RNA–Protein interactions for RNA: ENST00000427683.2

EFNA4-203, Transcript of ephrin A4, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFNA4, Length 1,052 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4-203ENST00000427683 FAM161AQ3B820 660 aa17.22■□□□□ 0.35
EFNA4-203ENST00000427683 RPAP2Q8IXW5 612 aaPredicted RBP17.22■□□□□ 0.35
EFNA4-203ENST00000427683 SSH3Q8TE77 659 aa17.22■□□□□ 0.35
EFNA4-203ENST00000427683 RPGRQ92834 1020 aaKnown RBP17.22■□□□□ 0.35
EFNA4-203ENST00000427683 C7orf43Q8WVR3 580 aa17.21■□□□□ 0.35
EFNA4-203ENST00000427683 CELF1Q92879 486 aaKnown RBP17.21■□□□□ 0.35
EFNA4-203ENST00000427683 RBM17Q96I25 401 aaKnown RBP17.21■□□□□ 0.35
EFNA4-203ENST00000427683 CCDC85AQ96PX6 553 aaPredicted RBP17.21■□□□□ 0.35
EFNA4-203ENST00000427683 TAOK3Q9H2K8 898 aa17.21■□□□□ 0.35
EFNA4-203ENST00000427683 LTBP3Q9NS15 1303 aa17.21■□□□□ 0.34
EFNA4-203ENST00000427683 ALDH1B1P30837 517 aa17.2■□□□□ 0.34
EFNA4-203ENST00000427683 PTPN12Q05209 780 aaKnown RBP17.2■□□□□ 0.34
EFNA4-203ENST00000427683 GRAPQ13588 217 aa17.2■□□□□ 0.34
EFNA4-203ENST00000427683 CCDC93Q567U6 631 aa17.2■□□□□ 0.34
EFNA4-203ENST00000427683 DDX46Q7L014 1031 aaKnown RBP17.2■□□□□ 0.34
EFNA4-203ENST00000427683 GRAPLQ8TC17 118 aaPredicted RBP17.2■□□□□ 0.34
EFNA4-203ENST00000427683 DICER1Q9UPY3 1922 aaKnown RBP17.19■□□□□ 0.34
EFNA4-203ENST00000427683 SRGAP3O43295 1099 aa17.19■□□□□ 0.34
EFNA4-203ENST00000427683 BBOX1O75936 387 aa17.19■□□□□ 0.34
EFNA4-203ENST00000427683 RPS8P62241 208 aaKnown RBP17.19■□□□□ 0.34
EFNA4-203ENST00000427683 IFIT5Q13325 482 aaKnown RBP17.19■□□□□ 0.34
EFNA4-203ENST00000427683 OLFM4Q6UX06 510 aa17.19■□□□□ 0.34
EFNA4-203ENST00000427683 COPRSQ9NQ92 184 aa17.19■□□□□ 0.34
EFNA4-203ENST00000427683 ANKRD18BA2A2Z9 1011 aa17.18■□□□□ 0.34
EFNA4-203ENST00000427683 CCDC57Q2TAC2 916 aa17.18■□□□□ 0.34
EFNA4-203ENST00000427683 BSDC1Q9NW68 430 aaPredicted RBP17.18■□□□□ 0.34
EFNA4-203ENST00000427683 GLTPD2A6NH11 291 aa17.17■□□□□ 0.34
EFNA4-203ENST00000427683 POTECB2RU33 542 aa17.17■□□□□ 0.34
EFNA4-203ENST00000427683 KLHDC4Q8TBB5 520 aa17.17■□□□□ 0.34
EFNA4-203ENST00000427683 ZNF594Q96JF6 807 aaPredicted RBP17.17■□□□□ 0.34
EFNA4-203ENST00000427683 CDC5LQ99459 802 aaKnown RBP17.17■□□□□ 0.34
EFNA4-203ENST00000427683 SLC34A2O95436 690 aa17.16■□□□□ 0.34
EFNA4-203ENST00000427683 VEGFAP15692 232 aaPredicted RBP17.16■□□□□ 0.34
EFNA4-203ENST00000427683 SLC51AQ86UW1 340 aa17.16■□□□□ 0.34
EFNA4-203ENST00000427683 NOP58Q9Y2X3 529 aaKnown RBP17.16■□□□□ 0.34
EFNA4-203ENST00000427683 CHMP3Q9Y3E7 222 aa17.16■□□□□ 0.34
EFNA4-203ENST00000427683 RIPOR2Q9Y4F9 1068 aa17.16■□□□□ 0.34
EFNA4-203ENST00000427683 SNED1Q8TER0 1413 aa17.15■□□□□ 0.34
EFNA4-203ENST00000427683 FKBP4Q02790 459 aaKnown RBP eCLIP17.15■□□□□ 0.34
EFNA4-203ENST00000427683 HDAC1Q13547 482 aaPredicted RBP17.15■□□□□ 0.34
EFNA4-203ENST00000427683 ATG9AQ7Z3C6 839 aa17.15■□□□□ 0.34
EFNA4-203ENST00000427683 TMC4Q7Z404 712 aa17.15■□□□□ 0.34
EFNA4-203ENST00000427683 ANKRD18AQ8IVF6 992 aa17.15■□□□□ 0.34
EFNA4-203ENST00000427683 SP8Q8IXZ3 490 aa17.15■□□□□ 0.34
EFNA4-203ENST00000427683 RTKN2Q8IZC4 609 aa17.15■□□□□ 0.34
EFNA4-203ENST00000427683 PUS3Q9BZE2 481 aaKnown RBP17.15■□□□□ 0.34
EFNA4-203ENST00000427683 FBXO3Q9UK99 471 aa17.15■□□□□ 0.34
EFNA4-203ENST00000427683 PA2G4Q9UQ80 394 aaKnown RBP17.15■□□□□ 0.34
EFNA4-203ENST00000427683 MYH3P11055 1940 aa17.15■□□□□ 0.34
EFNA4-203ENST00000427683 PPEF1O14829 653 aaPredicted RBP17.14■□□□□ 0.33
EFNA4-203ENST00000427683 ERICH6BQ5W0A0 696 aa17.14■□□□□ 0.33
EFNA4-203ENST00000427683 MINPP1Q9UNW1 487 aa17.14■□□□□ 0.33
EFNA4-203ENST00000427683 ATP6V0A2Q9Y487 856 aa17.14■□□□□ 0.33
EFNA4-203ENST00000427683 CIAO1O76071 339 aa17.13■□□□□ 0.33
EFNA4-203ENST00000427683 IGHMBP2P38935 993 aaKnown RBP17.13■□□□□ 0.33
EFNA4-203ENST00000427683 LRRC24Q50LG9 513 aa17.13■□□□□ 0.33
EFNA4-203ENST00000427683 LDHAL6AQ6ZMR3 332 aa17.13■□□□□ 0.33
EFNA4-203ENST00000427683 ZNF277Q9NRM2 450 aaPredicted RBP17.13■□□□□ 0.33
EFNA4-203ENST00000427683 EYA2O00167 538 aa17.12■□□□□ 0.33
EFNA4-203ENST00000427683 IGHDP01880 384 aa17.12■□□□□ 0.33
EFNA4-203ENST00000427683 CC2D2BQ6DHV5 1058 aa17.12■□□□□ 0.33
EFNA4-203ENST00000427683 DCTPP1Q9H773 170 aa17.12■□□□□ 0.33
EFNA4-203ENST00000427683 FOXN1O15353 648 aa17.11■□□□□ 0.33
EFNA4-203ENST00000427683 HMMRO75330 724 aa17.11■□□□□ 0.33
EFNA4-203ENST00000427683 DPY19L2Q6NUT2 758 aa17.11■□□□□ 0.33
EFNA4-203ENST00000427683 VGLL2Q8N8G2 317 aa17.11■□□□□ 0.33
EFNA4-203ENST00000427683 PSMD1Q99460 953 aa17.11■□□□□ 0.33
EFNA4-203ENST00000427683 MPHOSPH8Q99549 860 aa17.11■□□□□ 0.33
EFNA4-203ENST00000427683 PODXL2Q9NZ53 605 aa17.11■□□□□ 0.33
EFNA4-203ENST00000427683 MKRN1Q9UHC7 482 aaKnown RBP17.11■□□□□ 0.33
EFNA4-203ENST00000427683 TAF1P21675 1872 aa17.1■□□□□ 0.33
EFNA4-203ENST00000427683 NEFLP07196 543 aa17.1■□□□□ 0.33
EFNA4-203ENST00000427683 POTEIP0CG38 1075 aa17.1■□□□□ 0.33
EFNA4-203ENST00000427683 POTEJP0CG39 1038 aa17.1■□□□□ 0.33
EFNA4-203ENST00000427683 TMX4Q9H1E5 349 aaPredicted RBP17.1■□□□□ 0.33
EFNA4-203ENST00000427683 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.1■□□□□ 0.33
EFNA4-203ENST00000427683 SASH1O94885 1247 aa17.09■□□□□ 0.33
EFNA4-203ENST00000427683 IL15P40933 162 aaPredicted RBP17.09■□□□□ 0.33
EFNA4-203ENST00000427683 IARSP41252 1262 aaKnown RBP17.09■□□□□ 0.33
EFNA4-203ENST00000427683 CHRNDQ07001 517 aa17.09■□□□□ 0.33
EFNA4-203ENST00000427683 GRIPAP1Q4V328 841 aa17.09■□□□□ 0.33
EFNA4-203ENST00000427683 TAF7LQ5H9L4 462 aa17.09■□□□□ 0.33
EFNA4-203ENST00000427683 SIL1Q9H173 461 aa17.09■□□□□ 0.33
EFNA4-203ENST00000427683 CREBZFQ9NS37 354 aa17.09■□□□□ 0.33
EFNA4-203ENST00000427683 CNTNAP1P78357 1384 aa17.09■□□□□ 0.33
EFNA4-203ENST00000427683 LRRC37AA6NMS7 1700 aa17.08■□□□□ 0.32
EFNA4-203ENST00000427683 MROH5Q6ZUA9 1318 aa17.08■□□□□ 0.32
EFNA4-203ENST00000427683 WTIPA6NIX2 430 aaPredicted RBP17.08■□□□□ 0.32
EFNA4-203ENST00000427683 SURF6O75683 361 aaKnown RBP17.08■□□□□ 0.32
EFNA4-203ENST00000427683 GPSM2P81274 684 aa17.08■□□□□ 0.32
EFNA4-203ENST00000427683 RTFDC1Q9BY42 306 aaPredicted RBP17.08■□□□□ 0.32
EFNA4-203ENST00000427683 CNNM1Q9NRU3 951 aa17.08■□□□□ 0.32
EFNA4-203ENST00000427683 IRS2Q9Y4H2 1338 aa17.07■□□□□ 0.32
EFNA4-203ENST00000427683 RWDD1Q9H446 243 aaPredicted RBP17.07■□□□□ 0.32
EFNA4-203ENST00000427683 EXOC6BQ9Y2D4 811 aa17.07■□□□□ 0.32
EFNA4-203ENST00000427683 ZNF541Q9H0D2 1346 aa17.06■□□□□ 0.32
EFNA4-203ENST00000427683 DDNO94850 711 aaPredicted RBP17.06■□□□□ 0.32
EFNA4-203ENST00000427683 PDE8BO95263 885 aa17.06■□□□□ 0.32
EFNA4-203ENST00000427683 FGFR2P21802 821 aa17.06■□□□□ 0.32
EFNA4-203ENST00000427683 G3BP1Q13283 466 aaKnown RBP eCLIP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms