RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 PELP1Q8IZL8 1130 aaKnown RBP21.78■■□□□ 1.08
LINC00271-201ENST00000421378 PUS3Q9BZE2 481 aaKnown RBP21.78■■□□□ 1.08
LINC00271-201ENST00000421378 EYA2O00167 538 aa21.77■■□□□ 1.08
LINC00271-201ENST00000421378 LRRC24Q50LG9 513 aa21.77■■□□□ 1.08
LINC00271-201ENST00000421378 CC2D2BQ6DHV5 1058 aa21.77■■□□□ 1.08
LINC00271-201ENST00000421378 MINPP1Q9UNW1 487 aa21.77■■□□□ 1.08
LINC00271-201ENST00000421378 SURF6O75683 361 aaKnown RBP21.76■■□□□ 1.07
LINC00271-201ENST00000421378 CIAO1O76071 339 aa21.76■■□□□ 1.07
LINC00271-201ENST00000421378 CCDC93Q567U6 631 aa21.76■■□□□ 1.07
LINC00271-201ENST00000421378 RIPOR2Q9Y4F9 1068 aa21.76■■□□□ 1.07
LINC00271-201ENST00000421378 MROH5Q6ZUA9 1318 aa21.75■■□□□ 1.07
LINC00271-201ENST00000421378 YBX3P16989 372 aaKnown RBP eCLIP21.74■■□□□ 1.07
LINC00271-201ENST00000421378 IL15P40933 162 aaPredicted RBP21.74■■□□□ 1.07
LINC00271-201ENST00000421378 CHRNDQ07001 517 aa21.74■■□□□ 1.07
LINC00271-201ENST00000421378 G3BP1Q13283 466 aaKnown RBP eCLIP21.74■■□□□ 1.07
LINC00271-201ENST00000421378 ATG9AQ7Z3C6 839 aa21.74■■□□□ 1.07
LINC00271-201ENST00000421378 ANKIB1Q9P2G1 1089 aa21.74■■□□□ 1.07
LINC00271-201ENST00000421378 NOP58Q9Y2X3 529 aaKnown RBP21.74■■□□□ 1.07
LINC00271-201ENST00000421378 SNED1Q8TER0 1413 aa21.74■■□□□ 1.07
LINC00271-201ENST00000421378 A0A1B0GUL6 1792 aa21.74■■□□□ 1.07
LINC00271-201ENST00000421378 OS9Q13438 667 aaPredicted RBP21.74■■□□□ 1.07
LINC00271-201ENST00000421378 HDAC1Q13547 482 aaPredicted RBP21.74■■□□□ 1.07
LINC00271-201ENST00000421378 GPR162Q16538 588 aa21.74■■□□□ 1.07
LINC00271-201ENST00000421378 GRIPAP1Q4V328 841 aa21.74■■□□□ 1.07
LINC00271-201ENST00000421378 ANKRD2Q9GZV1 360 aa21.74■■□□□ 1.07
LINC00271-201ENST00000421378 NSFL1CQ9UNZ2 370 aaKnown RBP21.74■■□□□ 1.07
LINC00271-201ENST00000421378 EXOC6BQ9Y2D4 811 aa21.74■■□□□ 1.07
LINC00271-201ENST00000421378 XDHP47989 1333 aa21.73■■□□□ 1.07
LINC00271-201ENST00000421378 METTL24Q5JXM2 366 aa21.73■■□□□ 1.07
LINC00271-201ENST00000421378 RTKN2Q8IZC4 609 aa21.73■■□□□ 1.07
LINC00271-201ENST00000421378 LTBP1Q14766 1721 aa21.73■■□□□ 1.07
LINC00271-201ENST00000421378 GPSM2P81274 684 aa21.72■■□□□ 1.07
LINC00271-201ENST00000421378 HSP90AB4PQ58FF6 505 aa21.72■■□□□ 1.07
LINC00271-201ENST00000421378 DPP8Q6V1X1 898 aaPredicted RBP21.72■■□□□ 1.07
LINC00271-201ENST00000421378 MPNDQ8N594 471 aa21.72■■□□□ 1.07
LINC00271-201ENST00000421378 HELBQ8NG08 1087 aaPredicted RBP21.71■■□□□ 1.07
LINC00271-201ENST00000421378 RWDD1Q9H446 243 aaPredicted RBP21.71■■□□□ 1.07
LINC00271-201ENST00000421378 PODXL2Q9NZ53 605 aa21.71■■□□□ 1.07
LINC00271-201ENST00000421378 FER1L6Q2WGJ9 1857 aa21.71■■□□□ 1.07
LINC00271-201ENST00000421378 DUOX1Q9NRD9 1551 aa21.7■■□□□ 1.07
LINC00271-201ENST00000421378 TAF5LO75529 589 aa21.7■■□□□ 1.06
LINC00271-201ENST00000421378 ERICH6BQ5W0A0 696 aa21.7■■□□□ 1.06
LINC00271-201ENST00000421378 ERC1Q8IUD2 1116 aa21.7■■□□□ 1.06
LINC00271-201ENST00000421378 VGLL2Q8N8G2 317 aa21.7■■□□□ 1.06
LINC00271-201ENST00000421378 DCTPP1Q9H773 170 aa21.7■■□□□ 1.06
LINC00271-201ENST00000421378 CEP126Q9P2H0 1117 aa21.7■■□□□ 1.06
LINC00271-201ENST00000421378 UFL1O94874 794 aa21.69■■□□□ 1.06
LINC00271-201ENST00000421378 PDE8BO95263 885 aa21.69■■□□□ 1.06
LINC00271-201ENST00000421378 TAOK3Q9H2K8 898 aa21.69■■□□□ 1.06
LINC00271-201ENST00000421378 GGA1Q9UJY5 639 aa21.69■■□□□ 1.06
LINC00271-201ENST00000421378 SASH1O94885 1247 aa21.68■■□□□ 1.06
LINC00271-201ENST00000421378 KCNJ4P48050 445 aa21.68■■□□□ 1.06
LINC00271-201ENST00000421378 PSMD1Q99460 953 aa21.68■■□□□ 1.06
LINC00271-201ENST00000421378 APBB1O00213 710 aa21.67■■□□□ 1.06
LINC00271-201ENST00000421378 NFKBIEO00221 500 aa21.67■■□□□ 1.06
LINC00271-201ENST00000421378 GRIN3BO60391 1043 aa21.67■■□□□ 1.06
LINC00271-201ENST00000421378 RAB11FIP3O75154 756 aa21.67■■□□□ 1.06
LINC00271-201ENST00000421378 IGHDP01880 384 aa21.67■■□□□ 1.06
LINC00271-201ENST00000421378 ATP2B4P23634 1241 aa21.67■■□□□ 1.06
LINC00271-201ENST00000421378 FKBP4Q02790 459 aaKnown RBP eCLIP21.67■■□□□ 1.06
LINC00271-201ENST00000421378 TFCP2Q12800 502 aa21.67■■□□□ 1.06
LINC00271-201ENST00000421378 ARHGAP27Q6ZUM4 889 aa21.67■■□□□ 1.06
LINC00271-201ENST00000421378 TBC1D16Q8TBP0 767 aa21.67■■□□□ 1.06
LINC00271-201ENST00000421378 RTFDC1Q9BY42 306 aaPredicted RBP21.67■■□□□ 1.06
LINC00271-201ENST00000421378 POLLQ9UGP5 575 aa21.67■■□□□ 1.06
LINC00271-201ENST00000421378 LEMD3Q9Y2U8 911 aa21.67■■□□□ 1.06
LINC00271-201ENST00000421378 ZNF804BA4D1E1 1349 aa21.66■■□□□ 1.06
LINC00271-201ENST00000421378 C6orf229H3BNL8 230 aa21.66■■□□□ 1.06
LINC00271-201ENST00000421378 PUM3Q15397 648 aaKnown RBP21.66■■□□□ 1.06
LINC00271-201ENST00000421378 SUPT20HQ8NEM7 779 aa21.66■■□□□ 1.06
LINC00271-201ENST00000421378 LTBP3Q9NS15 1303 aa21.66■■□□□ 1.06
LINC00271-201ENST00000421378 GCC1Q96CN9 775 aa21.65■■□□□ 1.06
LINC00271-201ENST00000421378 KIF1BPQ96EK5 621 aa21.65■■□□□ 1.06
LINC00271-201ENST00000421378 DCAF8L1A6NGE4 600 aa21.65■■□□□ 1.06
LINC00271-201ENST00000421378 SNAP23O00161 211 aa21.65■■□□□ 1.06
LINC00271-201ENST00000421378 UBE4AQ14139 1066 aa21.65■■□□□ 1.06
LINC00271-201ENST00000421378 RHPN1Q8TCX5 695 aa21.65■■□□□ 1.06
LINC00271-201ENST00000421378 WTIPA6NIX2 430 aaPredicted RBP21.64■■□□□ 1.05
LINC00271-201ENST00000421378 RASSF7Q02833 373 aa21.64■■□□□ 1.05
LINC00271-201ENST00000421378 LRRCC1Q9C099 1032 aa21.64■■□□□ 1.05
LINC00271-201ENST00000421378 AKAP2Q9Y2D5 859 aa21.64■■□□□ 1.05
LINC00271-201ENST00000421378 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.64■■□□□ 1.05
LINC00271-201ENST00000421378 ATP2B3Q16720 1220 aa21.63■■□□□ 1.05
LINC00271-201ENST00000421378 EYA3Q99504 573 aa21.63■■□□□ 1.05
LINC00271-201ENST00000421378 ZNF277Q9NRM2 450 aaPredicted RBP21.63■■□□□ 1.05
LINC00271-201ENST00000421378 ZNF609O15014 1411 aa21.63■■□□□ 1.05
LINC00271-201ENST00000421378 MED23Q9ULK4 1368 aa21.63■■□□□ 1.05
LINC00271-201ENST00000421378 WASHC4Q2M389 1173 aa21.62■■□□□ 1.05
LINC00271-201ENST00000421378 SMC5Q8IY18 1101 aa21.62■■□□□ 1.05
LINC00271-201ENST00000421378 LPIN2Q92539 896 aa21.62■■□□□ 1.05
LINC00271-201ENST00000421378 CCDC136Q96JN2 1154 aa21.62■■□□□ 1.05
LINC00271-201ENST00000421378 GPR101Q96P66 508 aaPredicted RBP21.62■■□□□ 1.05
LINC00271-201ENST00000421378 IL1RAPL2Q9NP60 686 aa21.62■■□□□ 1.05
LINC00271-201ENST00000421378 IFIT1P09914 478 aaKnown RBP21.61■■□□□ 1.05
LINC00271-201ENST00000421378 SLC5A1P13866 664 aa21.61■■□□□ 1.05
LINC00271-201ENST00000421378 FGFR2P21802 821 aa21.61■■□□□ 1.05
LINC00271-201ENST00000421378 GPR108Q9NPR9 543 aa21.61■■□□□ 1.05
LINC00271-201ENST00000421378 A0A1B0GUL7 405 aa21.61■■□□□ 1.05
LINC00271-201ENST00000421378 PPIP5K2O43314 1243 aa21.61■■□□□ 1.05
LINC00271-201ENST00000421378 KLRK1P26718 216 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms