.79
USP39-205ENST00000442708 SUPT20HQ8NEM7 779 aa20■□□□□ 0.79
USP39-205ENST00000442708 GGA1Q9UJY5 639 aa20■□□□□ 0.79
USP39-205ENST00000442708 PPIP5K2O43314 1243 aa19.99■□□□□ 0.79
USP39-205ENST00000442708 KIAA2012Q0VF49 1180 aa19.99■□□□□ 0.79
USP39-205ENST00000442708 POLA2Q14181 598 aa19.99■□□□□ 0.79
USP39-205ENST00000442708 CRBNQ96SW2 442 aa19.99■□□□□ 0.79
USP39-205ENST00000442708 ANKRD2Q9GZV1 360 aa19.99■□□□□ 0.79
USP39-205ENST00000442708 SIL1Q9H173 461 aa19.99■□□□□ 0.79
USP39-205ENST00000442708 EYA2O00167 538 aa19.98■□□□□ 0.79
USP39-205ENST00000442708 RIMBP2O15034 1052 aa19.98■□□□□ 0.79
USP39-205ENST00000442708 ATP2B4P23634 1241 aa19.98■□□□□ 0.79
USP39-205ENST00000442708 KLRK1P26718 216 aa19.98■□□□□ 0.79
USP39-205ENST00000442708 WASHC4Q2M389 1173 aa19.98■□□□□ 0.79
USP39-205ENST00000442708 LARGE2Q8N3Y3 721 aa19.98■□□□□ 0.79
USP39-205ENST00000442708 SSH3Q8TE77 659 aa19.98■□□□□ 0.79
USP39-205ENST00000442708 COPRSQ9NQ92 184 aa19.98■□□□□ 0.79
USP39-205ENST00000442708 IRS2Q9Y4H2 1338 aa19.98■□□□□ 0.79
USP39-205ENST00000442708 TXNRD3Q86VQ6 643 aa19.97■□□□□ 0.79
USP39-205ENST00000442708 SIRT2Q8IXJ6 389 aa19.97■□□□□ 0.79
USP39-205ENST00000442708 VGLL2Q8N8G2 317 aa19.97■□□□□ 0.79
USP39-205ENST00000442708 VPS33BQ9H267 617 aa19.97■□□□□ 0.79
USP39-205ENST00000442708 LEMD3Q9Y2U8 911 aa19.96■□□□□ 0.79
USP39-205ENST00000442708 ZNF804BA4D1E1 1349 aa19.96■□□□□ 0.79
USP39-205ENST00000442708 MROH5Q6ZUA9 1318 aa19.96■□□□□ 0.79
USP39-205ENST00000442708 SCN9AQ15858 1988 aa19.95■□□□□ 0.78
USP39-205ENST00000442708 FZD9O00144 591 aa19.95■□□□□ 0.78
USP39-205ENST00000442708 CIAO1O76071 339 aa19.95■□□□□ 0.78
USP39-205ENST00000442708 METTL24Q5JXM2 366 aa19.95■□□□□ 0.78
USP39-205ENST00000442708 EYA3Q99504 573 aa19.95■□□□□ 0.78
USP39-205ENST00000442708 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.95■□□□□ 0.78
USP39-205ENST00000442708 ZNF541Q9H0D2 1346 aa19.95■□□□□ 0.78
USP39-205ENST00000442708 YDJCA8MPS7 323 aa19.94■□□□□ 0.78
USP39-205ENST00000442708 DOK7Q18PE1 504 aa19.94■□□□□ 0.78
USP39-205ENST00000442708 ZC3H12CQ9C0D7 883 aaKnown RBP19.94■□□□□ 0.78
USP39-205ENST00000442708 MED23Q9ULK4 1368 aa19.94■□□□□ 0.78
USP39-205ENST00000442708 NIM1KQ8IY84 436 aa19.93■□□□□ 0.78
USP39-205ENST00000442708 JDP2Q8WYK2 163 aa19.93■□□□□ 0.78
USP39-205ENST00000442708 CHMP4BQ9H444 224 aaKnown RBP19.93■□□□□ 0.78
USP39-205ENST00000442708 DBNDD1Q9H9R9 158 aa19.93■□□□□ 0.78
USP39-205ENST00000442708 FBXO3Q9UK99 471 aa19.93■□□□□ 0.78
USP39-205ENST00000442708 ZC3H4Q9UPT8 1303 aaKnown RBP19.93■□□□□ 0.78
USP39-205ENST00000442708 PDE8BO95263 885 aa19.92■□□□□ 0.78
USP39-205ENST00000442708 KCNJ4P48050 445 aa19.92■□□□□ 0.78
USP39-205ENST00000442708 KCNQ5Q9NR82 932 aa19.92■□□□□ 0.78
USP39-205ENST00000442708 ZNF646O15015 1829 aaPredicted RBP19.92■□□□□ 0.78
USP39-205ENST00000442708 ECE2O60344 883 aa19.91■□□□□ 0.78
USP39-205ENST00000442708 IL15P40933 162 aaPredicted RBP19.91■□□□□ 0.78
USP39-205ENST00000442708 IRX6P78412 446 aaPredicted RBP19.91■□□□□ 0.78
USP39-205ENST00000442708 C15orf52Q6ZUT6 534 aaKnown RBP19.91■□□□□ 0.78
USP39-205ENST00000442708 RPAP2Q8IXW5 612 aaPredicted RBP19.91■□□□□ 0.78
USP39-205ENST00000442708 ZNF526Q8TF50 670 aaPredicted RBP19.91■□□□□ 0.78
USP39-205ENST00000442708 ZNRF3Q9ULT6 936 aa19.91■□□□□ 0.78
USP39-205ENST00000442708 PCDHB15Q9Y5E8 787 aa19.91■□□□□ 0.78
USP39-205ENST00000442708 PSME4Q14997 1843 aa19.9■□□□□ 0.78
USP39-205ENST00000442708 GLTPD2A6NH11 291 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms