RNA–Protein interactions for RNA: ENST00000428778.5

PRRT1-203, Transcript of proline rich transmembrane protein 1, humanhuman

TSL 3

Gene PRRT1, Length 497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRT1-203ENST00000428778 ANXA1P04083 346 aa16.07■□□□□ 0.16
PRRT1-203ENST00000428778 EIF2S2P20042 333 aaKnown RBP16.07■□□□□ 0.16
PRRT1-203ENST00000428778 SF3B3Q15393 1217 aaKnown RBP16.07■□□□□ 0.16
PRRT1-203ENST00000428778 COPS6Q7L5N1 327 aa16.07■□□□□ 0.16
PRRT1-203ENST00000428778 CELF1Q92879 486 aaKnown RBP16.07■□□□□ 0.16
PRRT1-203ENST00000428778 KCNQ5Q9NR82 932 aa16.07■□□□□ 0.16
PRRT1-203ENST00000428778 KIAA0100Q14667 2235 aaKnown RBP16.07■□□□□ 0.16
PRRT1-203ENST00000428778 ASTN2O75129 1339 aaPredicted RBP16.06■□□□□ 0.16
PRRT1-203ENST00000428778 C6orf229H3BNL8 230 aa16.06■□□□□ 0.16
PRRT1-203ENST00000428778 ZNF296Q8WUU4 475 aaPredicted RBP16.06■□□□□ 0.16
PRRT1-203ENST00000428778 TSPYL4Q9UJ04 414 aa16.06■□□□□ 0.16
PRRT1-203ENST00000428778 HDAC9Q9UKV0 1011 aa16.06■□□□□ 0.16
PRRT1-203ENST00000428778 PITPNM2Q9BZ72 1349 aa16.05■□□□□ 0.16
PRRT1-203ENST00000428778 ZNF280AP59817 542 aaPredicted RBP16.05■□□□□ 0.16
PRRT1-203ENST00000428778 GPSM2P81274 684 aa16.05■□□□□ 0.16
PRRT1-203ENST00000428778 DOK7Q18PE1 504 aa16.05■□□□□ 0.16
PRRT1-203ENST00000428778 FBXO46Q6PJ61 603 aaPredicted RBP16.05■□□□□ 0.16
PRRT1-203ENST00000428778 XAGE3Q8WTP9 111 aa16.05■□□□□ 0.16
PRRT1-203ENST00000428778 BABAM1Q9NWV8 329 aa16.05■□□□□ 0.16
PRRT1-203ENST00000428778 LAMB1P07942 1786 aa16.05■□□□□ 0.16
PRRT1-203ENST00000428778 ZNF646O15015 1829 aaPredicted RBP16.04■□□□□ 0.16
PRRT1-203ENST00000428778 ANGEL2Q5VTE6 544 aaKnown RBP16.04■□□□□ 0.16
PRRT1-203ENST00000428778 AGBL3Q8NEM8 1001 aa16.04■□□□□ 0.16
PRRT1-203ENST00000428778 TBC1D16Q8TBP0 767 aa16.04■□□□□ 0.16
PRRT1-203ENST00000428778 NECTIN2Q92692 538 aa16.04■□□□□ 0.16
PRRT1-203ENST00000428778 ZEB1P37275 1124 aaPredicted RBP16.03■□□□□ 0.16
PRRT1-203ENST00000428778 TM4SF4P48230 202 aa16.03■□□□□ 0.16
PRRT1-203ENST00000428778 AIMP1Q12904 312 aaKnown RBP16.03■□□□□ 0.16
PRRT1-203ENST00000428778 SCARF1Q14162 830 aa16.03■□□□□ 0.16
PRRT1-203ENST00000428778 PODXL2Q9NZ53 605 aa16.03■□□□□ 0.16
PRRT1-203ENST00000428778 BRCA2P51587 3418 aa16.03■□□□□ 0.16
PRRT1-203ENST00000428778 GPR25O00155 361 aa16.02■□□□□ 0.16
PRRT1-203ENST00000428778 TBC1D8O95759 1140 aa16.02■□□□□ 0.16
PRRT1-203ENST00000428778 CCER1Q8TC90 406 aaPredicted RBP16.02■□□□□ 0.16
PRRT1-203ENST00000428778 CFHR5Q9BXR6 569 aa16.02■□□□□ 0.16
PRRT1-203ENST00000428778 ZC3H12CQ9C0D7 883 aaKnown RBP16.02■□□□□ 0.16
PRRT1-203ENST00000428778 RSBN1LQ6PCB5 846 aaPredicted RBP16.01■□□□□ 0.15
PRRT1-203ENST00000428778 GMLQ99445 158 aa16.01■□□□□ 0.15
PRRT1-203ENST00000428778 ISCA1Q9BUE6 129 aa16.01■□□□□ 0.15
PRRT1-203ENST00000428778 PNNQ9H307 717 aaKnown RBP16.01■□□□□ 0.15
PRRT1-203ENST00000428778 MAPK8IP3Q9UPT6 1336 aa16■□□□□ 0.15
PRRT1-203ENST00000428778 RPS8P62241 208 aaKnown RBP16■□□□□ 0.15
PRRT1-203ENST00000428778 HABP4Q5JVS0 413 aaKnown RBP16■□□□□ 0.15
PRRT1-203ENST00000428778 PLBD2Q8NHP8 589 aa16■□□□□ 0.15
PRRT1-203ENST00000428778 FAM89AQ96GI7 184 aa16■□□□□ 0.15
PRRT1-203ENST00000428778 MOB2Q70IA6 237 aa15.99■□□□□ 0.15
PRRT1-203ENST00000428778 MYOZ2Q9NPC6 264 aa15.99■□□□□ 0.15
PRRT1-203ENST00000428778 UBE2Q2LH0YL09 131 aa15.98■□□□□ 0.15
PRRT1-203ENST00000428778 FKTNO75072 461 aa15.98■□□□□ 0.15
PRRT1-203ENST00000428778 UFL1O94874 794 aa15.98■□□□□ 0.15
PRRT1-203ENST00000428778 USP17L8P0C7I0 530 aa15.98■□□□□ 0.15
PRRT1-203ENST00000428778 G3V3G9 751 aa15.97■□□□□ 0.15
PRRT1-203ENST00000428778 SREBF2Q12772 1141 aa15.97■□□□□ 0.15
PRRT1-203ENST00000428778 TRIM28Q13263 835 aaKnown RBP15.97■□□□□ 0.15
PRRT1-203ENST00000428778 DCAF8Q5TAQ9 597 aa15.97■□□□□ 0.15
PRRT1-203ENST00000428778 ANKRD13DQ6ZTN6 518 aa15.97■□□□□ 0.15
PRRT1-203ENST00000428778 GGA1Q9UJY5 639 aa15.97■□□□□ 0.15
PRRT1-203ENST00000428778 MYH3P11055 1940 aa15.97■□□□□ 0.15
PRRT1-203ENST00000428778 CEP290O15078 2479 aa15.96■□□□□ 0.15
PRRT1-203ENST00000428778 IRS4O14654 1257 aaPredicted RBP15.96■□□□□ 0.15
PRRT1-203ENST00000428778 ZNF428Q96B54 188 aa15.96■□□□□ 0.15
PRRT1-203ENST00000428778 ANKIB1Q9P2G1 1089 aa15.96■□□□□ 0.15
PRRT1-203ENST00000428778 ATP5J2-PTCD1G3V325 749 aa15.95■□□□□ 0.14
PRRT1-203ENST00000428778 RIPK4P57078 832 aa15.95■□□□□ 0.14
PRRT1-203ENST00000428778 INTS3Q68E01 1043 aaKnown RBP15.95■□□□□ 0.14
PRRT1-203ENST00000428778 PODNQ7Z5L7 613 aa15.95■□□□□ 0.14
PRRT1-203ENST00000428778 CHPF2Q9P2E5 772 aa15.95■□□□□ 0.14
PRRT1-203ENST00000428778 ECM29Q5VYK3 1845 aa15.95■□□□□ 0.14
PRRT1-203ENST00000428778 SPEF2Q9C093 1822 aa15.95■□□□□ 0.14
PRRT1-203ENST00000428778 USP17L3A6NCW0 530 aa15.94■□□□□ 0.14
PRRT1-203ENST00000428778 USP17L4A6NCW7 530 aa15.94■□□□□ 0.14
PRRT1-203ENST00000428778 LMOD3Q0VAK6 560 aa15.94■□□□□ 0.14
PRRT1-203ENST00000428778 USP17L1Q7RTZ2 530 aa15.94■□□□□ 0.14
PRRT1-203ENST00000428778 R3HDMLQ9H3Y0 253 aa15.94■□□□□ 0.14
PRRT1-203ENST00000428778 SEC31BQ9NQW1 1179 aa15.94■□□□□ 0.14
PRRT1-203ENST00000428778 ALDH1A1P00352 501 aa15.93■□□□□ 0.14
PRRT1-203ENST00000428778 HOXB7P09629 217 aa15.93■□□□□ 0.14
PRRT1-203ENST00000428778 HSP90B1P14625 803 aaKnown RBP15.93■□□□□ 0.14
PRRT1-203ENST00000428778 NF2P35240 595 aa15.93■□□□□ 0.14
PRRT1-203ENST00000428778 TTLL12Q14166 644 aaPredicted RBP15.93■□□□□ 0.14
PRRT1-203ENST00000428778 NBPF9Q3BBW0 867 aa15.93■□□□□ 0.14
PRRT1-203ENST00000428778 RTL5Q5HYW3 569 aaPredicted RBP15.93■□□□□ 0.14
PRRT1-203ENST00000428778 PRAMEF18Q5VWM3 479 aa15.93■□□□□ 0.14
PRRT1-203ENST00000428778 DBF4Q9UBU7 674 aaPredicted RBP15.93■□□□□ 0.14
PRRT1-203ENST00000428778 SCAF8Q9UPN6 1271 aaKnown RBP15.93■□□□□ 0.14
PRRT1-203ENST00000428778 XDHP47989 1333 aa15.93■□□□□ 0.14
PRRT1-203ENST00000428778 CHL1O00533 1208 aa15.92■□□□□ 0.14
PRRT1-203ENST00000428778 KRT24Q2M2I5 525 aa15.92■□□□□ 0.14
PRRT1-203ENST00000428778 ZBTB38Q8NAP3 1195 aaPredicted RBP15.92■□□□□ 0.14
PRRT1-203ENST00000428778 TRIOBPQ9H2D6 2365 aa15.92■□□□□ 0.14
PRRT1-203ENST00000428778 POTEFA5A3E0 1075 aa15.91■□□□□ 0.14
PRRT1-203ENST00000428778 WNT10BO00744 389 aa15.91■□□□□ 0.14
PRRT1-203ENST00000428778 TMPOP42166 694 aaKnown RBP15.91■□□□□ 0.14
PRRT1-203ENST00000428778 MMP14P50281 582 aa15.91■□□□□ 0.14
PRRT1-203ENST00000428778 FXR1P51114 621 aaKnown RBP eCLIP15.91■□□□□ 0.14
PRRT1-203ENST00000428778 PTPN12Q05209 780 aaKnown RBP15.91■□□□□ 0.14
PRRT1-203ENST00000428778 MKRN3Q13064 507 aaKnown RBP15.91■□□□□ 0.14
PRRT1-203ENST00000428778 LDLRAD1Q5T700 205 aa15.91■□□□□ 0.14
PRRT1-203ENST00000428778 HDGFL1Q5TGJ6 251 aa15.91■□□□□ 0.14
PRRT1-203ENST00000428778 ARMC9Q7Z3E5 817 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms