RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 ZNF646O15015 1829 aaPredicted RBP13.57□□□□□ -0.24
RDH11-202ENST00000428130 NEFMP07197 916 aa13.57□□□□□ -0.24
RDH11-202ENST00000428130 TCIRG1Q13488 830 aa13.57□□□□□ -0.24
RDH11-202ENST00000428130 COPS6Q7L5N1 327 aa13.57□□□□□ -0.24
RDH11-202ENST00000428130 SULF1Q8IWU6 871 aa13.57□□□□□ -0.24
RDH11-202ENST00000428130 CELF1Q92879 486 aaKnown RBP13.57□□□□□ -0.24
RDH11-202ENST00000428130 POLLQ9UGP5 575 aa13.57□□□□□ -0.24
RDH11-202ENST00000428130 NSFL1CQ9UNZ2 370 aaKnown RBP13.57□□□□□ -0.24
RDH11-202ENST00000428130 ZNF609O15014 1411 aa13.56□□□□□ -0.24
RDH11-202ENST00000428130 RBBP6Q7Z6E9 1792 aaKnown RBP13.56□□□□□ -0.24
RDH11-202ENST00000428130 C6orf229H3BNL8 230 aa13.56□□□□□ -0.24
RDH11-202ENST00000428130 PKN2Q16513 984 aaKnown RBP13.56□□□□□ -0.24
RDH11-202ENST00000428130 DOK7Q18PE1 504 aa13.56□□□□□ -0.24
RDH11-202ENST00000428130 CCER1Q8TC90 406 aaPredicted RBP13.56□□□□□ -0.24
RDH11-202ENST00000428130 TSPYL4Q9UJ04 414 aa13.56□□□□□ -0.24
RDH11-202ENST00000428130 BRCA2P51587 3418 aa13.56□□□□□ -0.24
RDH11-202ENST00000428130 GPSM2P81274 684 aa13.55□□□□□ -0.24
RDH11-202ENST00000428130 AIMP1Q12904 312 aaKnown RBP13.55□□□□□ -0.24
RDH11-202ENST00000428130 XAGE3Q8WTP9 111 aa13.55□□□□□ -0.24
RDH11-202ENST00000428130 ZNF296Q8WUU4 475 aaPredicted RBP13.55□□□□□ -0.24
RDH11-202ENST00000428130 LAMB1P07942 1786 aa13.54□□□□□ -0.24
RDH11-202ENST00000428130 VIL1P09327 827 aaKnown RBP13.54□□□□□ -0.24
RDH11-202ENST00000428130 FKBP1BP68106 108 aa13.54□□□□□ -0.24
RDH11-202ENST00000428130 SF3B3Q15393 1217 aaKnown RBP13.54□□□□□ -0.24
RDH11-202ENST00000428130 ANGEL2Q5VTE6 544 aaKnown RBP13.54□□□□□ -0.24
RDH11-202ENST00000428130 TBC1D16Q8TBP0 767 aa13.54□□□□□ -0.24
RDH11-202ENST00000428130 ZNF428Q96B54 188 aa13.54□□□□□ -0.24
RDH11-202ENST00000428130 EYA3Q99504 573 aa13.54□□□□□ -0.24
RDH11-202ENST00000428130 TBC1D8O95759 1140 aa13.53□□□□□ -0.24
RDH11-202ENST00000428130 ZNF280AP59817 542 aaPredicted RBP13.53□□□□□ -0.24
RDH11-202ENST00000428130 NECTIN2Q92692 538 aa13.53□□□□□ -0.24
RDH11-202ENST00000428130 HDAC9Q9UKV0 1011 aa13.53□□□□□ -0.24
RDH11-202ENST00000428130 SCARF1Q14162 830 aa13.52□□□□□ -0.25
RDH11-202ENST00000428130 GCC1Q96CN9 775 aa13.52□□□□□ -0.25
RDH11-202ENST00000428130 SPEF2Q9C093 1822 aa13.52□□□□□ -0.25
RDH11-202ENST00000428130 PITPNM2Q9BZ72 1349 aa13.51□□□□□ -0.25
RDH11-202ENST00000428130 MAPK8IP3Q9UPT6 1336 aa13.51□□□□□ -0.25
RDH11-202ENST00000428130 NOM1Q5C9Z4 860 aaKnown RBP13.51□□□□□ -0.25
RDH11-202ENST00000428130 FBXO46Q6PJ61 603 aaPredicted RBP13.51□□□□□ -0.25
RDH11-202ENST00000428130 MOB2Q70IA6 237 aa13.51□□□□□ -0.25
RDH11-202ENST00000428130 FAM89AQ96GI7 184 aa13.51□□□□□ -0.25
RDH11-202ENST00000428130 ISCA1Q9BUE6 129 aa13.51□□□□□ -0.25
RDH11-202ENST00000428130 ZC3H12CQ9C0D7 883 aaKnown RBP13.51□□□□□ -0.25
RDH11-202ENST00000428130 BABAM1Q9NWV8 329 aa13.51□□□□□ -0.25
RDH11-202ENST00000428130 PODXL2Q9NZ53 605 aa13.51□□□□□ -0.25
RDH11-202ENST00000428130 GPR25O00155 361 aa13.5□□□□□ -0.25
RDH11-202ENST00000428130 TM4SF4P48230 202 aa13.5□□□□□ -0.25
RDH11-202ENST00000428130 RSBN1LQ6PCB5 846 aaPredicted RBP13.5□□□□□ -0.25
RDH11-202ENST00000428130 AGBL3Q8NEM8 1001 aa13.5□□□□□ -0.25
RDH11-202ENST00000428130 UBE2Q2LH0YL09 131 aa13.49□□□□□ -0.25
RDH11-202ENST00000428130 RPS8P62241 208 aaKnown RBP13.49□□□□□ -0.25
RDH11-202ENST00000428130 NCBP3Q53F19 620 aaKnown RBP13.49□□□□□ -0.25
RDH11-202ENST00000428130 PLBD2Q8NHP8 589 aa13.49□□□□□ -0.25
RDH11-202ENST00000428130 GMLQ99445 158 aa13.49□□□□□ -0.25
RDH11-202ENST00000428130 MYOZ2Q9NPC6 264 aa13.49□□□□□ -0.25
RDH11-202ENST00000428130 SCAF8Q9UPN6 1271 aaKnown RBP13.49□□□□□ -0.25
RDH11-202ENST00000428130 MYH3P11055 1940 aa13.49□□□□□ -0.25
RDH11-202ENST00000428130 ATP5J2-PTCD1G3V325 749 aa13.48□□□□□ -0.25
RDH11-202ENST00000428130 UFL1O94874 794 aa13.48□□□□□ -0.25
RDH11-202ENST00000428130 HABP4Q5JVS0 413 aaKnown RBP13.48□□□□□ -0.25
RDH11-202ENST00000428130 CFHR5Q9BXR6 569 aa13.48□□□□□ -0.25
RDH11-202ENST00000428130 PNNQ9H307 717 aaKnown RBP13.48□□□□□ -0.25
RDH11-202ENST00000428130 CHPF2Q9P2E5 772 aa13.48□□□□□ -0.25
RDH11-202ENST00000428130 ECM29Q5VYK3 1845 aa13.48□□□□□ -0.25
RDH11-202ENST00000428130 G3V3G9 751 aa13.47□□□□□ -0.25
RDH11-202ENST00000428130 IRS4O14654 1257 aaPredicted RBP13.47□□□□□ -0.25
RDH11-202ENST00000428130 USP17L8P0C7I0 530 aa13.47□□□□□ -0.25
RDH11-202ENST00000428130 RIPK4P57078 832 aa13.47□□□□□ -0.25
RDH11-202ENST00000428130 KRT24Q2M2I5 525 aa13.47□□□□□ -0.25
RDH11-202ENST00000428130 RTL5Q5HYW3 569 aaPredicted RBP13.47□□□□□ -0.25
RDH11-202ENST00000428130 DCAF8Q5TAQ9 597 aa13.47□□□□□ -0.25
RDH11-202ENST00000428130 PRAMEF18Q5VWM3 479 aa13.47□□□□□ -0.25
RDH11-202ENST00000428130 ANKRD13DQ6ZTN6 518 aa13.47□□□□□ -0.25
RDH11-202ENST00000428130 GGA1Q9UJY5 639 aa13.47□□□□□ -0.25
RDH11-202ENST00000428130 FKTNO75072 461 aa13.46□□□□□ -0.25
RDH11-202ENST00000428130 R3HDMLQ9H3Y0 253 aa13.46□□□□□ -0.25
RDH11-202ENST00000428130 SEC31BQ9NQW1 1179 aa13.46□□□□□ -0.25
RDH11-202ENST00000428130 ANKIB1Q9P2G1 1089 aa13.46□□□□□ -0.25
RDH11-202ENST00000428130 SREBF2Q12772 1141 aa13.45□□□□□ -0.26
RDH11-202ENST00000428130 MKRN3Q13064 507 aaKnown RBP13.45□□□□□ -0.26
RDH11-202ENST00000428130 NBPF9Q3BBW0 867 aa13.45□□□□□ -0.26
RDH11-202ENST00000428130 KIAA0100Q14667 2235 aaKnown RBP13.45□□□□□ -0.26
RDH11-202ENST00000428130 SZT2Q5T011 3432 aa13.45□□□□□ -0.26
RDH11-202ENST00000428130 USP17L3A6NCW0 530 aa13.44□□□□□ -0.26
RDH11-202ENST00000428130 USP17L4A6NCW7 530 aa13.44□□□□□ -0.26
RDH11-202ENST00000428130 TRIM28Q13263 835 aaKnown RBP13.44□□□□□ -0.26
RDH11-202ENST00000428130 TTLL12Q14166 644 aaPredicted RBP13.44□□□□□ -0.26
RDH11-202ENST00000428130 USP17L1Q7RTZ2 530 aa13.44□□□□□ -0.26
RDH11-202ENST00000428130 POTEFA5A3E0 1075 aa13.43□□□□□ -0.26
RDH11-202ENST00000428130 CHL1O00533 1208 aa13.43□□□□□ -0.26
RDH11-202ENST00000428130 TMPOP42166 694 aaKnown RBP13.43□□□□□ -0.26
RDH11-202ENST00000428130 LMOD3Q0VAK6 560 aa13.43□□□□□ -0.26
RDH11-202ENST00000428130 HDGFL1Q5TGJ6 251 aa13.43□□□□□ -0.26
RDH11-202ENST00000428130 PODNQ7Z5L7 613 aa13.43□□□□□ -0.26
RDH11-202ENST00000428130 DBF4Q9UBU7 674 aaPredicted RBP13.43□□□□□ -0.26
RDH11-202ENST00000428130 XDHP47989 1333 aa13.42□□□□□ -0.26
RDH11-202ENST00000428130 WNT10BO00744 389 aa13.42□□□□□ -0.26
RDH11-202ENST00000428130 NF2P35240 595 aa13.42□□□□□ -0.26
RDH11-202ENST00000428130 PTPN12Q05209 780 aaKnown RBP13.42□□□□□ -0.26
RDH11-202ENST00000428130 C1QBPQ07021 282 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms