RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 CIAO1O76071 339 aa14.39□□□□□ -0.11
HDAC8-214ENST00000439122 TCIRG1Q13488 830 aa14.39□□□□□ -0.11
HDAC8-214ENST00000439122 FAM173BQ6P4H8 233 aa14.39□□□□□ -0.11
HDAC8-214ENST00000439122 FAM184AQ8NB25 1140 aa14.39□□□□□ -0.11
HDAC8-214ENST00000439122 ISCA1Q9BUE6 129 aa14.39□□□□□ -0.11
HDAC8-214ENST00000439122 LRRC2Q9BYS8 371 aa14.39□□□□□ -0.11
HDAC8-214ENST00000439122 HELLSQ9NRZ9 838 aa14.39□□□□□ -0.11
HDAC8-214ENST00000439122 ATG3Q9NT62 314 aa14.39□□□□□ -0.11
HDAC8-214ENST00000439122 CEP126Q9P2H0 1117 aa14.39□□□□□ -0.11
HDAC8-214ENST00000439122 ASAP1Q9ULH1 1129 aa14.39□□□□□ -0.11
HDAC8-214ENST00000439122 SHANK3Q9BYB0 1731 aa14.39□□□□□ -0.11
HDAC8-214ENST00000439122 KIF6Q6ZMV9 814 aa14.38□□□□□ -0.11
HDAC8-214ENST00000439122 GTF3C6Q969F1 213 aa14.38□□□□□ -0.11
HDAC8-214ENST00000439122 NOL7Q9UMY1 257 aaKnown RBP14.38□□□□□ -0.11
HDAC8-214ENST00000439122 JAK2O60674 1132 aa14.38□□□□□ -0.11
HDAC8-214ENST00000439122 DNAJC10Q8IXB1 793 aa14.38□□□□□ -0.11
HDAC8-214ENST00000439122 FAM89AQ96GI7 184 aa14.38□□□□□ -0.11
HDAC8-214ENST00000439122 FKBP4Q02790 459 aaKnown RBP eCLIP14.37□□□□□ -0.11
HDAC8-214ENST00000439122 GORABQ5T7V8 394 aa14.37□□□□□ -0.11
HDAC8-214ENST00000439122 GIMAP6Q6P9H5 292 aa14.37□□□□□ -0.11
HDAC8-214ENST00000439122 STOX1Q6ZVD7 989 aa14.37□□□□□ -0.11
HDAC8-214ENST00000439122 PIGBQ92521 554 aa14.37□□□□□ -0.11
HDAC8-214ENST00000439122 BRF1Q92994 677 aa14.37□□□□□ -0.11
HDAC8-214ENST00000439122 ABCA3Q99758 1704 aa14.37□□□□□ -0.11
HDAC8-214ENST00000439122 HCLS1P14317 486 aaPredicted RBP14.37□□□□□ -0.11
HDAC8-214ENST00000439122 TAF7LQ5H9L4 462 aa14.37□□□□□ -0.11
HDAC8-214ENST00000439122 ZMYM1Q5SVZ6 1142 aa14.37□□□□□ -0.11
HDAC8-214ENST00000439122 TTC6Q86TZ1 520 aa14.37□□□□□ -0.11
HDAC8-214ENST00000439122 DSCC1Q9BVC3 393 aa14.37□□□□□ -0.11
HDAC8-214ENST00000439122 RNF113AO15541 343 aaKnown RBP14.36□□□□□ -0.11
HDAC8-214ENST00000439122 STARD3NLO95772 234 aa14.36□□□□□ -0.11
HDAC8-214ENST00000439122 HMGB1P09429 215 aaKnown RBP14.36□□□□□ -0.11
HDAC8-214ENST00000439122 TEX13AQ9BXU3 409 aaPredicted RBP14.36□□□□□ -0.11
HDAC8-214ENST00000439122 CCDC39Q9UFE4 941 aa14.36□□□□□ -0.11
HDAC8-214ENST00000439122 PTMAP06454 111 aaKnown RBP14.36□□□□□ -0.11
HDAC8-214ENST00000439122 HSPD1P10809 573 aaKnown RBP14.36□□□□□ -0.11
HDAC8-214ENST00000439122 CCDC158Q5M9N0 1113 aa14.36□□□□□ -0.11
HDAC8-214ENST00000439122 DHX32Q7L7V1 743 aaKnown RBP14.36□□□□□ -0.11
HDAC8-214ENST00000439122 DDX11Q96FC9 970 aa14.36□□□□□ -0.11
HDAC8-214ENST00000439122 BTG4Q9NY30 223 aa14.36□□□□□ -0.11
HDAC8-214ENST00000439122 TOGARAM1Q9Y4F4 1720 aa14.36□□□□□ -0.11
HDAC8-214ENST00000439122 KAT6BQ8WYB5 2073 aa14.35□□□□□ -0.11
HDAC8-214ENST00000439122 MAST3O60307 1309 aa14.35□□□□□ -0.11
HDAC8-214ENST00000439122 UVSSAQ2YD98 709 aa14.35□□□□□ -0.11
HDAC8-214ENST00000439122 TTC39AQ5SRH9 613 aa14.35□□□□□ -0.11
HDAC8-214ENST00000439122 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.35□□□□□ -0.11
HDAC8-214ENST00000439122 TFIP11Q9UBB9 837 aaKnown RBP14.35□□□□□ -0.11
HDAC8-214ENST00000439122 AKAP2Q9Y2D5 859 aa14.35□□□□□ -0.11
HDAC8-214ENST00000439122 STRCQ7RTU9 1775 aa14.35□□□□□ -0.11
HDAC8-214ENST00000439122 H3BQV1 296 aa14.35□□□□□ -0.11
HDAC8-214ENST00000439122 ADORA1P30542 326 aa14.35□□□□□ -0.11
HDAC8-214ENST00000439122 SCRN1Q12765 414 aa14.35□□□□□ -0.11
HDAC8-214ENST00000439122 TRIM28Q13263 835 aaKnown RBP14.35□□□□□ -0.11
HDAC8-214ENST00000439122 IFIT5Q13325 482 aaKnown RBP14.35□□□□□ -0.11
HDAC8-214ENST00000439122 IFFO2Q5TF58 517 aa14.35□□□□□ -0.11
HDAC8-214ENST00000439122 VSIG10Q8N0Z9 540 aa14.35□□□□□ -0.11
HDAC8-214ENST00000439122 XAGE2Q96GT9 111 aa14.35□□□□□ -0.11
HDAC8-214ENST00000439122 SCAND2PQ9GZW5 306 aaPredicted RBP14.35□□□□□ -0.11
HDAC8-214ENST00000439122 ZKSCAN5Q9Y2L8 839 aa14.35□□□□□ -0.11
HDAC8-214ENST00000439122 ELP1O95163 1332 aa14.34□□□□□ -0.11
HDAC8-214ENST00000439122 A0A0G2JLW4 131 aa14.34□□□□□ -0.11
HDAC8-214ENST00000439122 GOLGA6L4A6NEF3 574 aa14.34□□□□□ -0.11
HDAC8-214ENST00000439122 PCCAP05165 728 aaPredicted RBP14.34□□□□□ -0.11
HDAC8-214ENST00000439122 TICAM2Q86XR7 235 aa14.34□□□□□ -0.11
HDAC8-214ENST00000439122 ZBTB38Q8NAP3 1195 aaPredicted RBP14.34□□□□□ -0.11
HDAC8-214ENST00000439122 SPATA32Q96LK8 384 aa14.34□□□□□ -0.11
HDAC8-214ENST00000439122 USP25Q9UHP3 1055 aa14.34□□□□□ -0.11
HDAC8-214ENST00000439122 M0R2C6 588 aa14.33□□□□□ -0.11
HDAC8-214ENST00000439122 GPTP24298 496 aa14.33□□□□□ -0.11
HDAC8-214ENST00000439122 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.33□□□□□ -0.11
HDAC8-214ENST00000439122 E7EWF7 191 aa14.33□□□□□ -0.12
HDAC8-214ENST00000439122 APOBRQ0VD83 1088 aa14.33□□□□□ -0.12
HDAC8-214ENST00000439122 SYNE4Q8N205 404 aa14.33□□□□□ -0.12
HDAC8-214ENST00000439122 NAP1L2Q9ULW6 460 aaPredicted RBP14.33□□□□□ -0.12
HDAC8-214ENST00000439122 MAP3K15Q6ZN16 1313 aa14.33□□□□□ -0.12
HDAC8-214ENST00000439122 HLFQ16534 295 aa14.32□□□□□ -0.12
HDAC8-214ENST00000439122 WASHC4Q2M389 1173 aa14.32□□□□□ -0.12
HDAC8-214ENST00000439122 LRRFIP1Q32MZ4 808 aaKnown RBP14.32□□□□□ -0.12
HDAC8-214ENST00000439122 OSBP2Q969R2 916 aa14.32□□□□□ -0.12
HDAC8-214ENST00000439122 FUCA2Q9BTY2 467 aa14.32□□□□□ -0.12
HDAC8-214ENST00000439122 FBXO3Q9UK99 471 aa14.32□□□□□ -0.12
HDAC8-214ENST00000439122 PFKFB2O60825 505 aa14.32□□□□□ -0.12
HDAC8-214ENST00000439122 LIG1P18858 919 aa14.32□□□□□ -0.12
HDAC8-214ENST00000439122 GIGYF2Q6Y7W6 1299 aaKnown RBP14.32□□□□□ -0.12
HDAC8-214ENST00000439122 CHST3Q7LGC8 479 aa14.32□□□□□ -0.12
HDAC8-214ENST00000439122 LEO1Q8WVC0 666 aaPredicted RBP14.32□□□□□ -0.12
HDAC8-214ENST00000439122 PLA2G12BQ9BX93 195 aa14.32□□□□□ -0.12
HDAC8-214ENST00000439122 LAMA4Q16363 1823 aa14.32□□□□□ -0.12
HDAC8-214ENST00000439122 CSF1RP07333 972 aa14.31□□□□□ -0.12
HDAC8-214ENST00000439122 MCM5P33992 734 aa14.31□□□□□ -0.12
HDAC8-214ENST00000439122 EXOSC10Q01780 885 aaKnown RBP14.31□□□□□ -0.12
HDAC8-214ENST00000439122 CAMK4Q16566 473 aa14.31□□□□□ -0.12
HDAC8-214ENST00000439122 TTLL5Q6EMB2 1281 aa14.31□□□□□ -0.12
HDAC8-214ENST00000439122 SYTL4Q96C24 671 aaPredicted RBP14.31□□□□□ -0.12
HDAC8-214ENST00000439122 NUP62CLQ9H1M0 184 aa14.31□□□□□ -0.12
HDAC8-214ENST00000439122 ZNF500O60304 480 aaPredicted RBP14.31□□□□□ -0.12
HDAC8-214ENST00000439122 ADCY5O95622 1261 aa14.31□□□□□ -0.12
HDAC8-214ENST00000439122 CCDC192P0DO97 292 aa14.31□□□□□ -0.12
HDAC8-214ENST00000439122 CCT2P78371 535 aaKnown RBP14.31□□□□□ -0.12
HDAC8-214ENST00000439122 PLCB2Q00722 1185 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms