RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 GPSM2P81274 684 aa21.15■□□□□ 0.98
TARDBP-203ENST00000439080 C9orf131Q5VYM1 1079 aa21.15■□□□□ 0.98
TARDBP-203ENST00000439080 C1orf115Q9H7X2 142 aa21.15■□□□□ 0.98
TARDBP-203ENST00000439080 ZNF277Q9NRM2 450 aaPredicted RBP21.15■□□□□ 0.98
TARDBP-203ENST00000439080 RNF181Q9P0P0 153 aa21.15■□□□□ 0.98
TARDBP-203ENST00000439080 DDX19BQ9UMR2 479 aa21.15■□□□□ 0.98
TARDBP-203ENST00000439080 NSFL1CQ9UNZ2 370 aaKnown RBP21.14■□□□□ 0.98
TARDBP-203ENST00000439080 RTFDC1Q9BY42 306 aaPredicted RBP21.13■□□□□ 0.97
TARDBP-203ENST00000439080 ANKIB1Q9P2G1 1089 aa21.13■□□□□ 0.97
TARDBP-203ENST00000439080 MINPP1Q9UNW1 487 aa21.13■□□□□ 0.97
TARDBP-203ENST00000439080 XDHP47989 1333 aa21.13■□□□□ 0.97
TARDBP-203ENST00000439080 IARSP41252 1262 aaKnown RBP21.12■□□□□ 0.97
TARDBP-203ENST00000439080 KLHDC4Q8TBB5 520 aa21.12■□□□□ 0.97
TARDBP-203ENST00000439080 PODXL2Q9NZ53 605 aa21.12■□□□□ 0.97
TARDBP-203ENST00000439080 RFX5P48382 616 aaPredicted RBP21.11■□□□□ 0.97
TARDBP-203ENST00000439080 MTX1Q13505 466 aa21.11■□□□□ 0.97
TARDBP-203ENST00000439080 LDHAL6AQ6ZMR3 332 aa21.11■□□□□ 0.97
TARDBP-203ENST00000439080 SUPT20HQ8NEM7 779 aa21.11■□□□□ 0.97
TARDBP-203ENST00000439080 CNNM1Q9NRU3 951 aa21.11■□□□□ 0.97
TARDBP-203ENST00000439080 SRGAP3O43295 1099 aa21.1■□□□□ 0.97
TARDBP-203ENST00000439080 UFL1O94874 794 aa21.1■□□□□ 0.97
TARDBP-203ENST00000439080 CHRNDQ07001 517 aa21.1■□□□□ 0.97
TARDBP-203ENST00000439080 TBC1D16Q8TBP0 767 aa21.1■□□□□ 0.97
TARDBP-203ENST00000439080 PUS3Q9BZE2 481 aaKnown RBP21.1■□□□□ 0.97
TARDBP-203ENST00000439080 POLLQ9UGP5 575 aa21.1■□□□□ 0.97
TARDBP-203ENST00000439080 GGA1Q9UJY5 639 aa21.1■□□□□ 0.97
TARDBP-203ENST00000439080 PSME4Q14997 1843 aa21.09■□□□□ 0.97
TARDBP-203ENST00000439080 C6orf229H3BNL8 230 aa21.09■□□□□ 0.97
TARDBP-203ENST00000439080 PPIP5K2O43314 1243 aa21.09■□□□□ 0.97
TARDBP-203ENST00000439080 YY1P25490 414 aa21.09■□□□□ 0.97
TARDBP-203ENST00000439080 PTPN12Q05209 780 aaKnown RBP21.09■□□□□ 0.97
TARDBP-203ENST00000439080 AOC3Q16853 763 aa21.09■□□□□ 0.97
TARDBP-203ENST00000439080 GPR101Q96P66 508 aaPredicted RBP21.09■□□□□ 0.97
TARDBP-203ENST00000439080 ANKRD2Q9GZV1 360 aa21.09■□□□□ 0.97
TARDBP-203ENST00000439080 CHMP4BQ9H444 224 aaKnown RBP21.09■□□□□ 0.97
TARDBP-203ENST00000439080 ZC3H4Q9UPT8 1303 aaKnown RBP21.08■□□□□ 0.97
TARDBP-203ENST00000439080 ARAP2Q8WZ64 1704 aa21.08■□□□□ 0.97
TARDBP-203ENST00000439080 PNMA6EA0A0J9YXQ4 647 aa21.08■□□□□ 0.96
TARDBP-203ENST00000439080 LRRC24Q50LG9 513 aa21.08■□□□□ 0.96
TARDBP-203ENST00000439080 LARGE2Q8N3Y3 721 aa21.08■□□□□ 0.96
TARDBP-203ENST00000439080 ZBTB40Q9NUA8 1239 aa21.08■□□□□ 0.96
TARDBP-203ENST00000439080 ATP2B4P23634 1241 aa21.07■□□□□ 0.96
TARDBP-203ENST00000439080 KIAA2012Q0VF49 1180 aa21.07■□□□□ 0.96
TARDBP-203ENST00000439080 EYA3Q99504 573 aa21.07■□□□□ 0.96
TARDBP-203ENST00000439080 SIL1Q9H173 461 aa21.07■□□□□ 0.96
TARDBP-203ENST00000439080 SUPT16HQ9Y5B9 1047 aaKnown RBP21.07■□□□□ 0.96
TARDBP-203ENST00000439080 SCN9AQ15858 1988 aa21.06■□□□□ 0.96
TARDBP-203ENST00000439080 CEP85Q6P2H3 762 aa21.06■□□□□ 0.96
TARDBP-203ENST00000439080 HELBQ8NG08 1087 aaPredicted RBP21.06■□□□□ 0.96
TARDBP-203ENST00000439080 VPS33BQ9H267 617 aa21.06■□□□□ 0.96
TARDBP-203ENST00000439080 COPRSQ9NQ92 184 aa21.06■□□□□ 0.96
TARDBP-203ENST00000439080 PA2G4Q9UQ80 394 aaKnown RBP21.06■□□□□ 0.96
TARDBP-203ENST00000439080 RIPOR2Q9Y4F9 1068 aa21.06■□□□□ 0.96
TARDBP-203ENST00000439080 MROH5Q6ZUA9 1318 aa21.06■□□□□ 0.96
TARDBP-203ENST00000439080 MED23Q9ULK4 1368 aa21.06■□□□□ 0.96
TARDBP-203ENST00000439080 ZNF646O15015 1829 aaPredicted RBP21.05■□□□□ 0.96
TARDBP-203ENST00000439080 EYA2O00167 538 aa21.05■□□□□ 0.96
TARDBP-203ENST00000439080 TAF5LO75529 589 aa21.05■□□□□ 0.96
TARDBP-203ENST00000439080 KCNJ4P48050 445 aa21.05■□□□□ 0.96
TARDBP-203ENST00000439080 WASHC4Q2M389 1173 aa21.05■□□□□ 0.96
TARDBP-203ENST00000439080 ZNF804BA4D1E1 1349 aa21.05■□□□□ 0.96
TARDBP-203ENST00000439080 WTIPA6NIX2 430 aaPredicted RBP21.04■□□□□ 0.96
TARDBP-203ENST00000439080 RIMBP2O15034 1052 aa21.04■□□□□ 0.96
TARDBP-203ENST00000439080 METTL24Q5JXM2 366 aa21.04■□□□□ 0.96
TARDBP-203ENST00000439080 NIM1KQ8IY84 436 aa21.04■□□□□ 0.96
TARDBP-203ENST00000439080 JDP2Q8WYK2 163 aa21.04■□□□□ 0.96
TARDBP-203ENST00000439080 CRBNQ96SW2 442 aa21.04■□□□□ 0.96
TARDBP-203ENST00000439080 LEMD3Q9Y2U8 911 aa21.04■□□□□ 0.96
TARDBP-203ENST00000439080 MYH13Q9UKX3 1938 aa21.04■□□□□ 0.96
TARDBP-203ENST00000439080 CIAO1O76071 339 aa21.03■□□□□ 0.96
TARDBP-203ENST00000439080 ATP8B2P98198 1209 aa21.03■□□□□ 0.96
TARDBP-203ENST00000439080 POLA2Q14181 598 aa21.03■□□□□ 0.96
TARDBP-203ENST00000439080 SSH3Q8TE77 659 aa21.03■□□□□ 0.96
TARDBP-203ENST00000439080 FBXO3Q9UK99 471 aa21.03■□□□□ 0.96
TARDBP-203ENST00000439080 ATG9AQ7Z3C6 839 aa21.02■□□□□ 0.96
TARDBP-203ENST00000439080 VGLL2Q8N8G2 317 aa21.02■□□□□ 0.96
TARDBP-203ENST00000439080 WDR90Q96KV7 1748 aa21.01■□□□□ 0.95
TARDBP-203ENST00000439080 ZNF541Q9H0D2 1346 aa21.01■□□□□ 0.95
TARDBP-203ENST00000439080 SNAP23O00161 211 aa21.01■□□□□ 0.95
TARDBP-203ENST00000439080 KLRK1P26718 216 aa21.01■□□□□ 0.95
TARDBP-203ENST00000439080 ZC3H12CQ9C0D7 883 aaKnown RBP21.01■□□□□ 0.95
TARDBP-203ENST00000439080 DBNDD1Q9H9R9 158 aa21.01■□□□□ 0.95
TARDBP-203ENST00000439080 FZD9O00144 591 aa21■□□□□ 0.95
TARDBP-203ENST00000439080 IL15P40933 162 aaPredicted RBP21■□□□□ 0.95
TARDBP-203ENST00000439080 IRS2Q9Y4H2 1338 aa21■□□□□ 0.95
TARDBP-203ENST00000439080 PDE8BO95263 885 aa20.99■□□□□ 0.95
TARDBP-203ENST00000439080 ECE2O60344 883 aa20.98■□□□□ 0.95
TARDBP-203ENST00000439080 DOK7Q18PE1 504 aa20.98■□□□□ 0.95
TARDBP-203ENST00000439080 TXNRD3Q86VQ6 643 aa20.98■□□□□ 0.95
TARDBP-203ENST00000439080 RPAP2Q8IXW5 612 aaPredicted RBP20.98■□□□□ 0.95
TARDBP-203ENST00000439080 ZNF526Q8TF50 670 aaPredicted RBP20.98■□□□□ 0.95
TARDBP-203ENST00000439080 ZNRF3Q9ULT6 936 aa20.98■□□□□ 0.95
TARDBP-203ENST00000439080 SCN4AP35499 1836 aa20.98■□□□□ 0.95
TARDBP-203ENST00000439080 EIF6P56537 245 aaKnown RBP20.97■□□□□ 0.95
TARDBP-203ENST00000439080 UBE4AQ14139 1066 aa20.97■□□□□ 0.95
TARDBP-203ENST00000439080 PUM3Q15397 648 aaKnown RBP20.97■□□□□ 0.95
TARDBP-203ENST00000439080 YDJCA8MPS7 323 aa20.97■□□□□ 0.95
TARDBP-203ENST00000439080 G3V3G9 751 aa20.97■□□□□ 0.95
TARDBP-203ENST00000439080 DCAF8Q5TAQ9 597 aa20.97■□□□□ 0.95
TARDBP-203ENST00000439080 SIRT2Q8IXJ6 389 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms