RNA–Protein interactions for RNA: ENST00000422887.1

ECHDC3-203, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-203ENST00000422887 COPRSQ9NQ92 184 aa12.41□□□□□ -0.42
ECHDC3-203ENST00000422887 BCS1LQ9Y276 419 aa12.41□□□□□ -0.42
ECHDC3-203ENST00000422887 CIAO1O76071 339 aa12.4□□□□□ -0.42
ECHDC3-203ENST00000422887 RFX5P48382 616 aaPredicted RBP12.4□□□□□ -0.42
ECHDC3-203ENST00000422887 POLA2Q14181 598 aa12.4□□□□□ -0.42
ECHDC3-203ENST00000422887 LDHAL6AQ6ZMR3 332 aa12.4□□□□□ -0.42
ECHDC3-203ENST00000422887 RTKN2Q8IZC4 609 aa12.4□□□□□ -0.42
ECHDC3-203ENST00000422887 MROH5Q6ZUA9 1318 aa12.39□□□□□ -0.43
ECHDC3-203ENST00000422887 PNMA6EA0A0J9YXQ4 647 aa12.39□□□□□ -0.43
ECHDC3-203ENST00000422887 DCAF8L1A6NGE4 600 aa12.39□□□□□ -0.43
ECHDC3-203ENST00000422887 GRIN3BO60391 1043 aa12.39□□□□□ -0.43
ECHDC3-203ENST00000422887 PTPN12Q05209 780 aaKnown RBP12.39□□□□□ -0.43
ECHDC3-203ENST00000422887 EXOC6Q8TAG9 804 aa12.39□□□□□ -0.43
ECHDC3-203ENST00000422887 ANKRD2Q9GZV1 360 aa12.39□□□□□ -0.43
ECHDC3-203ENST00000422887 CNNM1Q9NRU3 951 aa12.39□□□□□ -0.43
ECHDC3-203ENST00000422887 XDHP47989 1333 aa12.38□□□□□ -0.43
ECHDC3-203ENST00000422887 EYA2O00167 538 aa12.38□□□□□ -0.43
ECHDC3-203ENST00000422887 C21orf2O43822 256 aa12.38□□□□□ -0.43
ECHDC3-203ENST00000422887 IL15P40933 162 aaPredicted RBP12.38□□□□□ -0.43
ECHDC3-203ENST00000422887 HSP90AB4PQ58FF6 505 aa12.38□□□□□ -0.43
ECHDC3-203ENST00000422887 PODXL2Q9NZ53 605 aa12.38□□□□□ -0.43
ECHDC3-203ENST00000422887 AKAP11Q9UKA4 1901 aa12.38□□□□□ -0.43
ECHDC3-203ENST00000422887 MYO5AQ9Y4I1 1855 aaKnown RBP12.38□□□□□ -0.43
ECHDC3-203ENST00000422887 LTBP3Q9NS15 1303 aa12.37□□□□□ -0.43
ECHDC3-203ENST00000422887 PRELPP51888 382 aa12.37□□□□□ -0.43
ECHDC3-203ENST00000422887 GPR162Q16538 588 aa12.37□□□□□ -0.43
ECHDC3-203ENST00000422887 ERICH6BQ5W0A0 696 aa12.37□□□□□ -0.43
ECHDC3-203ENST00000422887 ERC1Q8IUD2 1116 aa12.37□□□□□ -0.43
ECHDC3-203ENST00000422887 SUPT20HQ8NEM7 779 aa12.37□□□□□ -0.43
ECHDC3-203ENST00000422887 ZNF594Q96JF6 807 aaPredicted RBP12.37□□□□□ -0.43
ECHDC3-203ENST00000422887 PSMD1Q99460 953 aa12.37□□□□□ -0.43
ECHDC3-203ENST00000422887 MINPP1Q9UNW1 487 aa12.37□□□□□ -0.43
ECHDC3-203ENST00000422887 NOP58Q9Y2X3 529 aaKnown RBP12.37□□□□□ -0.43
ECHDC3-203ENST00000422887 NFKBIEO00221 500 aa12.36□□□□□ -0.43
ECHDC3-203ENST00000422887 IRX6P78412 446 aaPredicted RBP12.36□□□□□ -0.43
ECHDC3-203ENST00000422887 FKBP4Q02790 459 aaKnown RBP eCLIP12.36□□□□□ -0.43
ECHDC3-203ENST00000422887 CHRNDQ07001 517 aa12.36□□□□□ -0.43
ECHDC3-203ENST00000422887 HDAC1Q13547 482 aaPredicted RBP12.36□□□□□ -0.43
ECHDC3-203ENST00000422887 DPP8Q6V1X1 898 aaPredicted RBP12.36□□□□□ -0.43
ECHDC3-203ENST00000422887 PELP1Q8IZL8 1130 aaKnown RBP12.36□□□□□ -0.43
ECHDC3-203ENST00000422887 MPNDQ8N594 471 aa12.36□□□□□ -0.43
ECHDC3-203ENST00000422887 VPS33BQ9H267 617 aa12.36□□□□□ -0.43
ECHDC3-203ENST00000422887 TAOK3Q9H2K8 898 aa12.36□□□□□ -0.43
ECHDC3-203ENST00000422887 RIPOR2Q9Y4F9 1068 aa12.36□□□□□ -0.43
ECHDC3-203ENST00000422887 ECM29Q5VYK3 1845 aa12.35□□□□□ -0.43
ECHDC3-203ENST00000422887 SURF6O75683 361 aaKnown RBP12.35□□□□□ -0.43
ECHDC3-203ENST00000422887 ATP2B4P23634 1241 aa12.35□□□□□ -0.43
ECHDC3-203ENST00000422887 G3BP1Q13283 466 aaKnown RBP eCLIP12.35□□□□□ -0.43
ECHDC3-203ENST00000422887 METTL24Q5JXM2 366 aa12.35□□□□□ -0.43
ECHDC3-203ENST00000422887 OLFM4Q6UX06 510 aa12.35□□□□□ -0.43
ECHDC3-203ENST00000422887 SIRT2Q8IXJ6 389 aa12.35□□□□□ -0.43
ECHDC3-203ENST00000422887 KLHDC4Q8TBB5 520 aa12.35□□□□□ -0.43
ECHDC3-203ENST00000422887 EYA3Q99504 573 aa12.35□□□□□ -0.43
ECHDC3-203ENST00000422887 RTFDC1Q9BY42 306 aaPredicted RBP12.35□□□□□ -0.43
ECHDC3-203ENST00000422887 SIL1Q9H173 461 aa12.35□□□□□ -0.43
ECHDC3-203ENST00000422887 ANKIB1Q9P2G1 1089 aa12.35□□□□□ -0.43
ECHDC3-203ENST00000422887 GGA1Q9UJY5 639 aa12.35□□□□□ -0.43
ECHDC3-203ENST00000422887 WWC3Q9ULE0 1092 aa12.35□□□□□ -0.43
ECHDC3-203ENST00000422887 NSFL1CQ9UNZ2 370 aaKnown RBP12.35□□□□□ -0.43
ECHDC3-203ENST00000422887 PA2G4Q9UQ80 394 aaKnown RBP12.35□□□□□ -0.43
ECHDC3-203ENST00000422887 LEMD3Q9Y2U8 911 aa12.35□□□□□ -0.43
ECHDC3-203ENST00000422887 PCDHB15Q9Y5E8 787 aa12.35□□□□□ -0.43
ECHDC3-203ENST00000422887 SCN4AP35499 1836 aa12.34□□□□□ -0.43
ECHDC3-203ENST00000422887 WDR90Q96KV7 1748 aa12.34□□□□□ -0.43
ECHDC3-203ENST00000422887 MED23Q9ULK4 1368 aa12.34□□□□□ -0.43
ECHDC3-203ENST00000422887 RAB11FIP3O75154 756 aa12.34□□□□□ -0.43
ECHDC3-203ENST00000422887 PDE8BO95263 885 aa12.34□□□□□ -0.43
ECHDC3-203ENST00000422887 OS9Q13438 667 aaPredicted RBP12.34□□□□□ -0.43
ECHDC3-203ENST00000422887 LRRC24Q50LG9 513 aa12.34□□□□□ -0.43
ECHDC3-203ENST00000422887 ATG9AQ7Z3C6 839 aa12.34□□□□□ -0.43
ECHDC3-203ENST00000422887 CEP126Q9P2H0 1117 aa12.34□□□□□ -0.43
ECHDC3-203ENST00000422887 ZNF219Q9P2Y4 722 aaPredicted RBP12.34□□□□□ -0.43
ECHDC3-203ENST00000422887 IRS2Q9Y4H2 1338 aa12.34□□□□□ -0.43
ECHDC3-203ENST00000422887 DOCK2Q92608 1830 aa12.33□□□□□ -0.44
ECHDC3-203ENST00000422887 UFL1O94874 794 aa12.33□□□□□ -0.44
ECHDC3-203ENST00000422887 KCNJ4P48050 445 aa12.33□□□□□ -0.44
ECHDC3-203ENST00000422887 GPSM2P81274 684 aa12.33□□□□□ -0.44
ECHDC3-203ENST00000422887 UBE4AQ14139 1066 aa12.33□□□□□ -0.44
ECHDC3-203ENST00000422887 PUM3Q15397 648 aaKnown RBP12.33□□□□□ -0.44
ECHDC3-203ENST00000422887 VGLL2Q8N8G2 317 aa12.33□□□□□ -0.44
ECHDC3-203ENST00000422887 TBC1D16Q8TBP0 767 aa12.33□□□□□ -0.44
ECHDC3-203ENST00000422887 GCC1Q96CN9 775 aa12.33□□□□□ -0.44
ECHDC3-203ENST00000422887 PUS3Q9BZE2 481 aaKnown RBP12.33□□□□□ -0.44
ECHDC3-203ENST00000422887 RWDD1Q9H446 243 aaPredicted RBP12.33□□□□□ -0.44
ECHDC3-203ENST00000422887 AKAP2Q9Y2D5 859 aa12.33□□□□□ -0.44
ECHDC3-203ENST00000422887 ZNF804BA4D1E1 1349 aa12.33□□□□□ -0.44
ECHDC3-203ENST00000422887 ADAMTSL1Q8N6G6 1762 aa12.33□□□□□ -0.44
ECHDC3-203ENST00000422887 ZNF609O15014 1411 aa12.32□□□□□ -0.44
ECHDC3-203ENST00000422887 ARHGAP27Q6ZUM4 889 aa12.32□□□□□ -0.44
ECHDC3-203ENST00000422887 C15orf52Q6ZUT6 534 aaKnown RBP12.32□□□□□ -0.44
ECHDC3-203ENST00000422887 KIF1BPQ96EK5 621 aa12.32□□□□□ -0.44
ECHDC3-203ENST00000422887 DCTPP1Q9H773 170 aa12.32□□□□□ -0.44
ECHDC3-203ENST00000422887 GPR108Q9NPR9 543 aa12.32□□□□□ -0.44
ECHDC3-203ENST00000422887 MYH7P12883 1935 aa12.32□□□□□ -0.44
ECHDC3-203ENST00000422887 C6orf229H3BNL8 230 aa12.31□□□□□ -0.44
ECHDC3-203ENST00000422887 IFIT1P09914 478 aaKnown RBP12.31□□□□□ -0.44
ECHDC3-203ENST00000422887 LMNB1P20700 586 aa12.31□□□□□ -0.44
ECHDC3-203ENST00000422887 KIAA2012Q0VF49 1180 aa12.31□□□□□ -0.44
ECHDC3-203ENST00000422887 LPIN2Q92539 896 aa12.31□□□□□ -0.44
ECHDC3-203ENST00000422887 EXOC6BQ9Y2D4 811 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms