RNA–Protein interactions for RNA: ENST00000412827.6

PUDP-202, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 1,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-202ENST00000412827 COPRSQ9NQ92 184 aa18.61■□□□□ 0.57
PUDP-202ENST00000412827 RPS8P62241 208 aaKnown RBP18.6■□□□□ 0.57
PUDP-202ENST00000412827 GRIPAP1Q4V328 841 aa18.6■□□□□ 0.57
PUDP-202ENST00000412827 EXOC6BQ9Y2D4 811 aa18.6■□□□□ 0.57
PUDP-202ENST00000412827 KCNA3P22001 575 aa18.59■□□□□ 0.57
PUDP-202ENST00000412827 PLEKHM2Q8IWE5 1019 aa18.59■□□□□ 0.57
PUDP-202ENST00000412827 SEC31BQ9NQW1 1179 aa18.59■□□□□ 0.57
PUDP-202ENST00000412827 FBXO3Q9UK99 471 aa18.59■□□□□ 0.57
PUDP-202ENST00000412827 BCS1LQ9Y276 419 aa18.59■□□□□ 0.57
PUDP-202ENST00000412827 BRCA1P38398 1863 aaKnown RBP18.59■□□□□ 0.57
PUDP-202ENST00000412827 AOX1Q06278 1338 aa18.59■□□□□ 0.57
PUDP-202ENST00000412827 DCAF8L1A6NGE4 600 aa18.58■□□□□ 0.57
PUDP-202ENST00000412827 G3BP1Q13283 466 aaKnown RBP eCLIP18.58■□□□□ 0.57
PUDP-202ENST00000412827 RHPN1Q8TCX5 695 aa18.58■□□□□ 0.57
PUDP-202ENST00000412827 CELF1Q92879 486 aaKnown RBP18.58■□□□□ 0.57
PUDP-202ENST00000412827 CNNM1Q9NRU3 951 aa18.57■□□□□ 0.56
PUDP-202ENST00000412827 BSDC1Q9NW68 430 aaPredicted RBP18.57■□□□□ 0.56
PUDP-202ENST00000412827 RFX5P48382 616 aaPredicted RBP18.56■□□□□ 0.56
PUDP-202ENST00000412827 C8orf34Q49A92 452 aa18.56■□□□□ 0.56
PUDP-202ENST00000412827 CCDC93Q567U6 631 aa18.56■□□□□ 0.56
PUDP-202ENST00000412827 LDHAL6AQ6ZMR3 332 aa18.56■□□□□ 0.56
PUDP-202ENST00000412827 STAP2Q9UGK3 403 aa18.56■□□□□ 0.56
PUDP-202ENST00000412827 ATP6V0A2Q9Y487 856 aa18.56■□□□□ 0.56
PUDP-202ENST00000412827 RBM19Q9Y4C8 960 aaKnown RBP18.56■□□□□ 0.56
PUDP-202ENST00000412827 OS9Q13438 667 aaPredicted RBP18.55■□□□□ 0.56
PUDP-202ENST00000412827 SP8Q8IXZ3 490 aa18.55■□□□□ 0.56
PUDP-202ENST00000412827 SALL3Q9BXA9 1300 aa18.55■□□□□ 0.56
PUDP-202ENST00000412827 LRRC37AA6NMS7 1700 aa18.55■□□□□ 0.56
PUDP-202ENST00000412827 CIAO1O76071 339 aa18.55■□□□□ 0.56
PUDP-202ENST00000412827 CLASRPQ8N2M8 674 aaKnown RBP18.55■□□□□ 0.56
PUDP-202ENST00000412827 ANKRD2Q9GZV1 360 aa18.55■□□□□ 0.56
PUDP-202ENST00000412827 CACNA1SQ13698 1873 aa18.54■□□□□ 0.56
PUDP-202ENST00000412827 MROH5Q6ZUA9 1318 aa18.54■□□□□ 0.56
PUDP-202ENST00000412827 ARFGEF1Q9Y6D6 1849 aa18.54■□□□□ 0.56
PUDP-202ENST00000412827 EYA2O00167 538 aa18.54■□□□□ 0.56
PUDP-202ENST00000412827 SMARCA5O60264 1052 aaPredicted RBP18.54■□□□□ 0.56
PUDP-202ENST00000412827 PTPN12Q05209 780 aaKnown RBP18.54■□□□□ 0.56
PUDP-202ENST00000412827 TTC22Q5TAA0 569 aa18.54■□□□□ 0.56
PUDP-202ENST00000412827 RTKN2Q8IZC4 609 aa18.54■□□□□ 0.56
PUDP-202ENST00000412827 C21orf2O43822 256 aa18.53■□□□□ 0.56
PUDP-202ENST00000412827 GRIN3BO60391 1043 aa18.53■□□□□ 0.56
PUDP-202ENST00000412827 IL15P40933 162 aaPredicted RBP18.53■□□□□ 0.56
PUDP-202ENST00000412827 PDE1AP54750 535 aa18.53■□□□□ 0.56
PUDP-202ENST00000412827 GPR162Q16538 588 aa18.53■□□□□ 0.56
PUDP-202ENST00000412827 ZNF594Q96JF6 807 aaPredicted RBP18.53■□□□□ 0.56
PUDP-202ENST00000412827 WWC3Q9ULE0 1092 aa18.53■□□□□ 0.56
PUDP-202ENST00000412827 XDHP47989 1333 aa18.52■□□□□ 0.56
PUDP-202ENST00000412827 SLX4Q8IY92 1834 aa18.52■□□□□ 0.56
PUDP-202ENST00000412827 MX1P20591 662 aa18.52■□□□□ 0.55
PUDP-202ENST00000412827 SUPT20HQ8NEM7 779 aa18.52■□□□□ 0.55
PUDP-202ENST00000412827 ANKIB1Q9P2G1 1089 aa18.52■□□□□ 0.55
PUDP-202ENST00000412827 ZNF219Q9P2Y4 722 aaPredicted RBP18.52■□□□□ 0.55
PUDP-202ENST00000412827 TTC41PQ6P2S7 1318 aa18.51■□□□□ 0.55
PUDP-202ENST00000412827 APBB1O00213 710 aa18.51■□□□□ 0.55
PUDP-202ENST00000412827 METTL24Q5JXM2 366 aa18.51■□□□□ 0.55
PUDP-202ENST00000412827 DPP8Q6V1X1 898 aaPredicted RBP18.51■□□□□ 0.55
PUDP-202ENST00000412827 C16orf71Q8IYS4 520 aaPredicted RBP18.51■□□□□ 0.55
PUDP-202ENST00000412827 C7orf43Q8WVR3 580 aa18.51■□□□□ 0.55
PUDP-202ENST00000412827 SIL1Q9H173 461 aa18.51■□□□□ 0.55
PUDP-202ENST00000412827 GPR108Q9NPR9 543 aa18.51■□□□□ 0.55
PUDP-202ENST00000412827 SPEF2Q9C093 1822 aa18.51■□□□□ 0.55
PUDP-202ENST00000412827 KCNJ4P48050 445 aa18.5■□□□□ 0.55
PUDP-202ENST00000412827 MPNDQ8N594 471 aa18.5■□□□□ 0.55
PUDP-202ENST00000412827 KLHDC4Q8TBB5 520 aa18.5■□□□□ 0.55
PUDP-202ENST00000412827 GPATCH3Q96I76 525 aa18.5■□□□□ 0.55
PUDP-202ENST00000412827 MINPP1Q9UNW1 487 aa18.5■□□□□ 0.55
PUDP-202ENST00000412827 NSFL1CQ9UNZ2 370 aaKnown RBP18.5■□□□□ 0.55
PUDP-202ENST00000412827 PA2G4Q9UQ80 394 aaKnown RBP18.5■□□□□ 0.55
PUDP-202ENST00000412827 SASH1O94885 1247 aa18.49■□□□□ 0.55
PUDP-202ENST00000412827 CHRNDQ07001 517 aa18.49■□□□□ 0.55
PUDP-202ENST00000412827 TAOK3Q9H2K8 898 aa18.49■□□□□ 0.55
PUDP-202ENST00000412827 PODXL2Q9NZ53 605 aa18.49■□□□□ 0.55
PUDP-202ENST00000412827 GGA1Q9UJY5 639 aa18.49■□□□□ 0.55
PUDP-202ENST00000412827 COL4A1P02462 1669 aa18.49■□□□□ 0.55
PUDP-202ENST00000412827 ERC2O15083 957 aa18.48■□□□□ 0.55
PUDP-202ENST00000412827 ATP2B4P23634 1241 aa18.48■□□□□ 0.55
PUDP-202ENST00000412827 PSMD1Q99460 953 aa18.48■□□□□ 0.55
PUDP-202ENST00000412827 EYA3Q99504 573 aa18.48■□□□□ 0.55
PUDP-202ENST00000412827 IL1RAPL2Q9NP60 686 aa18.48■□□□□ 0.55
PUDP-202ENST00000412827 CEP126Q9P2H0 1117 aa18.48■□□□□ 0.55
PUDP-202ENST00000412827 LEMD3Q9Y2U8 911 aa18.48■□□□□ 0.55
PUDP-202ENST00000412827 LTBP3Q9NS15 1303 aa18.48■□□□□ 0.55
PUDP-202ENST00000412827 TAF1P21675 1872 aa18.48■□□□□ 0.55
PUDP-202ENST00000412827 UFL1O94874 794 aa18.47■□□□□ 0.55
PUDP-202ENST00000412827 IFIT2P09913 472 aaKnown RBP18.47■□□□□ 0.55
PUDP-202ENST00000412827 FKBP4Q02790 459 aaKnown RBP eCLIP18.47■□□□□ 0.55
PUDP-202ENST00000412827 UPF2Q9HAU5 1272 aaKnown RBP18.47■□□□□ 0.55
PUDP-202ENST00000412827 RIPOR2Q9Y4F9 1068 aa18.47■□□□□ 0.55
PUDP-202ENST00000412827 CDC45O75419 566 aa18.46■□□□□ 0.55
PUDP-202ENST00000412827 YBX3P16989 372 aaKnown RBP eCLIP18.46■□□□□ 0.555e-7■■□□□ 12.5
PUDP-202ENST00000412827 PUM3Q15397 648 aaKnown RBP18.46■□□□□ 0.55
PUDP-202ENST00000412827 LRRC24Q50LG9 513 aa18.46■□□□□ 0.55
PUDP-202ENST00000412827 OTUD7AQ8TE49 926 aaPredicted RBP18.46■□□□□ 0.55
PUDP-202ENST00000412827 PUS3Q9BZE2 481 aaKnown RBP18.46■□□□□ 0.55
PUDP-202ENST00000412827 AKAP2Q9Y2D5 859 aa18.46■□□□□ 0.55
PUDP-202ENST00000412827 SNED1Q8TER0 1413 aa18.46■□□□□ 0.55
PUDP-202ENST00000412827 C6orf229H3BNL8 230 aa18.45■□□□□ 0.54
PUDP-202ENST00000412827 GLRX3O76003 335 aaKnown RBP18.45■□□□□ 0.54
PUDP-202ENST00000412827 PDE8BO95263 885 aa18.45■□□□□ 0.54
PUDP-202ENST00000412827 GSPT1P15170 499 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms