RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 PSMD1Q99460 953 aa10.95□□□□□ -0.66
HERPUD2-206ENST00000438224 MYH16Q9H6N6 1097 aa10.95□□□□□ -0.66
HERPUD2-206ENST00000438224 CWC25Q9NXE8 425 aaPredicted RBP10.95□□□□□ -0.66
HERPUD2-206ENST00000438224 ATP6V0A2Q9Y487 856 aa10.95□□□□□ -0.66
HERPUD2-206ENST00000438224 NEURL1BA8MQ27 555 aa10.94□□□□□ -0.66
HERPUD2-206ENST00000438224 F6X3S4 739 aa10.94□□□□□ -0.66
HERPUD2-206ENST00000438224 DDNO94850 711 aaPredicted RBP10.94□□□□□ -0.66
HERPUD2-206ENST00000438224 IARSP41252 1262 aaKnown RBP10.94□□□□□ -0.66
HERPUD2-206ENST00000438224 SLFN5Q08AF3 891 aa10.94□□□□□ -0.66
HERPUD2-206ENST00000438224 SEC31BQ9NQW1 1179 aa10.94□□□□□ -0.66
HERPUD2-206ENST00000438224 PSME4Q14997 1843 aa10.93□□□□□ -0.66
HERPUD2-206ENST00000438224 ADAMTSL1Q8N6G6 1762 aa10.93□□□□□ -0.66
HERPUD2-206ENST00000438224 CDHR2Q9BYE9 1310 aa10.93□□□□□ -0.66
HERPUD2-206ENST00000438224 CASP7P55210 303 aa10.93□□□□□ -0.66
HERPUD2-206ENST00000438224 FKBP5Q13451 457 aaPredicted RBP10.93□□□□□ -0.66
HERPUD2-206ENST00000438224 DIEXFQ68CQ4 756 aaKnown RBP10.93□□□□□ -0.66
HERPUD2-206ENST00000438224 CC2D2BQ6DHV5 1058 aa10.93□□□□□ -0.66
HERPUD2-206ENST00000438224 DDX46Q7L014 1031 aaKnown RBP10.93□□□□□ -0.66
HERPUD2-206ENST00000438224 DNAAF4Q8WXU2 420 aa10.93□□□□□ -0.66
HERPUD2-206ENST00000438224 CHMP4AQ9BY43 222 aa10.93□□□□□ -0.66
HERPUD2-206ENST00000438224 ZNF646O15015 1829 aaPredicted RBP10.93□□□□□ -0.66
HERPUD2-206ENST00000438224 FZD9O00144 591 aa10.92□□□□□ -0.66
HERPUD2-206ENST00000438224 TOMM70O94826 608 aa10.92□□□□□ -0.66
HERPUD2-206ENST00000438224 PRR29P0C7W0 189 aa10.92□□□□□ -0.66
HERPUD2-206ENST00000438224 PDAP1Q13442 181 aaKnown RBP10.92□□□□□ -0.66
HERPUD2-206ENST00000438224 SP8Q8IXZ3 490 aa10.92□□□□□ -0.66
HERPUD2-206ENST00000438224 TRMT2AQ8IZ69 625 aaKnown RBP10.92□□□□□ -0.66
HERPUD2-206ENST00000438224 CCDC85AQ96PX6 553 aaPredicted RBP10.92□□□□□ -0.66
HERPUD2-206ENST00000438224 RTFDC1Q9BY42 306 aaPredicted RBP10.92□□□□□ -0.66
HERPUD2-206ENST00000438224 MFRPQ9BY79 579 aa10.92□□□□□ -0.66
HERPUD2-206ENST00000438224 E9PSI1 815 aa10.91□□□□□ -0.66
HERPUD2-206ENST00000438224 H7C1W4 665 aa10.91□□□□□ -0.66
HERPUD2-206ENST00000438224 PDE8AO60658 829 aa10.91□□□□□ -0.66
HERPUD2-206ENST00000438224 BBOX1O75936 387 aa10.91□□□□□ -0.66
HERPUD2-206ENST00000438224 POTEIP0CG38 1075 aa10.91□□□□□ -0.66
HERPUD2-206ENST00000438224 POTEJP0CG39 1038 aa10.91□□□□□ -0.66
HERPUD2-206ENST00000438224 GCKRQ14397 625 aa10.91□□□□□ -0.66
HERPUD2-206ENST00000438224 AOC3Q16853 763 aa10.91□□□□□ -0.66
HERPUD2-206ENST00000438224 UBE3BQ7Z3V4 1068 aa10.91□□□□□ -0.66
HERPUD2-206ENST00000438224 VEGFAP15692 232 aaPredicted RBP10.9□□□□□ -0.66
HERPUD2-206ENST00000438224 CTSWP56202 376 aa10.9□□□□□ -0.66
HERPUD2-206ENST00000438224 NEXNQ0ZGT2 675 aa10.9□□□□□ -0.66
HERPUD2-206ENST00000438224 BEND3Q5T5X7 828 aa10.9□□□□□ -0.66
HERPUD2-206ENST00000438224 LARGE2Q8N3Y3 721 aa10.9□□□□□ -0.66
HERPUD2-206ENST00000438224 MPNDQ8N594 471 aa10.9□□□□□ -0.66
HERPUD2-206ENST00000438224 MRPL50Q8N5N7 158 aaKnown RBP10.9□□□□□ -0.66
HERPUD2-206ENST00000438224 LINS1Q8NG48 757 aa10.9□□□□□ -0.66
HERPUD2-206ENST00000438224 RBM46Q8TBY0 533 aaKnown RBP10.9□□□□□ -0.66
HERPUD2-206ENST00000438224 L3MBTL3Q96JM7 780 aaPredicted RBP10.9□□□□□ -0.66
HERPUD2-206ENST00000438224 POLR2AP24928 1970 aaKnown RBP10.89□□□□□ -0.67
HERPUD2-206ENST00000438224 PPIP5K2O43314 1243 aa10.89□□□□□ -0.67
HERPUD2-206ENST00000438224 HSPA6P17066 643 aa10.89□□□□□ -0.67
HERPUD2-206ENST00000438224 RPS8P62241 208 aaKnown RBP10.89□□□□□ -0.67
HERPUD2-206ENST00000438224 GPSM2P81274 684 aa10.89□□□□□ -0.67
HERPUD2-206ENST00000438224 DPY19L2Q6NUT2 758 aa10.89□□□□□ -0.67
HERPUD2-206ENST00000438224 DPP8Q6V1X1 898 aaPredicted RBP10.89□□□□□ -0.67
HERPUD2-206ENST00000438224 TTLL11Q8NHH1 800 aa10.89□□□□□ -0.67
HERPUD2-206ENST00000438224 SSH1Q8WYL5 1049 aa10.89□□□□□ -0.67
HERPUD2-206ENST00000438224 GPR101Q96P66 508 aaPredicted RBP10.89□□□□□ -0.67
HERPUD2-206ENST00000438224 BCL2L13Q9BXK5 485 aa10.89□□□□□ -0.67
HERPUD2-206ENST00000438224 GREM2Q9H772 168 aa10.89□□□□□ -0.67
HERPUD2-206ENST00000438224 WTIPA6NIX2 430 aaPredicted RBP10.88□□□□□ -0.67
HERPUD2-206ENST00000438224 KIAA2012Q0VF49 1180 aa10.88□□□□□ -0.67
HERPUD2-206ENST00000438224 CCDC152Q4G0S7 254 aa10.88□□□□□ -0.67
HERPUD2-206ENST00000438224 GRIPAP1Q4V328 841 aa10.88□□□□□ -0.67
HERPUD2-206ENST00000438224 TMC4Q7Z404 712 aa10.88□□□□□ -0.67
HERPUD2-206ENST00000438224 PLA2G12BQ9BX93 195 aa10.88□□□□□ -0.67
HERPUD2-206ENST00000438224 POLLQ9UGP5 575 aa10.88□□□□□ -0.67
HERPUD2-206ENST00000438224 RTL9Q8NET4 1388 aa10.88□□□□□ -0.67
HERPUD2-206ENST00000438224 YDJCA8MPS7 323 aa10.87□□□□□ -0.67
HERPUD2-206ENST00000438224 FAM161AQ3B820 660 aa10.87□□□□□ -0.67
HERPUD2-206ENST00000438224 EPHA10Q5JZY3 1008 aa10.87□□□□□ -0.67
HERPUD2-206ENST00000438224 JDP2Q8WYK2 163 aa10.87□□□□□ -0.67
HERPUD2-206ENST00000438224 CSF1RP07333 972 aa10.86□□□□□ -0.67
HERPUD2-206ENST00000438224 SCNN1DP51172 638 aa10.86□□□□□ -0.67
HERPUD2-206ENST00000438224 HTRA3P83110 453 aa10.86□□□□□ -0.67
HERPUD2-206ENST00000438224 FOXO4P98177 505 aa10.86□□□□□ -0.67
HERPUD2-206ENST00000438224 CXCL9Q07325 125 aa10.86□□□□□ -0.67
HERPUD2-206ENST00000438224 NIM1KQ8IY84 436 aa10.86□□□□□ -0.67
HERPUD2-206ENST00000438224 C16orf71Q8IYS4 520 aaPredicted RBP10.86□□□□□ -0.67
HERPUD2-206ENST00000438224 GPC2Q8N158 579 aa10.86□□□□□ -0.67
HERPUD2-206ENST00000438224 SUPT20HQ8NEM7 779 aa10.86□□□□□ -0.67
HERPUD2-206ENST00000438224 TAF1DQ9H5J8 278 aaPredicted RBP10.86□□□□□ -0.67
HERPUD2-206ENST00000438224 NSFL1CQ9UNZ2 370 aaKnown RBP10.86□□□□□ -0.67
HERPUD2-206ENST00000438224 GJA3Q9Y6H8 435 aa10.86□□□□□ -0.67
HERPUD2-206ENST00000438224 TRPM7Q96QT4 1865 aa10.85□□□□□ -0.67
HERPUD2-206ENST00000438224 C19orf67A6NJJ6 358 aa10.85□□□□□ -0.67
HERPUD2-206ENST00000438224 HSP90B1P14625 803 aaKnown RBP10.85□□□□□ -0.67
HERPUD2-206ENST00000438224 FSTL1Q12841 308 aa10.85□□□□□ -0.67
HERPUD2-206ENST00000438224 SLC4A10Q6U841 1118 aa10.85□□□□□ -0.67
HERPUD2-206ENST00000438224 TBC1D16Q8TBP0 767 aa10.85□□□□□ -0.67
HERPUD2-206ENST00000438224 KAZALD1Q96I82 304 aa10.85□□□□□ -0.67
HERPUD2-206ENST00000438224 VPS33BQ9H267 617 aa10.85□□□□□ -0.67
HERPUD2-206ENST00000438224 ZNRF3Q9ULT6 936 aa10.85□□□□□ -0.67
HERPUD2-206ENST00000438224 SHTN1A0MZ66 631 aa10.84□□□□□ -0.67
HERPUD2-206ENST00000438224 C6orf229H3BNL8 230 aa10.84□□□□□ -0.67
HERPUD2-206ENST00000438224 GRM8O00222 908 aa10.84□□□□□ -0.67
HERPUD2-206ENST00000438224 RIMBP2O15034 1052 aa10.84□□□□□ -0.67
HERPUD2-206ENST00000438224 ALDH1L1O75891 902 aa10.84□□□□□ -0.67
HERPUD2-206ENST00000438224 RAD17O75943 681 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 269.5 ms