RNA–Protein interactions for RNA: ENST00000413167.2

SPECC1-207, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 3

Gene SPECC1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-207ENST00000413167 PRAMEF18Q5VWM3 479 aa19.43■□□□□ 0.7
SPECC1-207ENST00000413167 CCDC102AQ96A19 550 aa19.43■□□□□ 0.7
SPECC1-207ENST00000413167 HPS5Q9UPZ3 1129 aa19.43■□□□□ 0.7
SPECC1-207ENST00000413167 SPEF2Q9C093 1822 aa19.43■□□□□ 0.7
SPECC1-207ENST00000413167 WTIPA6NIX2 430 aaPredicted RBP19.42■□□□□ 0.7
SPECC1-207ENST00000413167 TBC1D8O95759 1140 aa19.42■□□□□ 0.7
SPECC1-207ENST00000413167 ANGEL2Q5VTE6 544 aaKnown RBP19.42■□□□□ 0.7
SPECC1-207ENST00000413167 CTU1Q7Z7A3 348 aaKnown RBP19.42■□□□□ 0.7
SPECC1-207ENST00000413167 TBC1D16Q8TBP0 767 aa19.42■□□□□ 0.7
SPECC1-207ENST00000413167 CHPF2Q9P2E5 772 aa19.42■□□□□ 0.7
SPECC1-207ENST00000413167 SEC31BQ9NQW1 1179 aa19.41■□□□□ 0.7
SPECC1-207ENST00000413167 PAPPA2Q9BXP8 1791 aa19.4■□□□□ 0.7
SPECC1-207ENST00000413167 NEFMP07197 916 aa19.4■□□□□ 0.7
SPECC1-207ENST00000413167 RIPK4P57078 832 aa19.4■□□□□ 0.7
SPECC1-207ENST00000413167 PRPF38BQ5VTL8 546 aaKnown RBP19.4■□□□□ 0.7
SPECC1-207ENST00000413167 JARID2Q92833 1246 aaPredicted RBP19.4■□□□□ 0.7
SPECC1-207ENST00000413167 VIL1P09327 827 aaKnown RBP19.39■□□□□ 0.69
SPECC1-207ENST00000413167 MKRN3Q13064 507 aaKnown RBP19.39■□□□□ 0.69
SPECC1-207ENST00000413167 SCARF1Q14162 830 aa19.39■□□□□ 0.69
SPECC1-207ENST00000413167 SF3B3Q15393 1217 aaKnown RBP19.39■□□□□ 0.69
SPECC1-207ENST00000413167 HSP90AB3PQ58FF7 597 aa19.39■□□□□ 0.69
SPECC1-207ENST00000413167 SULF1Q8IWU6 871 aa19.39■□□□□ 0.69
SPECC1-207ENST00000413167 ISCA1Q9BUE6 129 aa19.39■□□□□ 0.69
SPECC1-207ENST00000413167 R3HDMLQ9H3Y0 253 aa19.39■□□□□ 0.69
SPECC1-207ENST00000413167 UBE2Q2LH0YL09 131 aa19.38■□□□□ 0.69
SPECC1-207ENST00000413167 RPS12P25398 132 aaKnown RBP19.38■□□□□ 0.69
SPECC1-207ENST00000413167 ZNF296Q8WUU4 475 aaPredicted RBP19.38■□□□□ 0.69
SPECC1-207ENST00000413167 MAPK8IP3Q9UPT6 1336 aa19.38■□□□□ 0.69
SPECC1-207ENST00000413167 CCDC85AQ96PX6 553 aaPredicted RBP19.37■□□□□ 0.69
SPECC1-207ENST00000413167 MXD3Q9BW11 206 aa19.37■□□□□ 0.69
SPECC1-207ENST00000413167 UFL1O94874 794 aa19.35■□□□□ 0.69
SPECC1-207ENST00000413167 ZNF280AP59817 542 aaPredicted RBP19.35■□□□□ 0.69
SPECC1-207ENST00000413167 TMC4Q7Z404 712 aa19.35■□□□□ 0.69
SPECC1-207ENST00000413167 LAS1LQ9Y4W2 734 aaKnown RBP19.35■□□□□ 0.69
SPECC1-207ENST00000413167 IRS4O14654 1257 aaPredicted RBP19.34■□□□□ 0.69
SPECC1-207ENST00000413167 TMPOP42166 694 aaKnown RBP19.34■□□□□ 0.69
SPECC1-207ENST00000413167 RPS8P62241 208 aaKnown RBP19.34■□□□□ 0.69
SPECC1-207ENST00000413167 NEUROD2Q15784 382 aa19.34■□□□□ 0.69
SPECC1-207ENST00000413167 CCDC146Q8IYE0 955 aa19.34■□□□□ 0.69
SPECC1-207ENST00000413167 PLBD2Q8NHP8 589 aa19.34■□□□□ 0.69
SPECC1-207ENST00000413167 GMLQ99445 158 aa19.34■□□□□ 0.69
SPECC1-207ENST00000413167 NBPF9Q3BBW0 867 aa19.33■□□□□ 0.68
SPECC1-207ENST00000413167 RSBN1LQ6PCB5 846 aaPredicted RBP19.33■□□□□ 0.68
SPECC1-207ENST00000413167 ANKRD13DQ6ZTN6 518 aa19.33■□□□□ 0.68
SPECC1-207ENST00000413167 EYA3Q99504 573 aa19.33■□□□□ 0.68
SPECC1-207ENST00000413167 ZC3H12CQ9C0D7 883 aaKnown RBP19.33■□□□□ 0.68
SPECC1-207ENST00000413167 FZD1Q9UP38 647 aa19.33■□□□□ 0.68
SPECC1-207ENST00000413167 HDAC9Q9UKV0 1011 aa19.32■□□□□ 0.68
SPECC1-207ENST00000413167 MYOZ2Q9NPC6 264 aa19.31■□□□□ 0.68
SPECC1-207ENST00000413167 ANKIB1Q9P2G1 1089 aa19.31■□□□□ 0.68
SPECC1-207ENST00000413167 MKI67P46013 3256 aaKnown RBP19.3■□□□□ 0.68
SPECC1-207ENST00000413167 CHL1O00533 1208 aa19.3■□□□□ 0.68
SPECC1-207ENST00000413167 PRKG1Q13976 671 aa19.3■□□□□ 0.68
SPECC1-207ENST00000413167 HDGFL1Q5TGJ6 251 aa19.3■□□□□ 0.68
SPECC1-207ENST00000413167 PODXL2Q9NZ53 605 aa19.3■□□□□ 0.68
SPECC1-207ENST00000413167 TRIM35Q9UPQ4 493 aa19.3■□□□□ 0.68
SPECC1-207ENST00000413167 G3V3G9 751 aa19.29■□□□□ 0.68
SPECC1-207ENST00000413167 GPR25O00155 361 aa19.29■□□□□ 0.68
SPECC1-207ENST00000413167 DCAF8Q5TAQ9 597 aa19.29■□□□□ 0.68
SPECC1-207ENST00000413167 PHAXQ9H814 394 aaKnown RBP19.29■□□□□ 0.68
SPECC1-207ENST00000413167 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.29■□□□□ 0.68
SPECC1-207ENST00000413167 GGA1Q9UJY5 639 aa19.29■□□□□ 0.68
SPECC1-207ENST00000413167 USP17L8P0C7I0 530 aa19.28■□□□□ 0.68
SPECC1-207ENST00000413167 AGBL3Q8NEM8 1001 aa19.28■□□□□ 0.68
SPECC1-207ENST00000413167 ZNF609O15014 1411 aa19.27■□□□□ 0.68
SPECC1-207ENST00000413167 POTEFA5A3E0 1075 aa19.27■□□□□ 0.68
SPECC1-207ENST00000413167 TTLL12Q14166 644 aaPredicted RBP19.27■□□□□ 0.68
SPECC1-207ENST00000413167 BABAM1Q9NWV8 329 aa19.27■□□□□ 0.68
SPECC1-207ENST00000413167 HTTP42858 3142 aa19.27■□□□□ 0.67
SPECC1-207ENST00000413167 MYH3P11055 1940 aa19.26■□□□□ 0.67
SPECC1-207ENST00000413167 SASH1O94885 1247 aa19.26■□□□□ 0.67
SPECC1-207ENST00000413167 PTPN12Q05209 780 aaKnown RBP19.26■□□□□ 0.67
SPECC1-207ENST00000413167 TM4SF4P48230 202 aa19.25■□□□□ 0.67
SPECC1-207ENST00000413167 MYD88Q99836 296 aa19.25■□□□□ 0.67
SPECC1-207ENST00000413167 CENPFP49454 3210 aa19.25■□□□□ 0.67
SPECC1-207ENST00000413167 FKBP1BP68106 108 aa19.24■□□□□ 0.67
SPECC1-207ENST00000413167 CAP1Q01518 475 aa19.24■□□□□ 0.67
SPECC1-207ENST00000413167 DUSP27Q5VZP5 1158 aa19.24■□□□□ 0.67
SPECC1-207ENST00000413167 FBXO46Q6PJ61 603 aaPredicted RBP19.24■□□□□ 0.67
SPECC1-207ENST00000413167 TXNRD3Q86VQ6 643 aa19.24■□□□□ 0.67
SPECC1-207ENST00000413167 ZBTB38Q8NAP3 1195 aaPredicted RBP19.24■□□□□ 0.67
SPECC1-207ENST00000413167 PITPNM2Q9BZ72 1349 aa19.24■□□□□ 0.67
SPECC1-207ENST00000413167 USP17L3A6NCW0 530 aa19.23■□□□□ 0.67
SPECC1-207ENST00000413167 USP17L4A6NCW7 530 aa19.23■□□□□ 0.67
SPECC1-207ENST00000413167 WNT10BO00744 389 aa19.23■□□□□ 0.67
SPECC1-207ENST00000413167 KLRK1P26718 216 aa19.23■□□□□ 0.67
SPECC1-207ENST00000413167 TRIM28Q13263 835 aaKnown RBP19.23■□□□□ 0.67
SPECC1-207ENST00000413167 PKN2Q16513 984 aaKnown RBP19.23■□□□□ 0.67
SPECC1-207ENST00000413167 USP17L1Q7RTZ2 530 aa19.23■□□□□ 0.67
SPECC1-207ENST00000413167 FBXW7Q969H0 707 aa19.23■□□□□ 0.67
SPECC1-207ENST00000413167 PNNQ9H307 717 aaKnown RBP19.23■□□□□ 0.67
SPECC1-207ENST00000413167 DBF4Q9UBU7 674 aaPredicted RBP19.23■□□□□ 0.67
SPECC1-207ENST00000413167 ELL2O00472 640 aaPredicted RBP19.22■□□□□ 0.67
SPECC1-207ENST00000413167 DACT2Q5SW24 774 aa19.22■□□□□ 0.67
SPECC1-207ENST00000413167 RIC3Q7Z5B4 369 aa19.22■□□□□ 0.67
SPECC1-207ENST00000413167 REM2Q8IYK8 340 aaPredicted RBP19.22■□□□□ 0.67
SPECC1-207ENST00000413167 PCDHAC2Q9Y5I4 1007 aa19.22■□□□□ 0.67
SPECC1-207ENST00000413167 RBBP6Q7Z6E9 1792 aaKnown RBP19.21■□□□□ 0.67
SPECC1-207ENST00000413167 FKTNO75072 461 aa19.21■□□□□ 0.67
SPECC1-207ENST00000413167 HABP4Q5JVS0 413 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms