RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 TTC22Q5TAA0 569 aa11.16□□□□□ -0.62
NR1I3-211ENST00000442691 PDCD7Q8N8D1 485 aaKnown RBP11.16□□□□□ -0.62
NR1I3-211ENST00000442691 FAM89AQ96GI7 184 aa11.16□□□□□ -0.62
NR1I3-211ENST00000442691 ARXQ96QS3 562 aa11.16□□□□□ -0.62
NR1I3-211ENST00000442691 CARMIL3Q8ND23 1372 aa11.16□□□□□ -0.62
NR1I3-211ENST00000442691 ERC2O15083 957 aa11.15□□□□□ -0.62
NR1I3-211ENST00000442691 APBA3O96018 575 aa11.15□□□□□ -0.62
NR1I3-211ENST00000442691 GPTP24298 496 aa11.15□□□□□ -0.62
NR1I3-211ENST00000442691 RFC4P35249 363 aa11.15□□□□□ -0.62
NR1I3-211ENST00000442691 IRX5P78411 483 aaPredicted RBP11.15□□□□□ -0.62
NR1I3-211ENST00000442691 IFIT5Q13325 482 aaKnown RBP11.15□□□□□ -0.62
NR1I3-211ENST00000442691 TTLL11Q8NHH1 800 aa11.15□□□□□ -0.62
NR1I3-211ENST00000442691 MYH3P11055 1940 aa11.14□□□□□ -0.63
NR1I3-211ENST00000442691 EYA2O00167 538 aa11.14□□□□□ -0.63
NR1I3-211ENST00000442691 CCDC152Q4G0S7 254 aa11.14□□□□□ -0.63
NR1I3-211ENST00000442691 SUSD4Q5VX71 490 aa11.14□□□□□ -0.63
NR1I3-211ENST00000442691 POTEHQ6S545 545 aa11.14□□□□□ -0.63
NR1I3-211ENST00000442691 SETDB2Q96T68 719 aa11.14□□□□□ -0.63
NR1I3-211ENST00000442691 BCL2L12Q9HB09 334 aa11.14□□□□□ -0.63
NR1I3-211ENST00000442691 ABCC12Q96J65 1359 aa11.14□□□□□ -0.63
NR1I3-211ENST00000442691 QSER1Q2KHR3 1735 aa11.13□□□□□ -0.63
NR1I3-211ENST00000442691 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.13□□□□□ -0.63
NR1I3-211ENST00000442691 ANKRD18BA2A2Z9 1011 aa11.13□□□□□ -0.63
NR1I3-211ENST00000442691 GLRX3O76003 335 aaKnown RBP11.13□□□□□ -0.63
NR1I3-211ENST00000442691 SASH1O94885 1247 aa11.13□□□□□ -0.63
NR1I3-211ENST00000442691 SF3B3Q15393 1217 aaKnown RBP11.13□□□□□ -0.63
NR1I3-211ENST00000442691 USPL1Q5W0Q7 1092 aa11.13□□□□□ -0.63
NR1I3-211ENST00000442691 TPTE2Q6XPS3 522 aa11.13□□□□□ -0.63
NR1I3-211ENST00000442691 SKAP1Q86WV1 359 aa11.13□□□□□ -0.63
NR1I3-211ENST00000442691 CCDC125Q86Z20 511 aa11.13□□□□□ -0.63
NR1I3-211ENST00000442691 MICALL2Q8IY33 904 aa11.13□□□□□ -0.63
NR1I3-211ENST00000442691 DCBLD2Q96PD2 775 aa11.13□□□□□ -0.63
NR1I3-211ENST00000442691 GPHNQ9NQX3 736 aaPredicted RBP11.13□□□□□ -0.63
NR1I3-211ENST00000442691 AKAP2Q9Y2D5 859 aa11.13□□□□□ -0.63
NR1I3-211ENST00000442691 DDX60Q8IY21 1712 aaKnown RBP11.12□□□□□ -0.63
NR1I3-211ENST00000442691 CDC45O75419 566 aa11.12□□□□□ -0.63
NR1I3-211ENST00000442691 IFIT2P09913 472 aaKnown RBP11.12□□□□□ -0.63
NR1I3-211ENST00000442691 CASC1Q6TDU7 716 aa11.12□□□□□ -0.63
NR1I3-211ENST00000442691 UPF2Q9HAU5 1272 aaKnown RBP11.12□□□□□ -0.63
NR1I3-211ENST00000442691 PA2G4Q9UQ80 394 aaKnown RBP11.12□□□□□ -0.63
NR1I3-211ENST00000442691 ZNF609O15014 1411 aa11.11□□□□□ -0.63
NR1I3-211ENST00000442691 APBB1O00213 710 aa11.11□□□□□ -0.63
NR1I3-211ENST00000442691 EPB41L2O43491 1005 aaKnown RBP11.11□□□□□ -0.63
NR1I3-211ENST00000442691 SMARCA5O60264 1052 aaPredicted RBP11.11□□□□□ -0.63
NR1I3-211ENST00000442691 GSPT1P15170 499 aaKnown RBP11.11□□□□□ -0.63
NR1I3-211ENST00000442691 PLCG2P16885 1265 aa11.11□□□□□ -0.63
NR1I3-211ENST00000442691 ITGA6P23229 1130 aa11.11□□□□□ -0.63
NR1I3-211ENST00000442691 KCNQ4P56696 695 aa11.11□□□□□ -0.63
NR1I3-211ENST00000442691 TNNI3KQ59H18 835 aa11.11□□□□□ -0.63
NR1I3-211ENST00000442691 TBC1D9BQ66K14 1250 aa11.11□□□□□ -0.63
NR1I3-211ENST00000442691 ATG9AQ7Z3C6 839 aa11.11□□□□□ -0.63
NR1I3-211ENST00000442691 CDC5LQ99459 802 aaKnown RBP11.11□□□□□ -0.63
NR1I3-211ENST00000442691 ECHDC1Q9NTX5 307 aa11.11□□□□□ -0.63
NR1I3-211ENST00000442691 CHMP3Q9Y3E7 222 aa11.11□□□□□ -0.63
NR1I3-211ENST00000442691 RBM19Q9Y4C8 960 aaKnown RBP11.11□□□□□ -0.63
NR1I3-211ENST00000442691 FPGT-TNNI3KV9GXZ4 949 aa11.11□□□□□ -0.63
NR1I3-211ENST00000442691 RFX7Q2KHR2 1363 aa11.11□□□□□ -0.63
NR1I3-211ENST00000442691 MROH5Q6ZUA9 1318 aa11.1□□□□□ -0.63
NR1I3-211ENST00000442691 TUBGCP6Q96RT7 1819 aa11.1□□□□□ -0.63
NR1I3-211ENST00000442691 G3V3G9 751 aa11.1□□□□□ -0.63
NR1I3-211ENST00000442691 GYS1P13807 737 aa11.1□□□□□ -0.63
NR1I3-211ENST00000442691 TAF7LQ5H9L4 462 aa11.1□□□□□ -0.63
NR1I3-211ENST00000442691 NBPF5PQ86XG9 351 aaPredicted RBP11.1□□□□□ -0.63
NR1I3-211ENST00000442691 C16orf71Q8IYS4 520 aaPredicted RBP11.1□□□□□ -0.63
NR1I3-211ENST00000442691 NLGN1Q8N2Q7 840 aa11.1□□□□□ -0.63
NR1I3-211ENST00000442691 PI4K2BQ8TCG2 481 aa11.1□□□□□ -0.63
NR1I3-211ENST00000442691 CAMKK2Q96RR4 588 aa11.1□□□□□ -0.63
NR1I3-211ENST00000442691 IL1RAPL2Q9NP60 686 aa11.1□□□□□ -0.63
NR1I3-211ENST00000442691 CEP126Q9P2H0 1117 aa11.1□□□□□ -0.63
NR1I3-211ENST00000442691 BOLA1Q9Y3E2 137 aa11.1□□□□□ -0.63
NR1I3-211ENST00000442691 TULP1O00294 542 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-211ENST00000442691 TM4SF1P30408 202 aa11.09□□□□□ -0.63
NR1I3-211ENST00000442691 BAG6P46379 1132 aa11.09□□□□□ -0.63
NR1I3-211ENST00000442691 SF3B2Q13435 895 aaKnown RBP11.09□□□□□ -0.63
NR1I3-211ENST00000442691 CAMK2BQ13554 666 aa11.09□□□□□ -0.63
NR1I3-211ENST00000442691 RTL5Q5HYW3 569 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-211ENST00000442691 AACSQ86V21 672 aa11.09□□□□□ -0.63
NR1I3-211ENST00000442691 IL27Q8NEV9 243 aa11.09□□□□□ -0.63
NR1I3-211ENST00000442691 OTUD7AQ8TE49 926 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-211ENST00000442691 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.09□□□□□ -0.63
NR1I3-211ENST00000442691 JARID2Q92833 1246 aaPredicted RBP11.09□□□□□ -0.63
NR1I3-211ENST00000442691 SIL1Q9H173 461 aa11.09□□□□□ -0.63
NR1I3-211ENST00000442691 GREM2Q9H772 168 aa11.09□□□□□ -0.63
NR1I3-211ENST00000442691 SRP68Q9UHB9 627 aaKnown RBP11.09□□□□□ -0.63
NR1I3-211ENST00000442691 RIPOR2Q9Y4F9 1068 aa11.09□□□□□ -0.63
NR1I3-211ENST00000442691 SPEF2Q9C093 1822 aa11.08□□□□□ -0.64
NR1I3-211ENST00000442691 ATP5JP18859 108 aa11.08□□□□□ -0.64
NR1I3-211ENST00000442691 SDSP20132 328 aa11.08□□□□□ -0.64
NR1I3-211ENST00000442691 GTF2E1P29083 439 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-211ENST00000442691 TFCP2Q12800 502 aa11.08□□□□□ -0.64
NR1I3-211ENST00000442691 PPP1R15BQ5SWA1 713 aa11.08□□□□□ -0.64
NR1I3-211ENST00000442691 LDHAL6AQ6ZMR3 332 aa11.08□□□□□ -0.64
NR1I3-211ENST00000442691 AMIGO3Q86WK7 504 aa11.08□□□□□ -0.64
NR1I3-211ENST00000442691 CNTROBQ8N137 903 aa11.08□□□□□ -0.64
NR1I3-211ENST00000442691 EAF2Q96CJ1 260 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-211ENST00000442691 ZNF512BQ96KM6 892 aaPredicted RBP11.08□□□□□ -0.64
NR1I3-211ENST00000442691 NLRP3Q96P20 1036 aa11.08□□□□□ -0.64
NR1I3-211ENST00000442691 TFCP2L1Q9NZI6 479 aa11.08□□□□□ -0.64
NR1I3-211ENST00000442691 NRXN2Q9P2S2 1712 aa11.07□□□□□ -0.64
NR1I3-211ENST00000442691 HIP1O00291 1037 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms