RNA–Protein interactions for RNA: ENST00000411066.1

RN7SKP259-201, Transcript of RNA, 7SK small nuclear pseudogene 259, humanhuman

BASIC

Gene RN7SKP259, Length 333 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP259-201ENST00000411066 VPS53Q5VIR6 699 aa12.9□□□□□ -0.34
RN7SKP259-201ENST00000411066 PRPF40BQ6NWY9 871 aaKnown RBP12.9□□□□□ -0.34
RN7SKP259-201ENST00000411066 LDHAL6AQ6ZMR3 332 aa12.9□□□□□ -0.34
RN7SKP259-201ENST00000411066 SYNE4Q8N205 404 aa12.9□□□□□ -0.34
RN7SKP259-201ENST00000411066 EDC3Q96F86 508 aaKnown RBP12.9□□□□□ -0.34
RN7SKP259-201ENST00000411066 ZNF512BQ96KM6 892 aaPredicted RBP12.9□□□□□ -0.34
RN7SKP259-201ENST00000411066 GREM2Q9H772 168 aa12.9□□□□□ -0.34
RN7SKP259-201ENST00000411066 SLC27A2O14975 620 aa12.89□□□□□ -0.35
RN7SKP259-201ENST00000411066 SSFA2P28290 1259 aa12.89□□□□□ -0.35
RN7SKP259-201ENST00000411066 KRT32Q14532 448 aa12.89□□□□□ -0.35
RN7SKP259-201ENST00000411066 ATP2B3Q16720 1220 aa12.89□□□□□ -0.35
RN7SKP259-201ENST00000411066 METTL24Q5JXM2 366 aa12.89□□□□□ -0.35
RN7SKP259-201ENST00000411066 TTC39AQ5SRH9 613 aa12.89□□□□□ -0.35
RN7SKP259-201ENST00000411066 GORABQ5T7V8 394 aa12.89□□□□□ -0.35
RN7SKP259-201ENST00000411066 SUSD4Q5VX71 490 aa12.89□□□□□ -0.35
RN7SKP259-201ENST00000411066 XAGE2Q96GT9 111 aa12.89□□□□□ -0.35
RN7SKP259-201ENST00000411066 ZSCAN31Q96LW9 406 aaPredicted RBP12.89□□□□□ -0.35
RN7SKP259-201ENST00000411066 ALDH8A1Q9H2A2 487 aaPredicted RBP12.89□□□□□ -0.35
RN7SKP259-201ENST00000411066 CNNM1Q9NRU3 951 aa12.89□□□□□ -0.35
RN7SKP259-201ENST00000411066 LIMCH1Q9UPQ0 1083 aa12.89□□□□□ -0.35
RN7SKP259-201ENST00000411066 CYP46A1Q9Y6A2 500 aa12.89□□□□□ -0.35
RN7SKP259-201ENST00000411066 U3KPZ7 1027 aaPredicted RBP12.89□□□□□ -0.35
RN7SKP259-201ENST00000411066 RPAP1Q9BWH6 1393 aaPredicted RBP12.89□□□□□ -0.35
RN7SKP259-201ENST00000411066 BTAF1O14981 1849 aa12.88□□□□□ -0.35
RN7SKP259-201ENST00000411066 GOLGA6L22H0YM25 854 aa12.88□□□□□ -0.35
RN7SKP259-201ENST00000411066 GOLIM4O00461 696 aa12.88□□□□□ -0.35
RN7SKP259-201ENST00000411066 ZFYP08048 801 aaPredicted RBP12.88□□□□□ -0.35
RN7SKP259-201ENST00000411066 CASTP20810 708 aaKnown RBP12.88□□□□□ -0.35
RN7SKP259-201ENST00000411066 SKOR2Q2VWA4 1001 aaPredicted RBP12.88□□□□□ -0.35
RN7SKP259-201ENST00000411066 ZMYM1Q5SVZ6 1142 aa12.88□□□□□ -0.35
RN7SKP259-201ENST00000411066 DDX46Q7L014 1031 aaKnown RBP12.88□□□□□ -0.35
RN7SKP259-201ENST00000411066 RUFY3Q7L099 469 aa12.88□□□□□ -0.35
RN7SKP259-201ENST00000411066 ZNF589Q86UQ0 364 aaPredicted RBP12.88□□□□□ -0.35
RN7SKP259-201ENST00000411066 ZGPATQ8N5A5 531 aaKnown RBP12.88□□□□□ -0.35
RN7SKP259-201ENST00000411066 VGLL2Q8N8G2 317 aa12.88□□□□□ -0.35
RN7SKP259-201ENST00000411066 JAKMIP1Q96N16 626 aaKnown RBP12.88□□□□□ -0.35
RN7SKP259-201ENST00000411066 PDRG1Q9NUG6 133 aa12.88□□□□□ -0.35
RN7SKP259-201ENST00000411066 DDX60Q8IY21 1712 aaKnown RBP12.88□□□□□ -0.35
RN7SKP259-201ENST00000411066 MROH5Q6ZUA9 1318 aa12.88□□□□□ -0.35
RN7SKP259-201ENST00000411066 RNF113AO15541 343 aaKnown RBP12.87□□□□□ -0.35
RN7SKP259-201ENST00000411066 NTSR2O95665 410 aa12.87□□□□□ -0.35
RN7SKP259-201ENST00000411066 AK2P54819 239 aa12.87□□□□□ -0.35
RN7SKP259-201ENST00000411066 CCDC152Q4G0S7 254 aa12.87□□□□□ -0.35
RN7SKP259-201ENST00000411066 LINC00116Q8NCU8 138 aa12.87□□□□□ -0.35
RN7SKP259-201ENST00000411066 CCDC85AQ96PX6 553 aaPredicted RBP12.87□□□□□ -0.35
RN7SKP259-201ENST00000411066 DSCC1Q9BVC3 393 aa12.87□□□□□ -0.35
RN7SKP259-201ENST00000411066 SH2B1Q9NRF2 756 aaPredicted RBP12.87□□□□□ -0.35
RN7SKP259-201ENST00000411066 NIP7Q9Y221 180 aaKnown RBP eCLIP12.87□□□□□ -0.35
RN7SKP259-201ENST00000411066 ARAP2Q8WZ64 1704 aa12.87□□□□□ -0.35
RN7SKP259-201ENST00000411066 SCN7AQ01118 1682 aa12.86□□□□□ -0.35
RN7SKP259-201ENST00000411066 TRAK2O60296 914 aa12.86□□□□□ -0.35
RN7SKP259-201ENST00000411066 ONECUT3O60422 494 aaPredicted RBP12.86□□□□□ -0.35
RN7SKP259-201ENST00000411066 PDE8BO95263 885 aa12.86□□□□□ -0.35
RN7SKP259-201ENST00000411066 BAG4O95429 457 aaKnown RBP12.86□□□□□ -0.35
RN7SKP259-201ENST00000411066 ADORA1P30542 326 aa12.86□□□□□ -0.35
RN7SKP259-201ENST00000411066 ANKRD1Q15327 319 aa12.86□□□□□ -0.35
RN7SKP259-201ENST00000411066 GJD4Q96KN9 370 aaPredicted RBP12.86□□□□□ -0.35
RN7SKP259-201ENST00000411066 ATRNO75882 1429 aa12.86□□□□□ -0.35
RN7SKP259-201ENST00000411066 RPS6KA4O75676 772 aa12.85□□□□□ -0.35
RN7SKP259-201ENST00000411066 UQCRFS1P1P0C7P4 283 aa12.85□□□□□ -0.35
RN7SKP259-201ENST00000411066 ADCK5Q3MIX3 580 aa12.85□□□□□ -0.35
RN7SKP259-201ENST00000411066 MEX3CQ5U5Q3 659 aaKnown RBP12.85□□□□□ -0.35
RN7SKP259-201ENST00000411066 BLOC1S2Q6QNY1 142 aa12.85□□□□□ -0.35
RN7SKP259-201ENST00000411066 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.85□□□□□ -0.35
RN7SKP259-201ENST00000411066 NDUFB9Q9Y6M9 179 aa12.85□□□□□ -0.35
RN7SKP259-201ENST00000411066 MYH7P12883 1935 aa12.84□□□□□ -0.35
RN7SKP259-201ENST00000411066 AKAP11Q9UKA4 1901 aa12.84□□□□□ -0.35
RN7SKP259-201ENST00000411066 BRD1O95696 1058 aa12.84□□□□□ -0.35
RN7SKP259-201ENST00000411066 PDIA4P13667 645 aaKnown RBP12.84□□□□□ -0.35
RN7SKP259-201ENST00000411066 HCLS1P14317 486 aaPredicted RBP12.84□□□□□ -0.35
RN7SKP259-201ENST00000411066 FGFR2P21802 821 aa12.84□□□□□ -0.35
RN7SKP259-201ENST00000411066 RPS6KB1P23443 525 aa12.84□□□□□ -0.35
RN7SKP259-201ENST00000411066 TTF1Q15361 905 aaPredicted RBP12.84□□□□□ -0.35
RN7SKP259-201ENST00000411066 PUM3Q15397 648 aaKnown RBP12.84□□□□□ -0.35
RN7SKP259-201ENST00000411066 ZSCAN25Q6NSZ9 544 aa12.84□□□□□ -0.35
RN7SKP259-201ENST00000411066 LPIN2Q92539 896 aa12.84□□□□□ -0.35
RN7SKP259-201ENST00000411066 ZDHHC9Q9Y397 364 aa12.84□□□□□ -0.35
RN7SKP259-201ENST00000411066 LY75O60449 1722 aa12.84□□□□□ -0.35
RN7SKP259-201ENST00000411066 SBF2Q86WG5 1849 aa12.83□□□□□ -0.35
RN7SKP259-201ENST00000411066 SLC5A1P13866 664 aa12.83□□□□□ -0.36
RN7SKP259-201ENST00000411066 ARID4AP29374 1257 aaPredicted RBP12.83□□□□□ -0.36
RN7SKP259-201ENST00000411066 IGHMBP2P38935 993 aaKnown RBP12.83□□□□□ -0.36
RN7SKP259-201ENST00000411066 FKBP4Q02790 459 aaKnown RBP eCLIP12.83□□□□□ -0.36
RN7SKP259-201ENST00000411066 SLC10A5Q5PT55 438 aa12.83□□□□□ -0.36
RN7SKP259-201ENST00000411066 NOL8Q76FK4 1167 aaKnown RBP12.83□□□□□ -0.36
RN7SKP259-201ENST00000411066 SEC62Q99442 399 aaKnown RBP12.83□□□□□ -0.36
RN7SKP259-201ENST00000411066 MPHOSPH8Q99549 860 aa12.83□□□□□ -0.36
RN7SKP259-201ENST00000411066 NARFQ9UHQ1 456 aa12.83□□□□□ -0.36
RN7SKP259-201ENST00000411066 TRPC5Q9UL62 973 aaPredicted RBP12.83□□□□□ -0.36
RN7SKP259-201ENST00000411066 AFF2P51816 1311 aa12.83□□□□□ -0.36
RN7SKP259-201ENST00000411066 HMGB1P09429 215 aaKnown RBP12.82□□□□□ -0.36
RN7SKP259-201ENST00000411066 ZAP70P43403 619 aa12.82□□□□□ -0.36
RN7SKP259-201ENST00000411066 SF3B3Q15393 1217 aaKnown RBP12.82□□□□□ -0.36
RN7SKP259-201ENST00000411066 CCDC129Q6ZRS4 1044 aa12.82□□□□□ -0.36
RN7SKP259-201ENST00000411066 APPBP2Q92624 585 aa12.82□□□□□ -0.36
RN7SKP259-201ENST00000411066 CDC5LQ99459 802 aaKnown RBP12.82□□□□□ -0.36
RN7SKP259-201ENST00000411066 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.82□□□□□ -0.36
RN7SKP259-201ENST00000411066 NYXQ9GZU5 481 aa12.82□□□□□ -0.36
RN7SKP259-201ENST00000411066 TAF1LQ8IZX4 1826 aa12.82□□□□□ -0.36
RN7SKP259-201ENST00000411066 MAST3O60307 1309 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms