RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 ARAP2Q8WZ64 1704 aa13.64□□□□□ -0.23
CHD4-202ENST00000430771 MROH5Q6ZUA9 1318 aa13.64□□□□□ -0.23
CHD4-202ENST00000430771 SURF6O75683 361 aaKnown RBP13.63□□□□□ -0.23
CHD4-202ENST00000430771 IL15P40933 162 aaPredicted RBP13.63□□□□□ -0.23
CHD4-202ENST00000430771 GRIPAP1Q4V328 841 aa13.63□□□□□ -0.23
CHD4-202ENST00000430771 SIRT2Q8IXJ6 389 aa13.63□□□□□ -0.23
CHD4-202ENST00000430771 NOP58Q9Y2X3 529 aaKnown RBP13.63□□□□□ -0.23
CHD4-202ENST00000430771 ATP6V0A2Q9Y487 856 aa13.63□□□□□ -0.23
CHD4-202ENST00000430771 CCDC93Q567U6 631 aa13.62□□□□□ -0.23
CHD4-202ENST00000430771 METTL24Q5JXM2 366 aa13.62□□□□□ -0.23
CHD4-202ENST00000430771 SP8Q8IXZ3 490 aa13.62□□□□□ -0.23
CHD4-202ENST00000430771 ANKRD2Q9GZV1 360 aa13.62□□□□□ -0.23
CHD4-202ENST00000430771 BCS1LQ9Y276 419 aa13.62□□□□□ -0.23
CHD4-202ENST00000430771 XDHP47989 1333 aa13.62□□□□□ -0.23
CHD4-202ENST00000430771 FER1L6Q2WGJ9 1857 aa13.61□□□□□ -0.23
CHD4-202ENST00000430771 RAB11FIP3O75154 756 aa13.61□□□□□ -0.23
CHD4-202ENST00000430771 CHRNDQ07001 517 aa13.61□□□□□ -0.23
CHD4-202ENST00000430771 GCC1Q96CN9 775 aa13.61□□□□□ -0.23
CHD4-202ENST00000430771 EXOC6BQ9Y2D4 811 aa13.61□□□□□ -0.23
CHD4-202ENST00000430771 ZNF609O15014 1411 aa13.61□□□□□ -0.23
CHD4-202ENST00000430771 DUOX1Q9NRD9 1551 aa13.61□□□□□ -0.23
CHD4-202ENST00000430771 LRRC24Q50LG9 513 aa13.6□□□□□ -0.23
CHD4-202ENST00000430771 SNED1Q8TER0 1413 aa13.6□□□□□ -0.23
CHD4-202ENST00000430771 CCDC136Q96JN2 1154 aa13.6□□□□□ -0.23
CHD4-202ENST00000430771 PUS3Q9BZE2 481 aaKnown RBP13.6□□□□□ -0.23
CHD4-202ENST00000430771 DCTPP1Q9H773 170 aa13.6□□□□□ -0.23
CHD4-202ENST00000430771 PPP4R2Q9NY27 417 aa13.6□□□□□ -0.23
CHD4-202ENST00000430771 ANKIB1Q9P2G1 1089 aa13.6□□□□□ -0.23
CHD4-202ENST00000430771 WWC3Q9ULE0 1092 aa13.6□□□□□ -0.23
CHD4-202ENST00000430771 MINPP1Q9UNW1 487 aa13.6□□□□□ -0.23
CHD4-202ENST00000430771 RIPOR2Q9Y4F9 1068 aa13.6□□□□□ -0.23
CHD4-202ENST00000430771 C21orf2O43822 256 aa13.59□□□□□ -0.23
CHD4-202ENST00000430771 KCNJ4P48050 445 aa13.59□□□□□ -0.23
CHD4-202ENST00000430771 DPP8Q6V1X1 898 aaPredicted RBP13.59□□□□□ -0.23
CHD4-202ENST00000430771 ATG9AQ7Z3C6 839 aa13.59□□□□□ -0.23
CHD4-202ENST00000430771 RTKN2Q8IZC4 609 aa13.59□□□□□ -0.23
CHD4-202ENST00000430771 KIF1BPQ96EK5 621 aa13.59□□□□□ -0.23
CHD4-202ENST00000430771 CEP126Q9P2H0 1117 aa13.59□□□□□ -0.23
CHD4-202ENST00000430771 ZNF219Q9P2Y4 722 aaPredicted RBP13.59□□□□□ -0.23
CHD4-202ENST00000430771 ZBTB47Q9UFB7 747 aaPredicted RBP13.59□□□□□ -0.23
CHD4-202ENST00000430771 PUM3Q15397 648 aaKnown RBP13.58□□□□□ -0.24
CHD4-202ENST00000430771 PELP1Q8IZL8 1130 aaKnown RBP13.58□□□□□ -0.24
CHD4-202ENST00000430771 MPNDQ8N594 471 aa13.58□□□□□ -0.24
CHD4-202ENST00000430771 SUPT20HQ8NEM7 779 aa13.58□□□□□ -0.24
CHD4-202ENST00000430771 C7orf43Q8WVR3 580 aa13.58□□□□□ -0.24
CHD4-202ENST00000430771 LRRCC1Q9C099 1032 aa13.58□□□□□ -0.24
CHD4-202ENST00000430771 PODXL2Q9NZ53 605 aa13.58□□□□□ -0.24
CHD4-202ENST00000430771 GGA1Q9UJY5 639 aa13.58□□□□□ -0.24
CHD4-202ENST00000430771 NSFL1CQ9UNZ2 370 aaKnown RBP13.58□□□□□ -0.24
CHD4-202ENST00000430771 AKAP2Q9Y2D5 859 aa13.58□□□□□ -0.24
CHD4-202ENST00000430771 UFL1O94874 794 aa13.57□□□□□ -0.24
CHD4-202ENST00000430771 PDE8BO95263 885 aa13.57□□□□□ -0.24
CHD4-202ENST00000430771 ATP2B4P23634 1241 aa13.57□□□□□ -0.24
CHD4-202ENST00000430771 GPSM2P81274 684 aa13.57□□□□□ -0.24
CHD4-202ENST00000430771 CENPQQ7L2Z9 268 aaPredicted RBP13.57□□□□□ -0.24
CHD4-202ENST00000430771 SMC5Q8IY18 1101 aa13.57□□□□□ -0.24
CHD4-202ENST00000430771 VGLL2Q8N8G2 317 aa13.57□□□□□ -0.24
CHD4-202ENST00000430771 RHPN1Q8TCX5 695 aa13.57□□□□□ -0.24
CHD4-202ENST00000430771 EYA3Q99504 573 aa13.57□□□□□ -0.24
CHD4-202ENST00000430771 TAOK3Q9H2K8 898 aa13.57□□□□□ -0.24
CHD4-202ENST00000430771 LEMD3Q9Y2U8 911 aa13.57□□□□□ -0.24
CHD4-202ENST00000430771 MED23Q9ULK4 1368 aa13.57□□□□□ -0.24
CHD4-202ENST00000430771 APBB1O00213 710 aa13.56□□□□□ -0.24
CHD4-202ENST00000430771 IFIT1P09914 478 aaKnown RBP13.56□□□□□ -0.24
CHD4-202ENST00000430771 SLC5A1P13866 664 aa13.56□□□□□ -0.24
CHD4-202ENST00000430771 TFCP2Q12800 502 aa13.56□□□□□ -0.24
CHD4-202ENST00000430771 UBE4AQ14139 1066 aa13.56□□□□□ -0.24
CHD4-202ENST00000430771 ATP2B3Q16720 1220 aa13.56□□□□□ -0.24
CHD4-202ENST00000430771 PSMD1Q99460 953 aa13.56□□□□□ -0.24
CHD4-202ENST00000430771 GPR108Q9NPR9 543 aa13.56□□□□□ -0.24
CHD4-202ENST00000430771 ZNF804BA4D1E1 1349 aa13.56□□□□□ -0.24
CHD4-202ENST00000430771 LTBP3Q9NS15 1303 aa13.56□□□□□ -0.24
CHD4-202ENST00000430771 MYH13Q9UKX3 1938 aa13.56□□□□□ -0.24
CHD4-202ENST00000430771 TAF5LO75529 589 aa13.55□□□□□ -0.24
CHD4-202ENST00000430771 SASH1O94885 1247 aa13.55□□□□□ -0.24
CHD4-202ENST00000430771 IGHDP01880 384 aa13.55□□□□□ -0.24
CHD4-202ENST00000430771 FKBP4Q02790 459 aaKnown RBP eCLIP13.55□□□□□ -0.24
CHD4-202ENST00000430771 GPR162Q16538 588 aa13.55□□□□□ -0.24
CHD4-202ENST00000430771 TNNI3KQ59H18 835 aa13.55□□□□□ -0.24
CHD4-202ENST00000430771 OLFM4Q6UX06 510 aa13.55□□□□□ -0.24
CHD4-202ENST00000430771 CLASRPQ8N2M8 674 aaKnown RBP13.55□□□□□ -0.24
CHD4-202ENST00000430771 HELBQ8NG08 1087 aaPredicted RBP13.55□□□□□ -0.24
CHD4-202ENST00000430771 LPIN2Q92539 896 aa13.55□□□□□ -0.24
CHD4-202ENST00000430771 RTFDC1Q9BY42 306 aaPredicted RBP13.55□□□□□ -0.24
CHD4-202ENST00000430771 FPGT-TNNI3KV9GXZ4 949 aa13.55□□□□□ -0.24
CHD4-202ENST00000430771 KDM2BQ8NHM5 1336 aa13.55□□□□□ -0.24
CHD4-202ENST00000430771 TIAM2Q8IVF5 1701 aa13.54□□□□□ -0.24
CHD4-202ENST00000430771 DCAF8L1A6NGE4 600 aa13.54□□□□□ -0.24
CHD4-202ENST00000430771 C6orf229H3BNL8 230 aa13.54□□□□□ -0.24
CHD4-202ENST00000430771 GRIN3BO60391 1043 aa13.54□□□□□ -0.24
CHD4-202ENST00000430771 YBX3P16989 372 aaKnown RBP eCLIP13.54□□□□□ -0.24
CHD4-202ENST00000430771 SLC51AQ86UW1 340 aa13.54□□□□□ -0.24
CHD4-202ENST00000430771 TBC1D16Q8TBP0 767 aa13.54□□□□□ -0.24
CHD4-202ENST00000430771 DICER1Q9UPY3 1922 aaKnown RBP13.53□□□□□ -0.24
CHD4-202ENST00000430771 A0A1B0GUL7 405 aa13.53□□□□□ -0.24
CHD4-202ENST00000430771 FGFR2P21802 821 aa13.53□□□□□ -0.24
CHD4-202ENST00000430771 B4GALNT3Q6L9W6 998 aa13.53□□□□□ -0.24
CHD4-202ENST00000430771 AACSQ86V21 672 aa13.53□□□□□ -0.24
CHD4-202ENST00000430771 VPS33BQ9H267 617 aa13.53□□□□□ -0.24
CHD4-202ENST00000430771 IL1RAPL2Q9NP60 686 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms