RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 FBXO3Q9UK99 471 aa12.35□□□□□ -0.43
NIF3L1-202ENST00000409020 NSFL1CQ9UNZ2 370 aaKnown RBP12.35□□□□□ -0.43
NIF3L1-202ENST00000409020 ZNF521Q96K83 1311 aa12.34□□□□□ -0.43
NIF3L1-202ENST00000409020 WTIPA6NIX2 430 aaPredicted RBP12.34□□□□□ -0.43
NIF3L1-202ENST00000409020 RAD17O75943 681 aa12.34□□□□□ -0.43
NIF3L1-202ENST00000409020 MAP1SQ66K74 1059 aaPredicted RBP12.34□□□□□ -0.43
NIF3L1-202ENST00000409020 LDHDQ86WU2 507 aa12.34□□□□□ -0.43
NIF3L1-202ENST00000409020 SHTN1A0MZ66 631 aa12.33□□□□□ -0.44
NIF3L1-202ENST00000409020 RIMBP2O15034 1052 aa12.33□□□□□ -0.44
NIF3L1-202ENST00000409020 RPS8P62241 208 aaKnown RBP12.33□□□□□ -0.44
NIF3L1-202ENST00000409020 KCNQ5Q9NR82 932 aa12.33□□□□□ -0.44
NIF3L1-202ENST00000409020 ZNRF3Q9ULT6 936 aa12.33□□□□□ -0.44
NIF3L1-202ENST00000409020 PASKQ96RG2 1323 aa12.33□□□□□ -0.44
NIF3L1-202ENST00000409020 F6X3S4 739 aa12.32□□□□□ -0.44
NIF3L1-202ENST00000409020 PDE8AO60658 829 aa12.32□□□□□ -0.44
NIF3L1-202ENST00000409020 ITGBL1O95965 494 aaPredicted RBP12.32□□□□□ -0.44
NIF3L1-202ENST00000409020 FMR1Q06787 632 aaKnown RBP eCLIP12.32□□□□□ -0.44
NIF3L1-202ENST00000409020 FKBP5Q13451 457 aaPredicted RBP12.32□□□□□ -0.44
NIF3L1-202ENST00000409020 SUPT20HQ8NEM7 779 aa12.32□□□□□ -0.44
NIF3L1-202ENST00000409020 GREM2Q9H772 168 aa12.32□□□□□ -0.44
NIF3L1-202ENST00000409020 DBNDD1Q9H9R9 158 aa12.32□□□□□ -0.44
NIF3L1-202ENST00000409020 CLEC11AQ9Y240 323 aa12.32□□□□□ -0.44
NIF3L1-202ENST00000409020 CDHR2Q9BYE9 1310 aa12.32□□□□□ -0.44
NIF3L1-202ENST00000409020 GMPSP49915 693 aaPredicted RBP12.32□□□□□ -0.44
NIF3L1-202ENST00000409020 CTSWP56202 376 aa12.32□□□□□ -0.44
NIF3L1-202ENST00000409020 CCDC152Q4G0S7 254 aa12.32□□□□□ -0.44
NIF3L1-202ENST00000409020 UBE3BQ7Z3V4 1068 aa12.32□□□□□ -0.44
NIF3L1-202ENST00000409020 TMC4Q7Z404 712 aa12.32□□□□□ -0.44
NIF3L1-202ENST00000409020 TBC1D16Q8TBP0 767 aa12.32□□□□□ -0.44
NIF3L1-202ENST00000409020 CHMP4AQ9BY43 222 aa12.32□□□□□ -0.44
NIF3L1-202ENST00000409020 C6orf229H3BNL8 230 aa12.31□□□□□ -0.44
NIF3L1-202ENST00000409020 CASP7P55210 303 aa12.31□□□□□ -0.44
NIF3L1-202ENST00000409020 NEXNQ0ZGT2 675 aa12.31□□□□□ -0.44
NIF3L1-202ENST00000409020 GCKRQ14397 625 aa12.31□□□□□ -0.44
NIF3L1-202ENST00000409020 DOK7Q18PE1 504 aa12.31□□□□□ -0.44
NIF3L1-202ENST00000409020 WASHC4Q2M389 1173 aa12.31□□□□□ -0.44
NIF3L1-202ENST00000409020 TTLL11Q8NHH1 800 aa12.31□□□□□ -0.44
NIF3L1-202ENST00000409020 DNAAF4Q8WXU2 420 aa12.31□□□□□ -0.44
NIF3L1-202ENST00000409020 VPS33BQ9H267 617 aa12.31□□□□□ -0.44
NIF3L1-202ENST00000409020 ZBTB12Q9Y330 459 aaPredicted RBP12.31□□□□□ -0.44
NIF3L1-202ENST00000409020 H7C1W4 665 aa12.3□□□□□ -0.44
NIF3L1-202ENST00000409020 MYH16Q9H6N6 1097 aa12.3□□□□□ -0.44
NIF3L1-202ENST00000409020 GPRC5DQ9NZD1 345 aa12.3□□□□□ -0.44
NIF3L1-202ENST00000409020 RTL9Q8NET4 1388 aa12.3□□□□□ -0.44
NIF3L1-202ENST00000409020 LMOD1P29536 600 aaPredicted RBP12.29□□□□□ -0.44
NIF3L1-202ENST00000409020 RBM10P98175 930 aaKnown RBP12.29□□□□□ -0.44
NIF3L1-202ENST00000409020 CIAPIN1Q6FI81 312 aa12.29□□□□□ -0.44
NIF3L1-202ENST00000409020 PNMA8AQ86V59 439 aaPredicted RBP12.29□□□□□ -0.44
NIF3L1-202ENST00000409020 CNTROBQ8N137 903 aa12.29□□□□□ -0.44
NIF3L1-202ENST00000409020 YTHDC1Q96MU7 727 aaKnown RBP12.29□□□□□ -0.44
NIF3L1-202ENST00000409020 MKRN1Q9UHC7 482 aaKnown RBP12.29□□□□□ -0.44
NIF3L1-202ENST00000409020 PSMD14O00487 310 aa12.29□□□□□ -0.44
NIF3L1-202ENST00000409020 ECE2O60344 883 aa12.29□□□□□ -0.44
NIF3L1-202ENST00000409020 UFL1O94874 794 aa12.29□□□□□ -0.44
NIF3L1-202ENST00000409020 VASPP50552 380 aaPredicted RBP12.29□□□□□ -0.44
NIF3L1-202ENST00000409020 HIRAP54198 1017 aaPredicted RBP12.29□□□□□ -0.44
NIF3L1-202ENST00000409020 FAM161AQ3B820 660 aa12.29□□□□□ -0.44
NIF3L1-202ENST00000409020 JMYQ8N9B5 988 aa12.29□□□□□ -0.44
NIF3L1-202ENST00000409020 TRPM4Q8TD43 1214 aa12.29□□□□□ -0.44
NIF3L1-202ENST00000409020 ANKIB1Q9P2G1 1089 aa12.29□□□□□ -0.44
NIF3L1-202ENST00000409020 TRAF5O00463 557 aa12.28□□□□□ -0.44
NIF3L1-202ENST00000409020 EGFRP00533 1210 aa12.28□□□□□ -0.44
NIF3L1-202ENST00000409020 BEND3Q5T5X7 828 aa12.28□□□□□ -0.44
NIF3L1-202ENST00000409020 ANKRD18AQ8IVF6 992 aa12.28□□□□□ -0.44
NIF3L1-202ENST00000409020 LINS1Q8NG48 757 aa12.28□□□□□ -0.44
NIF3L1-202ENST00000409020 CDCA7LQ96GN5 454 aa12.28□□□□□ -0.44
NIF3L1-202ENST00000409020 CREBZFQ9NS37 354 aa12.28□□□□□ -0.44
NIF3L1-202ENST00000409020 SPEF2Q9C093 1822 aa12.27□□□□□ -0.44
NIF3L1-202ENST00000409020 HSP90B1P14625 803 aaKnown RBP12.27□□□□□ -0.45
NIF3L1-202ENST00000409020 DLK2Q6UY11 383 aa12.27□□□□□ -0.45
NIF3L1-202ENST00000409020 ADARB2Q9NS39 739 aaKnown RBP12.27□□□□□ -0.45
NIF3L1-202ENST00000409020 SCN9AQ15858 1988 aa12.27□□□□□ -0.45
NIF3L1-202ENST00000409020 EPHA10Q5JZY3 1008 aa12.26□□□□□ -0.45
NIF3L1-202ENST00000409020 USP50Q70EL3 339 aaPredicted RBP12.26□□□□□ -0.45
NIF3L1-202ENST00000409020 BCL2L13Q9BXK5 485 aa12.26□□□□□ -0.45
NIF3L1-202ENST00000409020 GGA1Q9UJY5 639 aa12.26□□□□□ -0.45
NIF3L1-202ENST00000409020 MINPP1Q9UNW1 487 aa12.26□□□□□ -0.45
NIF3L1-202ENST00000409020 ITGA6P23229 1130 aa12.26□□□□□ -0.45
NIF3L1-202ENST00000409020 KLRK1P26718 216 aa12.26□□□□□ -0.45
NIF3L1-202ENST00000409020 FOXO4P98177 505 aa12.26□□□□□ -0.45
NIF3L1-202ENST00000409020 TNIP1Q15025 636 aa12.26□□□□□ -0.45
NIF3L1-202ENST00000409020 MICALL2Q8IY33 904 aa12.26□□□□□ -0.45
NIF3L1-202ENST00000409020 EYA3Q99504 573 aa12.26□□□□□ -0.45
NIF3L1-202ENST00000409020 PLA2G12BQ9BX93 195 aa12.26□□□□□ -0.45
NIF3L1-202ENST00000409020 CNOT7Q9UIV1 285 aaKnown RBP12.26□□□□□ -0.45
NIF3L1-202ENST00000409020 XDHP47989 1333 aa12.25□□□□□ -0.45
NIF3L1-202ENST00000409020 MYH3P11055 1940 aa12.25□□□□□ -0.45
NIF3L1-202ENST00000409020 TMEM88BA6NKF7 163 aa12.25□□□□□ -0.45
NIF3L1-202ENST00000409020 CSF1RP07333 972 aa12.25□□□□□ -0.45
NIF3L1-202ENST00000409020 SAMD7Q7Z3H4 446 aa12.25□□□□□ -0.45
NIF3L1-202ENST00000409020 MRPL50Q8N5N7 158 aaKnown RBP12.25□□□□□ -0.45
NIF3L1-202ENST00000409020 CDC5LQ99459 802 aaKnown RBP12.25□□□□□ -0.45
NIF3L1-202ENST00000409020 GLIS2Q9BZE0 524 aaPredicted RBP12.25□□□□□ -0.45
NIF3L1-202ENST00000409020 ZC3H12CQ9C0D7 883 aaKnown RBP12.25□□□□□ -0.45
NIF3L1-202ENST00000409020 BSDC1Q9NW68 430 aaPredicted RBP12.25□□□□□ -0.45
NIF3L1-202ENST00000409020 CNTNAP1P78357 1384 aa12.25□□□□□ -0.45
NIF3L1-202ENST00000409020 SNAP23O00161 211 aa12.24□□□□□ -0.45
NIF3L1-202ENST00000409020 SLFN5Q08AF3 891 aa12.24□□□□□ -0.45
NIF3L1-202ENST00000409020 TBC1D10BQ4KMP7 808 aaPredicted RBP12.24□□□□□ -0.45
NIF3L1-202ENST00000409020 CST9Q5W186 159 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms