RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 ZNF594Q96JF6 807 aaPredicted RBP16.55■□□□□ 0.24
HDAC8-210ENST00000412342 CHMP3Q9Y3E7 222 aa16.55■□□□□ 0.24
HDAC8-210ENST00000412342 LRRFIP2Q9Y608 721 aaKnown RBP16.55■□□□□ 0.24
HDAC8-210ENST00000412342 ZNF541Q9H0D2 1346 aa16.54■□□□□ 0.24
HDAC8-210ENST00000412342 WTIPA6NIX2 430 aaPredicted RBP16.54■□□□□ 0.24
HDAC8-210ENST00000412342 PPIP5K2O43314 1243 aa16.54■□□□□ 0.24
HDAC8-210ENST00000412342 RFX5P48382 616 aaPredicted RBP16.54■□□□□ 0.24
HDAC8-210ENST00000412342 CCDC57Q2TAC2 916 aa16.54■□□□□ 0.24
HDAC8-210ENST00000412342 ZNF646O15015 1829 aaPredicted RBP16.54■□□□□ 0.24
HDAC8-210ENST00000412342 SCN9AQ15858 1988 aa16.53■□□□□ 0.24
HDAC8-210ENST00000412342 GLTPD2A6NH11 291 aa16.53■□□□□ 0.24
HDAC8-210ENST00000412342 LARGE2Q8N3Y3 721 aa16.53■□□□□ 0.24
HDAC8-210ENST00000412342 PANK1Q8TE04 598 aa16.53■□□□□ 0.24
HDAC8-210ENST00000412342 ZNF526Q8TF50 670 aaPredicted RBP16.53■□□□□ 0.24
HDAC8-210ENST00000412342 GPR101Q96P66 508 aaPredicted RBP16.53■□□□□ 0.24
HDAC8-210ENST00000412342 PSME4Q14997 1843 aa16.53■□□□□ 0.24
HDAC8-210ENST00000412342 UFL1O94874 794 aa16.52■□□□□ 0.24
HDAC8-210ENST00000412342 GNAI3P08754 354 aa16.52■□□□□ 0.24
HDAC8-210ENST00000412342 CHRNDQ07001 517 aa16.52■□□□□ 0.24
HDAC8-210ENST00000412342 FTSJ3Q8IY81 847 aaKnown RBP16.52■□□□□ 0.24
HDAC8-210ENST00000412342 MPHOSPH8Q99549 860 aa16.52■□□□□ 0.24
HDAC8-210ENST00000412342 ANKIB1Q9P2G1 1089 aa16.52■□□□□ 0.24
HDAC8-210ENST00000412342 GGA1Q9UJY5 639 aa16.52■□□□□ 0.24
HDAC8-210ENST00000412342 IRS2Q9Y4H2 1338 aa16.51■□□□□ 0.23
HDAC8-210ENST00000412342 C6orf229H3BNL8 230 aa16.51■□□□□ 0.23
HDAC8-210ENST00000412342 PLIN1O60240 522 aa16.51■□□□□ 0.23
HDAC8-210ENST00000412342 ATP2B4P23634 1241 aa16.51■□□□□ 0.23
HDAC8-210ENST00000412342 MTX1Q13505 466 aa16.51■□□□□ 0.23
HDAC8-210ENST00000412342 JDP2Q8WYK2 163 aa16.51■□□□□ 0.23
HDAC8-210ENST00000412342 PUS3Q9BZE2 481 aaKnown RBP16.51■□□□□ 0.23
HDAC8-210ENST00000412342 GPBP1L1Q9HC44 474 aaPredicted RBP16.51■□□□□ 0.23
HDAC8-210ENST00000412342 NMRK2Q9NPI5 230 aa16.51■□□□□ 0.23
HDAC8-210ENST00000412342 MED23Q9ULK4 1368 aa16.51■□□□□ 0.23
HDAC8-210ENST00000412342 KDM2BQ8NHM5 1336 aa16.5■□□□□ 0.23
HDAC8-210ENST00000412342 SCN4AP35499 1836 aa16.5■□□□□ 0.23
HDAC8-210ENST00000412342 YDJCA8MPS7 323 aa16.5■□□□□ 0.23
HDAC8-210ENST00000412342 KIF3CO14782 793 aa16.5■□□□□ 0.23
HDAC8-210ENST00000412342 ZBTB7BO15156 539 aaPredicted RBP16.5■□□□□ 0.23
HDAC8-210ENST00000412342 WASHC4Q2M389 1173 aa16.5■□□□□ 0.23
HDAC8-210ENST00000412342 LDHAL6AQ6ZMR3 332 aa16.5■□□□□ 0.23
HDAC8-210ENST00000412342 NIM1KQ8IY84 436 aa16.5■□□□□ 0.23
HDAC8-210ENST00000412342 KLHDC4Q8TBB5 520 aa16.5■□□□□ 0.23
HDAC8-210ENST00000412342 ANKRD2Q9GZV1 360 aa16.5■□□□□ 0.23
HDAC8-210ENST00000412342 RIPOR2Q9Y4F9 1068 aa16.5■□□□□ 0.23
HDAC8-210ENST00000412342 POTECB2RU33 542 aa16.49■□□□□ 0.23
HDAC8-210ENST00000412342 DDNO94850 711 aaPredicted RBP16.49■□□□□ 0.23
HDAC8-210ENST00000412342 PTPN12Q05209 780 aaKnown RBP16.49■□□□□ 0.23
HDAC8-210ENST00000412342 ITPRIPQ8IWB1 547 aa16.49■□□□□ 0.23
HDAC8-210ENST00000412342 EYA3Q99504 573 aa16.49■□□□□ 0.23
HDAC8-210ENST00000412342 ZNRF3Q9ULT6 936 aa16.49■□□□□ 0.23
HDAC8-210ENST00000412342 HDAC5Q9UQL6 1122 aa16.49■□□□□ 0.23
HDAC8-210ENST00000412342 LEMD3Q9Y2U8 911 aa16.49■□□□□ 0.23
HDAC8-210ENST00000412342 SNAP23O00161 211 aa16.48■□□□□ 0.23
HDAC8-210ENST00000412342 RIMBP2O15034 1052 aa16.48■□□□□ 0.23
HDAC8-210ENST00000412342 TAF5LO75529 589 aa16.48■□□□□ 0.23
HDAC8-210ENST00000412342 GNAI2P04899 355 aa16.48■□□□□ 0.23
HDAC8-210ENST00000412342 KLRK1P26718 216 aa16.48■□□□□ 0.23
HDAC8-210ENST00000412342 LRRC24Q50LG9 513 aa16.48■□□□□ 0.23
HDAC8-210ENST00000412342 TAF7LQ5H9L4 462 aa16.48■□□□□ 0.23
HDAC8-210ENST00000412342 C20orf194Q5TEA3 1177 aa16.48■□□□□ 0.23
HDAC8-210ENST00000412342 HELBQ8NG08 1087 aaPredicted RBP16.48■□□□□ 0.23
HDAC8-210ENST00000412342 L3MBTL3Q96JM7 780 aaPredicted RBP16.48■□□□□ 0.23
HDAC8-210ENST00000412342 ZNF804BA4D1E1 1349 aa16.47■□□□□ 0.23
HDAC8-210ENST00000412342 MS4A1P11836 297 aa16.47■□□□□ 0.23
HDAC8-210ENST00000412342 CXCL9Q07325 125 aa16.47■□□□□ 0.23
HDAC8-210ENST00000412342 DPY19L2Q6NUT2 758 aa16.47■□□□□ 0.23
HDAC8-210ENST00000412342 TXNRD3Q86VQ6 643 aa16.47■□□□□ 0.23
HDAC8-210ENST00000412342 VGLL2Q8N8G2 317 aa16.47■□□□□ 0.23
HDAC8-210ENST00000412342 ZC3H12CQ9C0D7 883 aaKnown RBP16.47■□□□□ 0.23
HDAC8-210ENST00000412342 DBNDD1Q9H9R9 158 aa16.47■□□□□ 0.23
HDAC8-210ENST00000412342 CNNM1Q9NRU3 951 aa16.47■□□□□ 0.23
HDAC8-210ENST00000412342 ECE2O60344 883 aa16.46■□□□□ 0.23
HDAC8-210ENST00000412342 EIF6P56537 245 aaKnown RBP16.46■□□□□ 0.23
HDAC8-210ENST00000412342 PDE3AQ14432 1141 aa16.46■□□□□ 0.23
HDAC8-210ENST00000412342 MVPQ14764 893 aaKnown RBP16.46■□□□□ 0.23
HDAC8-210ENST00000412342 DOK7Q18PE1 504 aa16.46■□□□□ 0.23
HDAC8-210ENST00000412342 C15orf52Q6ZUT6 534 aaKnown RBP16.46■□□□□ 0.23
HDAC8-210ENST00000412342 ATG9AQ7Z3C6 839 aa16.46■□□□□ 0.23
HDAC8-210ENST00000412342 GPC2Q8N158 579 aa16.46■□□□□ 0.23
HDAC8-210ENST00000412342 RRAGCQ9HB90 399 aa16.46■□□□□ 0.23
HDAC8-210ENST00000412342 COPRSQ9NQ92 184 aa16.46■□□□□ 0.23
HDAC8-210ENST00000412342 ADAMTSL1Q8N6G6 1762 aa16.46■□□□□ 0.22
HDAC8-210ENST00000412342 MROH5Q6ZUA9 1318 aa16.45■□□□□ 0.22
HDAC8-210ENST00000412342 EYA2O00167 538 aa16.45■□□□□ 0.22
HDAC8-210ENST00000412342 C1orf115Q9H7X2 142 aa16.45■□□□□ 0.22
HDAC8-210ENST00000412342 KCNQ5Q9NR82 932 aa16.45■□□□□ 0.22
HDAC8-210ENST00000412342 COG6Q9Y2V7 657 aa16.45■□□□□ 0.22
HDAC8-210ENST00000412342 PNMA6EA0A0J9YXQ4 647 aa16.44■□□□□ 0.22
HDAC8-210ENST00000412342 SRGAP3O43295 1099 aa16.44■□□□□ 0.22
HDAC8-210ENST00000412342 FBXO3Q9UK99 471 aa16.44■□□□□ 0.22
HDAC8-210ENST00000412342 PA2G4Q9UQ80 394 aaKnown RBP16.44■□□□□ 0.22
HDAC8-210ENST00000412342 ARAP2Q8WZ64 1704 aa16.44■□□□□ 0.22
HDAC8-210ENST00000412342 ZNF609O15014 1411 aa16.44■□□□□ 0.22
HDAC8-210ENST00000412342 RAD17O75943 681 aa16.43■□□□□ 0.22
HDAC8-210ENST00000412342 CIAO1O76071 339 aa16.43■□□□□ 0.22
HDAC8-210ENST00000412342 SCNN1DP51172 638 aa16.43■□□□□ 0.22
HDAC8-210ENST00000412342 CIAPIN1Q6FI81 312 aa16.43■□□□□ 0.22
HDAC8-210ENST00000412342 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.43■□□□□ 0.22
HDAC8-210ENST00000412342 PDE8BO95263 885 aa16.42■□□□□ 0.22
HDAC8-210ENST00000412342 VEGFAP15692 232 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms