RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 CARD10Q9BWT7 1032 aa19.07■□□□□ 0.64
HLA-DQB2-231ENST00000435145 SCAND2PQ9GZW5 306 aaPredicted RBP19.07■□□□□ 0.64
HLA-DQB2-231ENST00000435145 USP25Q9UHP3 1055 aa19.07■□□□□ 0.64
HLA-DQB2-231ENST00000435145 Q6ZUG5 572 aa19.06■□□□□ 0.64
HLA-DQB2-231ENST00000435145 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.06■□□□□ 0.64
HLA-DQB2-231ENST00000435145 HMGB1P09429 215 aaKnown RBP19.05■□□□□ 0.64
HLA-DQB2-231ENST00000435145 ISCA1Q9BUE6 129 aa19.05■□□□□ 0.64
HLA-DQB2-231ENST00000435145 CHMP3Q9Y3E7 222 aa19.05■□□□□ 0.64
HLA-DQB2-231ENST00000435145 KDM4AO75164 1064 aa19.05■□□□□ 0.64
HLA-DQB2-231ENST00000435145 IL2RBP14784 551 aa19.05■□□□□ 0.64
HLA-DQB2-231ENST00000435145 STK3Q13188 491 aa19.05■□□□□ 0.64
HLA-DQB2-231ENST00000435145 FAM173BQ6P4H8 233 aa19.05■□□□□ 0.64
HLA-DQB2-231ENST00000435145 SMARCC2Q8TAQ2 1214 aa19.05■□□□□ 0.64
HLA-DQB2-231ENST00000435145 AGXT2Q9BYV1 514 aa19.05■□□□□ 0.64
HLA-DQB2-231ENST00000435145 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.05■□□□□ 0.64
HLA-DQB2-231ENST00000435145 ABCA3Q99758 1704 aa19.04■□□□□ 0.64
HLA-DQB2-231ENST00000435145 KDM4FA0A1W2PPD8 638 aa19.04■□□□□ 0.64
HLA-DQB2-231ENST00000435145 GOLIM4O00461 696 aa19.04■□□□□ 0.64
HLA-DQB2-231ENST00000435145 JAK2O60674 1132 aa19.04■□□□□ 0.64
HLA-DQB2-231ENST00000435145 TIMM10P62072 90 aa19.04■□□□□ 0.64
HLA-DQB2-231ENST00000435145 RESTQ13127 1097 aa19.04■□□□□ 0.64
HLA-DQB2-231ENST00000435145 LRRC24Q50LG9 513 aa19.04■□□□□ 0.64
HLA-DQB2-231ENST00000435145 LLPHQ9BRT6 129 aaKnown RBP19.04■□□□□ 0.64
HLA-DQB2-231ENST00000435145 PFKFB2O60825 505 aa19.03■□□□□ 0.64
HLA-DQB2-231ENST00000435145 ADCY5O95622 1261 aa19.03■□□□□ 0.64
HLA-DQB2-231ENST00000435145 DHX32Q7L7V1 743 aaKnown RBP19.03■□□□□ 0.64
HLA-DQB2-231ENST00000435145 LEO1Q8WVC0 666 aaPredicted RBP19.03■□□□□ 0.64
HLA-DQB2-231ENST00000435145 NEUROD6Q96NK8 337 aa19.03■□□□□ 0.64
HLA-DQB2-231ENST00000435145 ZBTB3Q9H5J0 574 aa19.03■□□□□ 0.64
HLA-DQB2-231ENST00000435145 PTMAP06454 111 aaKnown RBP19.03■□□□□ 0.64
HLA-DQB2-231ENST00000435145 LIG1P18858 919 aa19.03■□□□□ 0.64
HLA-DQB2-231ENST00000435145 EXOSC10Q01780 885 aaKnown RBP19.03■□□□□ 0.64
HLA-DQB2-231ENST00000435145 TRIM28Q13263 835 aaKnown RBP19.03■□□□□ 0.64
HLA-DQB2-231ENST00000435145 FBXO3Q9UK99 471 aa19.03■□□□□ 0.64
HLA-DQB2-231ENST00000435145 LAMA4Q16363 1823 aa19.02■□□□□ 0.64
HLA-DQB2-231ENST00000435145 CCDC192P0DO97 292 aa19.02■□□□□ 0.64
HLA-DQB2-231ENST00000435145 TPRNQ4KMQ1 711 aa19.02■□□□□ 0.64
HLA-DQB2-231ENST00000435145 RBM43Q6ZSC3 357 aaKnown RBP19.02■□□□□ 0.64
HLA-DQB2-231ENST00000435145 BRF1Q92994 677 aa19.02■□□□□ 0.64
HLA-DQB2-231ENST00000435145 TOGARAM1Q9Y4F4 1720 aa19.02■□□□□ 0.64
HLA-DQB2-231ENST00000435145 A0A1B0GUL7 405 aa19.01■□□□□ 0.63
HLA-DQB2-231ENST00000435145 SCRN1Q12765 414 aa19.01■□□□□ 0.63
HLA-DQB2-231ENST00000435145 SPATA32Q96LK8 384 aa19.01■□□□□ 0.63
HLA-DQB2-231ENST00000435145 MAST3O60307 1309 aa19.01■□□□□ 0.63
HLA-DQB2-231ENST00000435145 RNF113AO15541 343 aaKnown RBP19.01■□□□□ 0.63
HLA-DQB2-231ENST00000435145 ZNF594Q96JF6 807 aaPredicted RBP19.01■□□□□ 0.63
HLA-DQB2-231ENST00000435145 NUP62CLQ9H1M0 184 aa19.01■□□□□ 0.63
HLA-DQB2-231ENST00000435145 TCIRG1Q13488 830 aa19■□□□□ 0.63
HLA-DQB2-231ENST00000435145 MAP3K11Q16584 847 aa19■□□□□ 0.63
HLA-DQB2-231ENST00000435145 SLFNL1Q499Z3 407 aa19■□□□□ 0.63
HLA-DQB2-231ENST00000435145 PLA2G12BQ9BX93 195 aa19■□□□□ 0.63
HLA-DQB2-231ENST00000435145 ZSCAN16Q9H4T2 348 aaPredicted RBP19■□□□□ 0.63
HLA-DQB2-231ENST00000435145 IFIT1P09914 478 aaKnown RBP19■□□□□ 0.63
HLA-DQB2-231ENST00000435145 HSPD1P10809 573 aaKnown RBP19■□□□□ 0.63
HLA-DQB2-231ENST00000435145 PUS3Q9BZE2 481 aaKnown RBP19■□□□□ 0.63
HLA-DQB2-231ENST00000435145 DDX19AQ9NUU7 478 aaKnown RBP19■□□□□ 0.63
HLA-DQB2-231ENST00000435145 AP5Z1O43299 807 aa18.99■□□□□ 0.63
HLA-DQB2-231ENST00000435145 HSP90B1P14625 803 aaKnown RBP18.99■□□□□ 0.63
HLA-DQB2-231ENST00000435145 KIAA2012Q0VF49 1180 aa18.99■□□□□ 0.63
HLA-DQB2-231ENST00000435145 NAA16Q6N069 864 aaPredicted RBP18.99■□□□□ 0.63
HLA-DQB2-231ENST00000435145 FBXL16Q8N461 479 aa18.99■□□□□ 0.63
HLA-DQB2-231ENST00000435145 NSUN7Q8NE18 718 aaKnown RBP18.99■□□□□ 0.63
HLA-DQB2-231ENST00000435145 TFIP11Q9UBB9 837 aaKnown RBP18.99■□□□□ 0.63
HLA-DQB2-231ENST00000435145 CCDC9Q9Y3X0 531 aaKnown RBP18.99■□□□□ 0.63
HLA-DQB2-231ENST00000435145 CTDNEP1O95476 244 aa18.98■□□□□ 0.63
HLA-DQB2-231ENST00000435145 PGBD1Q96JS3 809 aa18.98■□□□□ 0.63
HLA-DQB2-231ENST00000435145 E7EWF7 191 aa18.98■□□□□ 0.63
HLA-DQB2-231ENST00000435145 FAM200AQ8TCP9 573 aa18.98■□□□□ 0.63
HLA-DQB2-231ENST00000435145 LRRC2Q9BYS8 371 aa18.98■□□□□ 0.63
HLA-DQB2-231ENST00000435145 CLSTN2Q9H4D0 955 aa18.98■□□□□ 0.63
HLA-DQB2-231ENST00000435145 DACT1Q9NYF0 836 aa18.98■□□□□ 0.63
HLA-DQB2-231ENST00000435145 CEP126Q9P2H0 1117 aa18.98■□□□□ 0.63
HLA-DQB2-231ENST00000435145 MRVI1Q9Y6F6 885 aa18.98■□□□□ 0.63
HLA-DQB2-231ENST00000435145 SALL1Q9NSC2 1324 aa18.98■□□□□ 0.63
HLA-DQB2-231ENST00000435145 PCCAP05165 728 aaPredicted RBP18.97■□□□□ 0.63
HLA-DQB2-231ENST00000435145 HMGN5P82970 282 aaKnown RBP18.97■□□□□ 0.63
HLA-DQB2-231ENST00000435145 TYRO3Q06418 890 aa18.97■□□□□ 0.63
HLA-DQB2-231ENST00000435145 R3HCC1Q9Y3T6 440 aaKnown RBP18.97■□□□□ 0.63
HLA-DQB2-231ENST00000435145 M0R2C6 588 aa18.96■□□□□ 0.63
HLA-DQB2-231ENST00000435145 RRP9O43818 475 aaKnown RBP18.96■□□□□ 0.63
HLA-DQB2-231ENST00000435145 CSF1RP07333 972 aa18.96■□□□□ 0.63
HLA-DQB2-231ENST00000435145 ADD1P35611 737 aaKnown RBP18.96■□□□□ 0.63
HLA-DQB2-231ENST00000435145 VSIG10Q8N0Z9 540 aa18.96■□□□□ 0.63
HLA-DQB2-231ENST00000435145 ABCC12Q96J65 1359 aa18.96■□□□□ 0.63
HLA-DQB2-231ENST00000435145 A0A0G2JLW4 131 aa18.96■□□□□ 0.63
HLA-DQB2-231ENST00000435145 HSPA2P54652 639 aa18.96■□□□□ 0.63
HLA-DQB2-231ENST00000435145 EVCP57679 992 aa18.96■□□□□ 0.63
HLA-DQB2-231ENST00000435145 PIBF1Q8WXW3 757 aa18.96■□□□□ 0.63
HLA-DQB2-231ENST00000435145 SLAIN2Q9P270 581 aa18.96■□□□□ 0.63
HLA-DQB2-231ENST00000435145 AKAP2Q9Y2D5 859 aa18.96■□□□□ 0.63
HLA-DQB2-231ENST00000435145 H3BQV1 296 aa18.95■□□□□ 0.62
HLA-DQB2-231ENST00000435145 CCDC57Q2TAC2 916 aa18.95■□□□□ 0.62
HLA-DQB2-231ENST00000435145 IFFO2Q5TF58 517 aa18.95■□□□□ 0.62
HLA-DQB2-231ENST00000435145 OSBP2Q969R2 916 aa18.95■□□□□ 0.62
HLA-DQB2-231ENST00000435145 DDX11Q96FC9 970 aa18.95■□□□□ 0.62
HLA-DQB2-231ENST00000435145 ZNF274Q96GC6 653 aaPredicted RBP18.95■□□□□ 0.62
HLA-DQB2-231ENST00000435145 TEX13AQ9BXU3 409 aaPredicted RBP18.95■□□□□ 0.62
HLA-DQB2-231ENST00000435145 TNMDQ9H2S6 317 aa18.95■□□□□ 0.62
HLA-DQB2-231ENST00000435145 CFAP45Q9UL16 551 aa18.95■□□□□ 0.62
HLA-DQB2-231ENST00000435145 GOLGA6L4A6NEF3 574 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms