RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 JDP2Q8WYK2 163 aa15.06■□□□□ 0
NEDD1-202ENST00000411739 RTFDC1Q9BY42 306 aaPredicted RBP15.06■□□□□ 0
NEDD1-202ENST00000411739 RRAGCQ9HB90 399 aa15.06■□□□□ 0
NEDD1-202ENST00000411739 RTL9Q8NET4 1388 aa15.06■□□□□ 0
NEDD1-202ENST00000411739 SNAP23O00161 211 aa15.05■□□□□ 0
NEDD1-202ENST00000411739 UFL1O94874 794 aa15.05■□□□□ 0
NEDD1-202ENST00000411739 TAF7LQ5H9L4 462 aa15.05■□□□□ 0
NEDD1-202ENST00000411739 PANK1Q8TE04 598 aa15.05■□□□□ 0
NEDD1-202ENST00000411739 LRRFIP2Q9Y608 721 aaKnown RBP15.05■□□□□ 0
NEDD1-202ENST00000411739 TIAM2Q8IVF5 1701 aa15.05■□□□□ -0
NEDD1-202ENST00000411739 DOK7Q18PE1 504 aa15.05■□□□□ -0
NEDD1-202ENST00000411739 GRIPAP1Q4V328 841 aa15.05■□□□□ -0
NEDD1-202ENST00000411739 PUS3Q9BZE2 481 aaKnown RBP15.05■□□□□ -0
NEDD1-202ENST00000411739 DUOX1Q9NRD9 1551 aa15.05■□□□□ -0
NEDD1-202ENST00000411739 GLTPD2A6NH11 291 aa15.04■□□□□ -0
NEDD1-202ENST00000411739 TAF5LO75529 589 aa15.04■□□□□ -0
NEDD1-202ENST00000411739 WASHC4Q2M389 1173 aa15.04■□□□□ -0
NEDD1-202ENST00000411739 FTSJ3Q8IY81 847 aaKnown RBP15.04■□□□□ -0
NEDD1-202ENST00000411739 DZIP1LQ8IYY4 767 aaKnown RBP15.04■□□□□ -0
NEDD1-202ENST00000411739 SUPT20HQ8NEM7 779 aa15.04■□□□□ -0
NEDD1-202ENST00000411739 DBNDD1Q9H9R9 158 aa15.04■□□□□ -0
NEDD1-202ENST00000411739 GGA1Q9UJY5 639 aa15.04■□□□□ -0
NEDD1-202ENST00000411739 LRRC37AA6NMS7 1700 aa15.03■□□□□ -0
NEDD1-202ENST00000411739 DPY19L2Q6NUT2 758 aa15.03■□□□□ -0
NEDD1-202ENST00000411739 NIM1KQ8IY84 436 aa15.03■□□□□ -0
NEDD1-202ENST00000411739 GJA3Q9Y6H8 435 aa15.03■□□□□ -0
NEDD1-202ENST00000411739 CHRNDQ07001 517 aa15.03■□□□□ -0
NEDD1-202ENST00000411739 KIAA2012Q0VF49 1180 aa15.03■□□□□ -0
NEDD1-202ENST00000411739 RABL6Q3YEC7 729 aaPredicted RBP15.03■□□□□ -0
NEDD1-202ENST00000411739 LDHAL6AQ6ZMR3 332 aa15.03■□□□□ -0
NEDD1-202ENST00000411739 ITPRIPQ8IWB1 547 aa15.03■□□□□ -0
NEDD1-202ENST00000411739 KCNQ5Q9NR82 932 aa15.03■□□□□ -0
NEDD1-202ENST00000411739 DICER1Q9UPY3 1922 aaKnown RBP15.03■□□□□ -0
NEDD1-202ENST00000411739 XDHP47989 1333 aa15.03■□□□□ -0
NEDD1-202ENST00000411739 FZD9O00144 591 aa15.02■□□□□ -0
NEDD1-202ENST00000411739 CNNM1Q9NRU3 951 aa15.02■□□□□ -0
NEDD1-202ENST00000411739 PODXL2Q9NZ53 605 aa15.02■□□□□ -0
NEDD1-202ENST00000411739 KDM2BQ8NHM5 1336 aa15.02■□□□□ -0
NEDD1-202ENST00000411739 RAD17O75943 681 aa15.02□□□□□ -0.01
NEDD1-202ENST00000411739 KLRK1P26718 216 aa15.02□□□□□ -0.01
NEDD1-202ENST00000411739 C1orf115Q9H7X2 142 aa15.02□□□□□ -0.01
NEDD1-202ENST00000411739 KIF3CO14782 793 aa15.01□□□□□ -0.01
NEDD1-202ENST00000411739 LRRC24Q50LG9 513 aa15.01□□□□□ -0.01
NEDD1-202ENST00000411739 ZC3H12CQ9C0D7 883 aaKnown RBP15.01□□□□□ -0.01
NEDD1-202ENST00000411739 YDJCA8MPS7 323 aa15.01□□□□□ -0.01
NEDD1-202ENST00000411739 EIF6P56537 245 aaKnown RBP15.01□□□□□ -0.01
NEDD1-202ENST00000411739 TXNRD3Q86VQ6 643 aa15.01□□□□□ -0.01
NEDD1-202ENST00000411739 POTECB2RU33 542 aa15□□□□□ -0.01
NEDD1-202ENST00000411739 C20orf194Q5TEA3 1177 aa15□□□□□ -0.01
NEDD1-202ENST00000411739 ZNRF3Q9ULT6 936 aa15□□□□□ -0.01
NEDD1-202ENST00000411739 ZC3H4Q9UPT8 1303 aaKnown RBP15□□□□□ -0.01
NEDD1-202ENST00000411739 ATP2B4P23634 1241 aa15□□□□□ -0.01
NEDD1-202ENST00000411739 CXCL9Q07325 125 aa15□□□□□ -0.01
NEDD1-202ENST00000411739 EYA3Q99504 573 aa15□□□□□ -0.01
NEDD1-202ENST00000411739 SIL1Q9H173 461 aa15□□□□□ -0.01
NEDD1-202ENST00000411739 GNAI3P08754 354 aa14.99□□□□□ -0.01
NEDD1-202ENST00000411739 PA2G4Q9UQ80 394 aaKnown RBP14.99□□□□□ -0.01
NEDD1-202ENST00000411739 LTBP1Q14766 1721 aa14.99□□□□□ -0.01
NEDD1-202ENST00000411739 G3V3G9 751 aa14.99□□□□□ -0.01
NEDD1-202ENST00000411739 ECE2O60344 883 aa14.99□□□□□ -0.01
NEDD1-202ENST00000411739 KCNJ4P48050 445 aa14.99□□□□□ -0.01
NEDD1-202ENST00000411739 RFX5P48382 616 aaPredicted RBP14.99□□□□□ -0.01
NEDD1-202ENST00000411739 DCAF8Q5TAQ9 597 aa14.99□□□□□ -0.01
NEDD1-202ENST00000411739 COG6Q9Y2V7 657 aa14.99□□□□□ -0.01
NEDD1-202ENST00000411739 ZNF804BA4D1E1 1349 aa14.99□□□□□ -0.01
NEDD1-202ENST00000411739 ANKRD2Q9GZV1 360 aa14.98□□□□□ -0.01
NEDD1-202ENST00000411739 VPS33BQ9H267 617 aa14.98□□□□□ -0.01
NEDD1-202ENST00000411739 RIPOR2Q9Y4F9 1068 aa14.98□□□□□ -0.01
NEDD1-202ENST00000411739 ZBTB7BO15156 539 aaPredicted RBP14.97□□□□□ -0.01
NEDD1-202ENST00000411739 GNAI2P04899 355 aa14.97□□□□□ -0.01
NEDD1-202ENST00000411739 PTPN12Q05209 780 aaKnown RBP14.97□□□□□ -0.01
NEDD1-202ENST00000411739 ZBTB12Q9Y330 459 aaPredicted RBP14.97□□□□□ -0.01
NEDD1-202ENST00000411739 SRGAP3O43295 1099 aa14.96□□□□□ -0.01
NEDD1-202ENST00000411739 POTEIP0CG38 1075 aa14.96□□□□□ -0.01
NEDD1-202ENST00000411739 POTEJP0CG39 1038 aa14.96□□□□□ -0.01
NEDD1-202ENST00000411739 VEGFAP15692 232 aaPredicted RBP14.96□□□□□ -0.01
NEDD1-202ENST00000411739 CIAPIN1Q6FI81 312 aa14.96□□□□□ -0.01
NEDD1-202ENST00000411739 GPC2Q8N158 579 aa14.96□□□□□ -0.01
NEDD1-202ENST00000411739 LEMD3Q9Y2U8 911 aa14.96□□□□□ -0.01
NEDD1-202ENST00000411739 PNMA6EA0A0J9YXQ4 647 aa14.95□□□□□ -0.02
NEDD1-202ENST00000411739 SHTN1A0MZ66 631 aa14.95□□□□□ -0.02
NEDD1-202ENST00000411739 PSMD14O00487 310 aa14.95□□□□□ -0.02
NEDD1-202ENST00000411739 METTL24Q5JXM2 366 aa14.95□□□□□ -0.02
NEDD1-202ENST00000411739 EPS15P42566 896 aa14.94□□□□□ -0.02
NEDD1-202ENST00000411739 C16orf71Q8IYS4 520 aaPredicted RBP14.94□□□□□ -0.02
NEDD1-202ENST00000411739 FBXW7Q969H0 707 aa14.94□□□□□ -0.02
NEDD1-202ENST00000411739 MXD3Q9BW11 206 aa14.94□□□□□ -0.02
NEDD1-202ENST00000411739 EYA2O00167 538 aa14.94□□□□□ -0.02
NEDD1-202ENST00000411739 GMPSP49915 693 aaPredicted RBP14.94□□□□□ -0.02
NEDD1-202ENST00000411739 HDAC5Q9UQL6 1122 aa14.94□□□□□ -0.02
NEDD1-202ENST00000411739 SCNN1DP51172 638 aa14.93□□□□□ -0.02
NEDD1-202ENST00000411739 EAPPQ56P03 285 aaPredicted RBP14.93□□□□□ -0.02
NEDD1-202ENST00000411739 ATG9AQ7Z3C6 839 aa14.93□□□□□ -0.02
NEDD1-202ENST00000411739 MED23Q9ULK4 1368 aa14.93□□□□□ -0.02
NEDD1-202ENST00000411739 MVPQ14764 893 aaKnown RBP14.93□□□□□ -0.02
NEDD1-202ENST00000411739 L3MBTL3Q96JM7 780 aaPredicted RBP14.93□□□□□ -0.02
NEDD1-202ENST00000411739 JAG2Q9Y219 1238 aa14.93□□□□□ -0.02
NEDD1-202ENST00000411739 MROH5Q6ZUA9 1318 aa14.93□□□□□ -0.02
NEDD1-202ENST00000411739 GYG1P46976 350 aa14.92□□□□□ -0.02
NEDD1-202ENST00000411739 C1QTNF8P60827 252 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms