RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 NYXQ9GZU5 481 aa11.74□□□□□ -0.53
HMGCLL1-206ENST00000428842 RIC1Q4ADV7 1423 aa11.73□□□□□ -0.53
HMGCLL1-206ENST00000428842 AAMPQ13685 434 aa11.73□□□□□ -0.53
HMGCLL1-206ENST00000428842 SCARF1Q14162 830 aa11.73□□□□□ -0.53
HMGCLL1-206ENST00000428842 COL11A2P13942 1736 aaPredicted RBP11.73□□□□□ -0.53
HMGCLL1-206ENST00000428842 ST5P78524 1137 aa11.72□□□□□ -0.53
HMGCLL1-206ENST00000428842 CHRNDQ07001 517 aa11.72□□□□□ -0.53
HMGCLL1-206ENST00000428842 BOLA2Q9H3K6 86 aa11.72□□□□□ -0.53
HMGCLL1-206ENST00000428842 A0A1B0GUL7 405 aa11.72□□□□□ -0.53
HMGCLL1-206ENST00000428842 PDE1AP54750 535 aa11.72□□□□□ -0.53
HMGCLL1-206ENST00000428842 TNNI3KQ59H18 835 aa11.72□□□□□ -0.53
HMGCLL1-206ENST00000428842 SLC10A5Q5PT55 438 aa11.72□□□□□ -0.53
HMGCLL1-206ENST00000428842 RPGRQ92834 1020 aaKnown RBP11.72□□□□□ -0.53
HMGCLL1-206ENST00000428842 KIF1BPQ96EK5 621 aa11.72□□□□□ -0.53
HMGCLL1-206ENST00000428842 FPGT-TNNI3KV9GXZ4 949 aa11.72□□□□□ -0.53
HMGCLL1-206ENST00000428842 MX1P20591 662 aa11.71□□□□□ -0.53
HMGCLL1-206ENST00000428842 RPS8P62241 208 aaKnown RBP11.71□□□□□ -0.53
HMGCLL1-206ENST00000428842 FLAD1Q8NFF5 587 aa11.71□□□□□ -0.53
HMGCLL1-206ENST00000428842 NLGN2Q8NFZ4 835 aa11.71□□□□□ -0.53
HMGCLL1-206ENST00000428842 MINPP1Q9UNW1 487 aa11.71□□□□□ -0.53
HMGCLL1-206ENST00000428842 SRGNP10124 158 aa11.71□□□□□ -0.54
HMGCLL1-206ENST00000428842 GYG1P46976 350 aa11.71□□□□□ -0.54
HMGCLL1-206ENST00000428842 SF3B3Q15393 1217 aaKnown RBP11.71□□□□□ -0.54
HMGCLL1-206ENST00000428842 DDX46Q7L014 1031 aaKnown RBP11.71□□□□□ -0.54
HMGCLL1-206ENST00000428842 ANKRD18AQ8IVF6 992 aa11.71□□□□□ -0.54
HMGCLL1-206ENST00000428842 ZBTB47Q9UFB7 747 aaPredicted RBP11.71□□□□□ -0.54
HMGCLL1-206ENST00000428842 IFIT2P09913 472 aaKnown RBP11.7□□□□□ -0.54
HMGCLL1-206ENST00000428842 C2CD5Q86YS7 1000 aa11.7□□□□□ -0.54
HMGCLL1-206ENST00000428842 CLASRPQ8N2M8 674 aaKnown RBP11.7□□□□□ -0.54
HMGCLL1-206ENST00000428842 VGLL2Q8N8G2 317 aa11.7□□□□□ -0.54
HMGCLL1-206ENST00000428842 RILPL2Q969X0 211 aa11.7□□□□□ -0.54
HMGCLL1-206ENST00000428842 IL25Q9H293 177 aa11.7□□□□□ -0.54
HMGCLL1-206ENST00000428842 SALL3Q9BXA9 1300 aa11.7□□□□□ -0.54
HMGCLL1-206ENST00000428842 IGHMBP2P38935 993 aaKnown RBP11.7□□□□□ -0.54
HMGCLL1-206ENST00000428842 PTGER2P43116 358 aa11.7□□□□□ -0.54
HMGCLL1-206ENST00000428842 BCAMP50895 628 aa11.7□□□□□ -0.54
HMGCLL1-206ENST00000428842 ERICH6Q7L0X2 663 aa11.7□□□□□ -0.54
HMGCLL1-206ENST00000428842 ANTXR1Q9H6X2 564 aa11.7□□□□□ -0.54
HMGCLL1-206ENST00000428842 CEP126Q9P2H0 1117 aa11.7□□□□□ -0.54
HMGCLL1-206ENST00000428842 NSFL1CQ9UNZ2 370 aaKnown RBP11.7□□□□□ -0.54
HMGCLL1-206ENST00000428842 SLX4Q8IY92 1834 aa11.7□□□□□ -0.54
HMGCLL1-206ENST00000428842 TRIM6-TRIM34B2RNG4 842 aa11.69□□□□□ -0.54
HMGCLL1-206ENST00000428842 DPEP1P16444 411 aa11.69□□□□□ -0.54
HMGCLL1-206ENST00000428842 PHKA1P46020 1223 aa11.69□□□□□ -0.54
HMGCLL1-206ENST00000428842 PI4K2BQ8TCG2 481 aa11.69□□□□□ -0.54
HMGCLL1-206ENST00000428842 XAGE2Q96GT9 111 aa11.69□□□□□ -0.54
HMGCLL1-206ENST00000428842 DNAJC2Q99543 621 aaKnown RBP11.69□□□□□ -0.54
HMGCLL1-206ENST00000428842 SDSP20132 328 aa11.69□□□□□ -0.54
HMGCLL1-206ENST00000428842 CRY2Q49AN0 593 aa11.69□□□□□ -0.54
HMGCLL1-206ENST00000428842 TBC1D9Q6ZT07 1266 aa11.69□□□□□ -0.54
HMGCLL1-206ENST00000428842 ANKIB1Q9P2G1 1089 aa11.69□□□□□ -0.54
HMGCLL1-206ENST00000428842 MYO5AQ9Y4I1 1855 aaKnown RBP11.68□□□□□ -0.54
HMGCLL1-206ENST00000428842 RIMBP2O15034 1052 aa11.68□□□□□ -0.54
HMGCLL1-206ENST00000428842 PDE8BO95263 885 aa11.68□□□□□ -0.54
HMGCLL1-206ENST00000428842 IL15P40933 162 aaPredicted RBP11.68□□□□□ -0.54
HMGCLL1-206ENST00000428842 GPSM2P81274 684 aa11.68□□□□□ -0.54
HMGCLL1-206ENST00000428842 ATP2B3Q16720 1220 aa11.68□□□□□ -0.54
HMGCLL1-206ENST00000428842 BRIP1Q9BX63 1249 aa11.68□□□□□ -0.54
HMGCLL1-206ENST00000428842 C21orf2O43822 256 aa11.68□□□□□ -0.54
HMGCLL1-206ENST00000428842 KCNA3P22001 575 aa11.68□□□□□ -0.54
HMGCLL1-206ENST00000428842 C8orf34Q49A92 452 aa11.68□□□□□ -0.54
HMGCLL1-206ENST00000428842 RAB11FIP3O75154 756 aa11.67□□□□□ -0.54
HMGCLL1-206ENST00000428842 FKBP4Q02790 459 aaKnown RBP eCLIP11.67□□□□□ -0.54
HMGCLL1-206ENST00000428842 HDAC5Q9UQL6 1122 aa11.67□□□□□ -0.54
HMGCLL1-206ENST00000428842 GRAPQ13588 217 aa11.67□□□□□ -0.54
HMGCLL1-206ENST00000428842 TTC22Q5TAA0 569 aa11.67□□□□□ -0.54
HMGCLL1-206ENST00000428842 PRPF40BQ6NWY9 871 aaKnown RBP11.67□□□□□ -0.54
HMGCLL1-206ENST00000428842 GRAPLQ8TC17 118 aaPredicted RBP11.67□□□□□ -0.54
HMGCLL1-206ENST00000428842 CDC5LQ99459 802 aaKnown RBP11.67□□□□□ -0.54
HMGCLL1-206ENST00000428842 SGIP1Q9BQI5 828 aa11.67□□□□□ -0.54
HMGCLL1-206ENST00000428842 MTFR1LQ9H019 292 aa11.67□□□□□ -0.54
HMGCLL1-206ENST00000428842 KCNQ5Q9NR82 932 aa11.67□□□□□ -0.54
HMGCLL1-206ENST00000428842 POLLQ9UGP5 575 aa11.67□□□□□ -0.54
HMGCLL1-206ENST00000428842 NRXN2Q9P2S2 1712 aa11.66□□□□□ -0.54
HMGCLL1-206ENST00000428842 BSDC1Q9NW68 430 aaPredicted RBP11.66□□□□□ -0.54
HMGCLL1-206ENST00000428842 ZNF609O15014 1411 aa11.66□□□□□ -0.54
HMGCLL1-206ENST00000428842 GORABQ5T7V8 394 aa11.66□□□□□ -0.54
HMGCLL1-206ENST00000428842 H0YIN7 160 aa11.65□□□□□ -0.54
HMGCLL1-206ENST00000428842 MCAMP43121 646 aa11.65□□□□□ -0.54
HMGCLL1-206ENST00000428842 MXD3Q9BW11 206 aa11.65□□□□□ -0.54
HMGCLL1-206ENST00000428842 GOLIM4O00461 696 aa11.65□□□□□ -0.55
HMGCLL1-206ENST00000428842 PPEF1O14829 653 aaPredicted RBP11.65□□□□□ -0.55
HMGCLL1-206ENST00000428842 CIAO1O76071 339 aa11.65□□□□□ -0.55
HMGCLL1-206ENST00000428842 HSP90AB4PQ58FF6 505 aa11.65□□□□□ -0.55
HMGCLL1-206ENST00000428842 CCDC102BQ68D86 513 aa11.65□□□□□ -0.55
HMGCLL1-206ENST00000428842 SEC62Q99442 399 aaKnown RBP11.65□□□□□ -0.55
HMGCLL1-206ENST00000428842 C6orf229H3BNL8 230 aa11.64□□□□□ -0.55
HMGCLL1-206ENST00000428842 ZAP70P43403 619 aa11.64□□□□□ -0.55
HMGCLL1-206ENST00000428842 DOK7Q18PE1 504 aa11.64□□□□□ -0.55
HMGCLL1-206ENST00000428842 ERC1Q8IUD2 1116 aa11.64□□□□□ -0.55
HMGCLL1-206ENST00000428842 RBM17Q96I25 401 aaKnown RBP11.64□□□□□ -0.55
HMGCLL1-206ENST00000428842 ECHDC1Q9NTX5 307 aa11.64□□□□□ -0.55
HMGCLL1-206ENST00000428842 QSER1Q2KHR3 1735 aa11.64□□□□□ -0.55
HMGCLL1-206ENST00000428842 A0A1B0GUL6 1792 aa11.64□□□□□ -0.55
HMGCLL1-206ENST00000428842 KLRG2A4D1S0 409 aaPredicted RBP11.64□□□□□ -0.55
HMGCLL1-206ENST00000428842 UFL1O94874 794 aa11.64□□□□□ -0.55
HMGCLL1-206ENST00000428842 FGFR2P21802 821 aa11.64□□□□□ -0.55
HMGCLL1-206ENST00000428842 PDE6BP35913 854 aa11.64□□□□□ -0.55
HMGCLL1-206ENST00000428842 KCNJ4P48050 445 aa11.64□□□□□ -0.55
HMGCLL1-206ENST00000428842 FHDC1Q9C0D6 1143 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms