RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 IGHMBP2P38935 993 aaKnown RBP15.67■□□□□ 0.1
SKA1-203ENST00000417656 GPSM2P81274 684 aa15.67■□□□□ 0.1
SKA1-203ENST00000417656 IFIT5Q13325 482 aaKnown RBP15.67■□□□□ 0.1
SKA1-203ENST00000417656 GRIPAP1Q4V328 841 aa15.67■□□□□ 0.1
SKA1-203ENST00000417656 DPP8Q6V1X1 898 aaPredicted RBP15.67■□□□□ 0.1
SKA1-203ENST00000417656 ITPRIPQ8IWB1 547 aa15.67■□□□□ 0.1
SKA1-203ENST00000417656 MPNDQ8N594 471 aa15.67■□□□□ 0.1
SKA1-203ENST00000417656 LRRFIP2Q9Y608 721 aaKnown RBP15.67■□□□□ 0.1
SKA1-203ENST00000417656 IARSP41252 1262 aaKnown RBP15.66■□□□□ 0.1
SKA1-203ENST00000417656 ZNF594Q96JF6 807 aaPredicted RBP15.66■□□□□ 0.1
SKA1-203ENST00000417656 GNAI3P08754 354 aa15.65■□□□□ 0.1
SKA1-203ENST00000417656 CCDC57Q2TAC2 916 aa15.65■□□□□ 0.1
SKA1-203ENST00000417656 TAF7LQ5H9L4 462 aa15.65■□□□□ 0.1
SKA1-203ENST00000417656 RTFDC1Q9BY42 306 aaPredicted RBP15.65■□□□□ 0.1
SKA1-203ENST00000417656 BSDC1Q9NW68 430 aaPredicted RBP15.65■□□□□ 0.1
SKA1-203ENST00000417656 NSFL1CQ9UNZ2 370 aaKnown RBP15.65■□□□□ 0.1
SKA1-203ENST00000417656 MPHOSPH8Q99549 860 aa15.64■□□□□ 0.09
SKA1-203ENST00000417656 PPIP5K2O43314 1243 aa15.63■□□□□ 0.09
SKA1-203ENST00000417656 UFL1O94874 794 aa15.63■□□□□ 0.09
SKA1-203ENST00000417656 MS4A1P11836 297 aa15.63■□□□□ 0.09
SKA1-203ENST00000417656 AOC3Q16853 763 aa15.63■□□□□ 0.09
SKA1-203ENST00000417656 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.63■□□□□ 0.09
SKA1-203ENST00000417656 SUPT20HQ8NEM7 779 aa15.63■□□□□ 0.09
SKA1-203ENST00000417656 GPR101Q96P66 508 aaPredicted RBP15.63■□□□□ 0.09
SKA1-203ENST00000417656 ANKIB1Q9P2G1 1089 aa15.63■□□□□ 0.09
SKA1-203ENST00000417656 MINPP1Q9UNW1 487 aa15.63■□□□□ 0.09
SKA1-203ENST00000417656 XDHP47989 1333 aa15.63■□□□□ 0.09
SKA1-203ENST00000417656 ZC3H4Q9UPT8 1303 aaKnown RBP15.63■□□□□ 0.09
SKA1-203ENST00000417656 C6orf229H3BNL8 230 aa15.62■□□□□ 0.09
SKA1-203ENST00000417656 C20orf194Q5TEA3 1177 aa15.62■□□□□ 0.09
SKA1-203ENST00000417656 LARGE2Q8N3Y3 721 aa15.62■□□□□ 0.09
SKA1-203ENST00000417656 TBC1D16Q8TBP0 767 aa15.62■□□□□ 0.09
SKA1-203ENST00000417656 ZNF526Q8TF50 670 aaPredicted RBP15.62■□□□□ 0.09
SKA1-203ENST00000417656 PODXL2Q9NZ53 605 aa15.62■□□□□ 0.09
SKA1-203ENST00000417656 POLLQ9UGP5 575 aa15.62■□□□□ 0.09
SKA1-203ENST00000417656 GGA1Q9UJY5 639 aa15.62■□□□□ 0.09
SKA1-203ENST00000417656 HDAC5Q9UQL6 1122 aa15.62■□□□□ 0.09
SKA1-203ENST00000417656 GNAI2P04899 355 aa15.61■□□□□ 0.09
SKA1-203ENST00000417656 RFX5P48382 616 aaPredicted RBP15.61■□□□□ 0.09
SKA1-203ENST00000417656 CHRNDQ07001 517 aa15.61■□□□□ 0.09
SKA1-203ENST00000417656 MVPQ14764 893 aaKnown RBP15.61■□□□□ 0.09
SKA1-203ENST00000417656 ZNF784Q8NCA9 323 aaPredicted RBP15.61■□□□□ 0.09
SKA1-203ENST00000417656 KLHDC4Q8TBB5 520 aa15.61■□□□□ 0.09
SKA1-203ENST00000417656 C1orf115Q9H7X2 142 aa15.61■□□□□ 0.09
SKA1-203ENST00000417656 COG6Q9Y2V7 657 aa15.61■□□□□ 0.09
SKA1-203ENST00000417656 RRP1P56182 461 aaKnown RBP15.6■□□□□ 0.09
SKA1-203ENST00000417656 KIAA2012Q0VF49 1180 aa15.6■□□□□ 0.09
SKA1-203ENST00000417656 LDHAL6AQ6ZMR3 332 aa15.6■□□□□ 0.09
SKA1-203ENST00000417656 NIM1KQ8IY84 436 aa15.6■□□□□ 0.09
SKA1-203ENST00000417656 PUS3Q9BZE2 481 aaKnown RBP15.6■□□□□ 0.09
SKA1-203ENST00000417656 CNNM1Q9NRU3 951 aa15.6■□□□□ 0.09
SKA1-203ENST00000417656 ZNF541Q9H0D2 1346 aa15.6■□□□□ 0.09
SKA1-203ENST00000417656 WTIPA6NIX2 430 aaPredicted RBP15.59■□□□□ 0.09
SKA1-203ENST00000417656 RIMBP2O15034 1052 aa15.59■□□□□ 0.09
SKA1-203ENST00000417656 ZBTB7BO15156 539 aaPredicted RBP15.59■□□□□ 0.09
SKA1-203ENST00000417656 ATP2B4P23634 1241 aa15.59■□□□□ 0.09
SKA1-203ENST00000417656 HELBQ8NG08 1087 aaPredicted RBP15.59■□□□□ 0.09
SKA1-203ENST00000417656 JDP2Q8WYK2 163 aa15.59■□□□□ 0.09
SKA1-203ENST00000417656 EYA3Q99504 573 aa15.59■□□□□ 0.09
SKA1-203ENST00000417656 WDR90Q96KV7 1748 aa15.58■□□□□ 0.08
SKA1-203ENST00000417656 MTX1Q13505 466 aa15.58■□□□□ 0.08
SKA1-203ENST00000417656 POLA2Q14181 598 aa15.58■□□□□ 0.08
SKA1-203ENST00000417656 PDE3AQ14432 1141 aa15.58■□□□□ 0.08
SKA1-203ENST00000417656 WASHC4Q2M389 1173 aa15.58■□□□□ 0.08
SKA1-203ENST00000417656 LRRC24Q50LG9 513 aa15.58■□□□□ 0.08
SKA1-203ENST00000417656 ANKRD2Q9GZV1 360 aa15.58■□□□□ 0.08
SKA1-203ENST00000417656 VPS33BQ9H267 617 aa15.58■□□□□ 0.08
SKA1-203ENST00000417656 MED23Q9ULK4 1368 aa15.58■□□□□ 0.08
SKA1-203ENST00000417656 SCN9AQ15858 1988 aa15.57■□□□□ 0.08
SKA1-203ENST00000417656 SRGAP3O43295 1099 aa15.57■□□□□ 0.08
SKA1-203ENST00000417656 TAF5LO75529 589 aa15.57■□□□□ 0.08
SKA1-203ENST00000417656 KCNJ4P48050 445 aa15.57■□□□□ 0.08
SKA1-203ENST00000417656 PTPN12Q05209 780 aaKnown RBP15.57■□□□□ 0.08
SKA1-203ENST00000417656 SIL1Q9H173 461 aa15.57■□□□□ 0.08
SKA1-203ENST00000417656 DBNDD1Q9H9R9 158 aa15.57■□□□□ 0.08
SKA1-203ENST00000417656 DDX19BQ9UMR2 479 aa15.57■□□□□ 0.08
SKA1-203ENST00000417656 PA2G4Q9UQ80 394 aaKnown RBP15.57■□□□□ 0.08
SKA1-203ENST00000417656 PSME4Q14997 1843 aa15.57■□□□□ 0.08
SKA1-203ENST00000417656 PNMA6EA0A0J9YXQ4 647 aa15.56■□□□□ 0.08
SKA1-203ENST00000417656 FZD9O00144 591 aa15.56■□□□□ 0.08
SKA1-203ENST00000417656 SNAP23O00161 211 aa15.56■□□□□ 0.08
SKA1-203ENST00000417656 KLRK1P26718 216 aa15.56■□□□□ 0.08
SKA1-203ENST00000417656 RIPOR2Q9Y4F9 1068 aa15.56■□□□□ 0.08
SKA1-203ENST00000417656 ZNF804BA4D1E1 1349 aa15.56■□□□□ 0.08
SKA1-203ENST00000417656 KDM2BQ8NHM5 1336 aa15.56■□□□□ 0.08
SKA1-203ENST00000417656 ZNF646O15015 1829 aaPredicted RBP15.55■□□□□ 0.08
SKA1-203ENST00000417656 MROH5Q6ZUA9 1318 aa15.55■□□□□ 0.08
SKA1-203ENST00000417656 GLTPD2A6NH11 291 aa15.55■□□□□ 0.08
SKA1-203ENST00000417656 EYA2O00167 538 aa15.55■□□□□ 0.08
SKA1-203ENST00000417656 ECE2O60344 883 aa15.55■□□□□ 0.08
SKA1-203ENST00000417656 DOK7Q18PE1 504 aa15.55■□□□□ 0.08
SKA1-203ENST00000417656 METTL24Q5JXM2 366 aa15.55■□□□□ 0.08
SKA1-203ENST00000417656 ZC3H12CQ9C0D7 883 aaKnown RBP15.55■□□□□ 0.08
SKA1-203ENST00000417656 GPBP1L1Q9HC44 474 aaPredicted RBP15.55■□□□□ 0.08
SKA1-203ENST00000417656 NMRK2Q9NPI5 230 aa15.55■□□□□ 0.08
SKA1-203ENST00000417656 ZNRF3Q9ULT6 936 aa15.55■□□□□ 0.08
SKA1-203ENST00000417656 LEMD3Q9Y2U8 911 aa15.55■□□□□ 0.08
SKA1-203ENST00000417656 YDJCA8MPS7 323 aa15.54■□□□□ 0.08
SKA1-203ENST00000417656 DDNO94850 711 aaPredicted RBP15.54■□□□□ 0.08
SKA1-203ENST00000417656 EIF6P56537 245 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms