RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 TTLL7Q6ZT98 887 aa15.87■□□□□ 0.13
SMARCB1-203ENST00000407082 PHAXQ9H814 394 aaKnown RBP15.87■□□□□ 0.13
SMARCB1-203ENST00000407082 NIP7Q9Y221 180 aaKnown RBP eCLIP15.87■□□□□ 0.13
SMARCB1-203ENST00000407082 ZNF652Q9Y2D9 606 aa15.87■□□□□ 0.13
SMARCB1-203ENST00000407082 KIF6Q6ZMV9 814 aa15.86■□□□□ 0.13
SMARCB1-203ENST00000407082 ADAMTSL1Q8N6G6 1762 aa15.85■□□□□ 0.13
SMARCB1-203ENST00000407082 DEKP35659 375 aaKnown RBP15.85■□□□□ 0.13
SMARCB1-203ENST00000407082 MAP2K2P36507 400 aa15.85■□□□□ 0.13
SMARCB1-203ENST00000407082 CASC1Q6TDU7 716 aa15.85■□□□□ 0.13
SMARCB1-203ENST00000407082 CLEC4GQ6UXB4 293 aa15.85■□□□□ 0.13
SMARCB1-203ENST00000407082 G2E3Q7L622 706 aa15.85■□□□□ 0.13
SMARCB1-203ENST00000407082 LARGE2Q8N3Y3 721 aa15.85■□□□□ 0.13
SMARCB1-203ENST00000407082 TLL2Q9Y6L7 1015 aa15.85■□□□□ 0.13
SMARCB1-203ENST00000407082 ERVV-1B6SEH8 477 aa15.84■□□□□ 0.13
SMARCB1-203ENST00000407082 MFAP1P55081 439 aaKnown RBP15.84■□□□□ 0.13
SMARCB1-203ENST00000407082 ANKRD13DQ6ZTN6 518 aa15.84■□□□□ 0.13
SMARCB1-203ENST00000407082 ZBTB3Q9H5J0 574 aa15.84■□□□□ 0.13
SMARCB1-203ENST00000407082 ZNF408Q9H9D4 720 aa15.84■□□□□ 0.13
SMARCB1-203ENST00000407082 HDAC5Q9UQL6 1122 aa15.84■□□□□ 0.13
SMARCB1-203ENST00000407082 MAP3K15Q6ZN16 1313 aa15.84■□□□□ 0.13
SMARCB1-203ENST00000407082 ARFGEF2Q9Y6D5 1785 aa15.84■□□□□ 0.13
SMARCB1-203ENST00000407082 CDC45O75419 566 aa15.83■□□□□ 0.12
SMARCB1-203ENST00000407082 CELF2O95319 508 aaKnown RBP15.83■□□□□ 0.12
SMARCB1-203ENST00000407082 GNAI2P04899 355 aa15.83■□□□□ 0.12
SMARCB1-203ENST00000407082 RBM25P49756 843 aaKnown RBP15.83■□□□□ 0.12
SMARCB1-203ENST00000407082 FLIIQ13045 1269 aa15.83■□□□□ 0.12
SMARCB1-203ENST00000407082 CEP85Q6P2H3 762 aa15.83■□□□□ 0.12
SMARCB1-203ENST00000407082 HSCBQ8IWL3 235 aa15.83■□□□□ 0.12
SMARCB1-203ENST00000407082 C1orf115Q9H7X2 142 aa15.83■□□□□ 0.12
SMARCB1-203ENST00000407082 CASP8AP2Q9UKL3 1982 aa15.83■□□□□ 0.12
SMARCB1-203ENST00000407082 KLRG2A4D1S0 409 aaPredicted RBP15.82■□□□□ 0.12
SMARCB1-203ENST00000407082 CA12O43570 354 aa15.82■□□□□ 0.12
SMARCB1-203ENST00000407082 DDX58O95786 925 aaKnown RBP15.82■□□□□ 0.12
SMARCB1-203ENST00000407082 SLC4A3P48751 1232 aa15.82■□□□□ 0.12
SMARCB1-203ENST00000407082 SCNN1DP51172 638 aa15.82■□□□□ 0.12
SMARCB1-203ENST00000407082 NFKBIBQ15653 356 aa15.82■□□□□ 0.12
SMARCB1-203ENST00000407082 HLFQ16534 295 aa15.82■□□□□ 0.12
SMARCB1-203ENST00000407082 USP50Q70EL3 339 aaPredicted RBP15.82■□□□□ 0.12
SMARCB1-203ENST00000407082 RIC3Q7Z5B4 369 aa15.82■□□□□ 0.12
SMARCB1-203ENST00000407082 SIRT2Q8IXJ6 389 aa15.82■□□□□ 0.12
SMARCB1-203ENST00000407082 PLBD2Q8NHP8 589 aa15.82■□□□□ 0.12
SMARCB1-203ENST00000407082 PSMD1Q99460 953 aa15.82■□□□□ 0.12
SMARCB1-203ENST00000407082 FKBP5Q13451 457 aaPredicted RBP15.81■□□□□ 0.12
SMARCB1-203ENST00000407082 CIAPIN1Q6FI81 312 aa15.81■□□□□ 0.12
SMARCB1-203ENST00000407082 PI4KAP2A4QPH2 592 aa15.8■□□□□ 0.12
SMARCB1-203ENST00000407082 RGL2O15211 777 aa15.8■□□□□ 0.12
SMARCB1-203ENST00000407082 KSR2Q6VAB6 950 aa15.8■□□□□ 0.12
SMARCB1-203ENST00000407082 GIGYF2Q6Y7W6 1299 aaKnown RBP15.8■□□□□ 0.12
SMARCB1-203ENST00000407082 SAPCD2Q86UD0 394 aa15.8■□□□□ 0.12
SMARCB1-203ENST00000407082 NIM1KQ8IY84 436 aa15.8■□□□□ 0.12
SMARCB1-203ENST00000407082 PI4KAP1Q8N8J0 262 aa15.8■□□□□ 0.12
SMARCB1-203ENST00000407082 RPGRQ92834 1020 aaKnown RBP15.8■□□□□ 0.12
SMARCB1-203ENST00000407082 SNX21Q969T3 373 aa15.8■□□□□ 0.12
SMARCB1-203ENST00000407082 PDE4DIPQ5VU43 2346 aa15.8■□□□□ 0.12
SMARCB1-203ENST00000407082 SOX10P56693 466 aa15.79■□□□□ 0.12
SMARCB1-203ENST00000407082 SLC4A10Q6U841 1118 aa15.79■□□□□ 0.12
SMARCB1-203ENST00000407082 NUTM1Q86Y26 1132 aa15.79■□□□□ 0.12
SMARCB1-203ENST00000407082 GLIS2Q9BZE0 524 aaPredicted RBP15.79■□□□□ 0.12
SMARCB1-203ENST00000407082 MAP3K2Q9Y2U5 619 aa15.79■□□□□ 0.12
SMARCB1-203ENST00000407082 CC2D2BQ6DHV5 1058 aa15.78■□□□□ 0.12
SMARCB1-203ENST00000407082 TBC1D2Q9BYX2 928 aa15.78■□□□□ 0.12
SMARCB1-203ENST00000407082 ADARB2Q9NS39 739 aaKnown RBP15.78■□□□□ 0.12
SMARCB1-203ENST00000407082 TRPM7Q96QT4 1865 aa15.78■□□□□ 0.12
SMARCB1-203ENST00000407082 PPIP5K2O43314 1243 aa15.77■□□□□ 0.12
SMARCB1-203ENST00000407082 TCIRG1Q13488 830 aa15.77■□□□□ 0.12
SMARCB1-203ENST00000407082 HSP90AB3PQ58FF7 597 aa15.77■□□□□ 0.12
SMARCB1-203ENST00000407082 TTC22Q5TAA0 569 aa15.77■□□□□ 0.12
SMARCB1-203ENST00000407082 PLEKHM2Q8IWE5 1019 aa15.77■□□□□ 0.12
SMARCB1-203ENST00000407082 IL27Q8NEV9 243 aa15.77■□□□□ 0.12
SMARCB1-203ENST00000407082 SRCIN1Q9C0H9 1055 aa15.77■□□□□ 0.12
SMARCB1-203ENST00000407082 TMX4Q9H1E5 349 aaPredicted RBP15.77■□□□□ 0.12
SMARCB1-203ENST00000407082 BCORQ6W2J9 1755 aa15.77■□□□□ 0.11
SMARCB1-203ENST00000407082 LTBP1Q14766 1721 aa15.77■□□□□ 0.11
SMARCB1-203ENST00000407082 F6X3S4 739 aa15.76■□□□□ 0.11
SMARCB1-203ENST00000407082 GPTP24298 496 aa15.76■□□□□ 0.11
SMARCB1-203ENST00000407082 ATP8B2P98198 1209 aa15.76■□□□□ 0.11
SMARCB1-203ENST00000407082 DNAAF4Q8WXU2 420 aa15.76■□□□□ 0.11
SMARCB1-203ENST00000407082 MEIS3Q99687 375 aa15.76■□□□□ 0.11
SMARCB1-203ENST00000407082 MYD88Q99836 296 aa15.76■□□□□ 0.11
SMARCB1-203ENST00000407082 METTL22Q9BUU2 404 aaPredicted RBP15.76■□□□□ 0.11
SMARCB1-203ENST00000407082 NYXQ9GZU5 481 aa15.76■□□□□ 0.11
SMARCB1-203ENST00000407082 GPRC5DQ9NZD1 345 aa15.76■□□□□ 0.11
SMARCB1-203ENST00000407082 CHMP5Q9NZZ3 219 aa15.76■□□□□ 0.11
SMARCB1-203ENST00000407082 COL4A5P29400 1685 aa15.76■□□□□ 0.11
SMARCB1-203ENST00000407082 THSD7BQ9C0I4 1608 aa15.76■□□□□ 0.11
SMARCB1-203ENST00000407082 NUP98P52948 1817 aa15.75■□□□□ 0.11
SMARCB1-203ENST00000407082 AOC3Q16853 763 aa15.75■□□□□ 0.11
SMARCB1-203ENST00000407082 SLC51AQ86UW1 340 aa15.75■□□□□ 0.11
SMARCB1-203ENST00000407082 ZNF34Q8IZ26 560 aa15.75■□□□□ 0.11
SMARCB1-203ENST00000407082 RBM17Q96I25 401 aaKnown RBP15.75■□□□□ 0.11
SMARCB1-203ENST00000407082 OSBPL3Q9H4L5 887 aa15.75■□□□□ 0.11
SMARCB1-203ENST00000407082 ATP5J2-PTCD1G3V325 749 aa15.74■□□□□ 0.11
SMARCB1-203ENST00000407082 PPEF1O14829 653 aaPredicted RBP15.74■□□□□ 0.11
SMARCB1-203ENST00000407082 GMPSP49915 693 aaPredicted RBP15.74■□□□□ 0.11
SMARCB1-203ENST00000407082 NEXNQ0ZGT2 675 aa15.74■□□□□ 0.11
SMARCB1-203ENST00000407082 TBC1D9Q6ZT07 1266 aa15.74■□□□□ 0.11
SMARCB1-203ENST00000407082 ZIC5Q96T25 663 aa15.74■□□□□ 0.11
SMARCB1-203ENST00000407082 RAB11FIP3O75154 756 aa15.73■□□□□ 0.11
SMARCB1-203ENST00000407082 REC8O95072 547 aa15.73■□□□□ 0.11
SMARCB1-203ENST00000407082 UBTFL1P0CB47 393 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms