RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 FTSJ3Q8IY81 847 aaKnown RBP11.75□□□□□ -0.53
NEDD1-203ENST00000429527 RASSF7Q02833 373 aa11.75□□□□□ -0.53
NEDD1-203ENST00000429527 GOLGA6L3A6NEY3 463 aa11.75□□□□□ -0.53
NEDD1-203ENST00000429527 IGKV5-2P06315 115 aa11.75□□□□□ -0.53
NEDD1-203ENST00000429527 PPP1R9BQ96SB3 815 aa11.75□□□□□ -0.53
NEDD1-203ENST00000429527 PHAXQ9H814 394 aaKnown RBP11.75□□□□□ -0.53
NEDD1-203ENST00000429527 PRKCSHP14314 528 aaPredicted RBP11.74□□□□□ -0.53
NEDD1-203ENST00000429527 CWC25Q9NXE8 425 aaPredicted RBP11.74□□□□□ -0.53
NEDD1-203ENST00000429527 ZNF330Q9Y3S2 320 aaPredicted RBP11.74□□□□□ -0.53
NEDD1-203ENST00000429527 PTPRCP08575 1304 aa11.74□□□□□ -0.53
NEDD1-203ENST00000429527 TRAK2O60296 914 aa11.74□□□□□ -0.53
NEDD1-203ENST00000429527 INTS3Q68E01 1043 aaKnown RBP11.74□□□□□ -0.53
NEDD1-203ENST00000429527 RPGRQ92834 1020 aaKnown RBP11.74□□□□□ -0.53
NEDD1-203ENST00000429527 TSR2Q969E8 191 aaKnown RBP11.74□□□□□ -0.53
NEDD1-203ENST00000429527 ZNF622Q969S3 477 aaKnown RBP eCLIP11.74□□□□□ -0.53
NEDD1-203ENST00000429527 RNF181Q9P0P0 153 aa11.74□□□□□ -0.53
NEDD1-203ENST00000429527 POTECB2RU33 542 aa11.73□□□□□ -0.53
NEDD1-203ENST00000429527 C21orf2O43822 256 aa11.73□□□□□ -0.53
NEDD1-203ENST00000429527 ANXA1P04083 346 aa11.73□□□□□ -0.53
NEDD1-203ENST00000429527 STK31Q9BXU1 1019 aa11.73□□□□□ -0.53
NEDD1-203ENST00000429527 NEURL1BA8MQ27 555 aa11.73□□□□□ -0.53
NEDD1-203ENST00000429527 PDE8AO60658 829 aa11.73□□□□□ -0.53
NEDD1-203ENST00000429527 CSF1RP07333 972 aa11.73□□□□□ -0.53
NEDD1-203ENST00000429527 IARSP41252 1262 aaKnown RBP11.73□□□□□ -0.53
NEDD1-203ENST00000429527 NUTM1Q86Y26 1132 aa11.73□□□□□ -0.53
NEDD1-203ENST00000429527 ECM29Q5VYK3 1845 aa11.73□□□□□ -0.53
NEDD1-203ENST00000429527 EPB41L2O43491 1005 aaKnown RBP11.73□□□□□ -0.53
NEDD1-203ENST00000429527 ALDH1L1O75891 902 aa11.73□□□□□ -0.53
NEDD1-203ENST00000429527 TERF1P54274 439 aa11.73□□□□□ -0.53
NEDD1-203ENST00000429527 SIRT2Q8IXJ6 389 aa11.73□□□□□ -0.53
NEDD1-203ENST00000429527 LINS1Q8NG48 757 aa11.73□□□□□ -0.53
NEDD1-203ENST00000429527 TOMM70O94826 608 aa11.72□□□□□ -0.53
NEDD1-203ENST00000429527 GPTP24298 496 aa11.72□□□□□ -0.53
NEDD1-203ENST00000429527 FLIIQ13045 1269 aa11.72□□□□□ -0.53
NEDD1-203ENST00000429527 HSCBQ8IWL3 235 aa11.72□□□□□ -0.53
NEDD1-203ENST00000429527 GPBP1L1Q9HC44 474 aaPredicted RBP11.72□□□□□ -0.53
NEDD1-203ENST00000429527 TRMT112Q9UI30 125 aaKnown RBP11.72□□□□□ -0.53
NEDD1-203ENST00000429527 TRPM7Q96QT4 1865 aa11.72□□□□□ -0.53
NEDD1-203ENST00000429527 HS1BP3Q53T59 392 aa11.72□□□□□ -0.53
NEDD1-203ENST00000429527 SYNE4Q8N205 404 aa11.71□□□□□ -0.53
NEDD1-203ENST00000429527 MAP3K2Q9Y2U5 619 aa11.71□□□□□ -0.53
NEDD1-203ENST00000429527 MMP14P50281 582 aa11.71□□□□□ -0.53
NEDD1-203ENST00000429527 C15orf52Q6ZUT6 534 aaKnown RBP11.71□□□□□ -0.53
NEDD1-203ENST00000429527 RIC3Q7Z5B4 369 aa11.71□□□□□ -0.53
NEDD1-203ENST00000429527 BEND3Q5T5X7 828 aa11.71□□□□□ -0.54
NEDD1-203ENST00000429527 OSBPL3Q9H4L5 887 aa11.71□□□□□ -0.54
NEDD1-203ENST00000429527 DCTPP1Q9H773 170 aa11.71□□□□□ -0.54
NEDD1-203ENST00000429527 ZNF445P59923 1031 aa11.7□□□□□ -0.54
NEDD1-203ENST00000429527 IRS4O14654 1257 aaPredicted RBP11.7□□□□□ -0.54
NEDD1-203ENST00000429527 KIAA2012Q0VF49 1180 aa11.7□□□□□ -0.54
NEDD1-203ENST00000429527 GCKRQ14397 625 aa11.7□□□□□ -0.54
NEDD1-203ENST00000429527 DNAAF4Q8WXU2 420 aa11.7□□□□□ -0.54
NEDD1-203ENST00000429527 IRS2Q9Y4H2 1338 aa11.7□□□□□ -0.54
NEDD1-203ENST00000429527 DDX46Q7L014 1031 aaKnown RBP11.7□□□□□ -0.54
NEDD1-203ENST00000429527 GPC2Q8N158 579 aa11.7□□□□□ -0.54
NEDD1-203ENST00000429527 NECTIN2Q92692 538 aa11.7□□□□□ -0.54
NEDD1-203ENST00000429527 MYD88Q99836 296 aa11.7□□□□□ -0.54
NEDD1-203ENST00000429527 GRPEL1Q9HAV7 217 aa11.7□□□□□ -0.54
NEDD1-203ENST00000429527 K7ELQ4 463 aaPredicted RBP11.69□□□□□ -0.54
NEDD1-203ENST00000429527 AIMP1Q12904 312 aaKnown RBP11.69□□□□□ -0.54
NEDD1-203ENST00000429527 G2E3Q7L622 706 aa11.69□□□□□ -0.54
NEDD1-203ENST00000429527 TNPO1Q92973 898 aaKnown RBP11.69□□□□□ -0.54
NEDD1-203ENST00000429527 CTSWP56202 376 aa11.69□□□□□ -0.54
NEDD1-203ENST00000429527 CCDC152Q4G0S7 254 aa11.69□□□□□ -0.54
NEDD1-203ENST00000429527 ITPRIPQ8IWB1 547 aa11.69□□□□□ -0.54
NEDD1-203ENST00000429527 API5Q9BZZ5 524 aaKnown RBP11.69□□□□□ -0.54
NEDD1-203ENST00000429527 PI4KAP2A4QPH2 592 aa11.68□□□□□ -0.54
NEDD1-203ENST00000429527 SLC4A2P04920 1241 aa11.68□□□□□ -0.54
NEDD1-203ENST00000429527 GTF2E1P29083 439 aaPredicted RBP11.68□□□□□ -0.54
NEDD1-203ENST00000429527 PI4KAP1Q8N8J0 262 aa11.68□□□□□ -0.54
NEDD1-203ENST00000429527 GBP4Q96PP9 640 aa11.68□□□□□ -0.54
NEDD1-203ENST00000429527 SLKQ9H2G2 1235 aaPredicted RBP11.68□□□□□ -0.54
NEDD1-203ENST00000429527 PGAP2Q9UHJ9 254 aa11.68□□□□□ -0.54
NEDD1-203ENST00000429527 NEXNQ0ZGT2 675 aa11.68□□□□□ -0.54
NEDD1-203ENST00000429527 KLHL40Q2TBA0 621 aa11.68□□□□□ -0.54
NEDD1-203ENST00000429527 CCDC24Q8N4L8 307 aa11.68□□□□□ -0.54
NEDD1-203ENST00000429527 SALL3Q9BXA9 1300 aa11.68□□□□□ -0.54
NEDD1-203ENST00000429527 MED23Q9ULK4 1368 aa11.68□□□□□ -0.54
NEDD1-203ENST00000429527 TBC1D9Q6ZT07 1266 aa11.68□□□□□ -0.54
NEDD1-203ENST00000429527 BCL2L13Q9BXK5 485 aa11.68□□□□□ -0.54
NEDD1-203ENST00000429527 VEGFAP15692 232 aaPredicted RBP11.67□□□□□ -0.54
NEDD1-203ENST00000429527 SCN9AQ15858 1988 aa11.67□□□□□ -0.54
NEDD1-203ENST00000429527 CDC45O75419 566 aa11.67□□□□□ -0.54
NEDD1-203ENST00000429527 HSPA6P17066 643 aa11.67□□□□□ -0.54
NEDD1-203ENST00000429527 TTLL11Q8NHH1 800 aa11.67□□□□□ -0.54
NEDD1-203ENST00000429527 IQCA1LA6NCM1 817 aa11.67□□□□□ -0.54
NEDD1-203ENST00000429527 RABEP1Q15276 862 aa11.67□□□□□ -0.54
NEDD1-203ENST00000429527 RABL6Q3YEC7 729 aaPredicted RBP11.67□□□□□ -0.54
NEDD1-203ENST00000429527 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
NEDD1-203ENST00000429527 SMC1BQ8NDV3 1235 aa11.67□□□□□ -0.54
NEDD1-203ENST00000429527 BSDC1Q9NW68 430 aaPredicted RBP11.67□□□□□ -0.54
NEDD1-203ENST00000429527 PASKQ96RG2 1323 aa11.67□□□□□ -0.54
NEDD1-203ENST00000429527 ZNF541Q9H0D2 1346 aa11.67□□□□□ -0.54
NEDD1-203ENST00000429527 NPHP1O15259 732 aa11.66□□□□□ -0.54
NEDD1-203ENST00000429527 HCLS1P14317 486 aaPredicted RBP11.66□□□□□ -0.54
NEDD1-203ENST00000429527 ANKRD44Q8N8A2 993 aa11.66□□□□□ -0.54
NEDD1-203ENST00000429527 AK9Q5TCS8 1911 aa11.66□□□□□ -0.54
NEDD1-203ENST00000429527 FOXO4P98177 505 aa11.66□□□□□ -0.54
NEDD1-203ENST00000429527 FAM89AQ96GI7 184 aa11.66□□□□□ -0.54
NEDD1-203ENST00000429527 PDLIM2Q96JY6 352 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms