RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 WASHC4Q2M389 1173 aa10.66□□□□□ -0.7
USP16-202ENST00000399973 L3MBTL3Q96JM7 780 aaPredicted RBP10.66□□□□□ -0.7
USP16-202ENST00000399973 EYA3Q99504 573 aa10.66□□□□□ -0.7
USP16-202ENST00000399973 DBNDD1Q9H9R9 158 aa10.66□□□□□ -0.7
USP16-202ENST00000399973 ZNRF3Q9ULT6 936 aa10.66□□□□□ -0.7
USP16-202ENST00000399973 PTPRCP08575 1304 aa10.65□□□□□ -0.7
USP16-202ENST00000399973 XDHP47989 1333 aa10.65□□□□□ -0.7
USP16-202ENST00000399973 G3V3G9 751 aa10.65□□□□□ -0.7
USP16-202ENST00000399973 RAD17O75943 681 aa10.65□□□□□ -0.7
USP16-202ENST00000399973 ITGA6P23229 1130 aa10.65□□□□□ -0.7
USP16-202ENST00000399973 EPHX2P34913 555 aa10.65□□□□□ -0.7
USP16-202ENST00000399973 IGHMBP2P38935 993 aaKnown RBP10.65□□□□□ -0.7
USP16-202ENST00000399973 CASP7P55210 303 aa10.65□□□□□ -0.7
USP16-202ENST00000399973 DCAF8Q5TAQ9 597 aa10.65□□□□□ -0.7
USP16-202ENST00000399973 TBC1D16Q8TBP0 767 aa10.65□□□□□ -0.7
USP16-202ENST00000399973 VPS33BQ9H267 617 aa10.65□□□□□ -0.7
USP16-202ENST00000399973 TAF1DQ9H5J8 278 aaPredicted RBP10.65□□□□□ -0.7
USP16-202ENST00000399973 POLLQ9UGP5 575 aa10.65□□□□□ -0.7
USP16-202ENST00000399973 GGA1Q9UJY5 639 aa10.65□□□□□ -0.7
USP16-202ENST00000399973 CLEC11AQ9Y240 323 aa10.65□□□□□ -0.7
USP16-202ENST00000399973 ZNF646O15015 1829 aaPredicted RBP10.65□□□□□ -0.71
USP16-202ENST00000399973 ECE2O60344 883 aa10.64□□□□□ -0.71
USP16-202ENST00000399973 ALDH1L1O75891 902 aa10.64□□□□□ -0.71
USP16-202ENST00000399973 APLP1P51693 650 aa10.64□□□□□ -0.71
USP16-202ENST00000399973 DOK7Q18PE1 504 aa10.64□□□□□ -0.71
USP16-202ENST00000399973 ALDH1L2Q3SY69 923 aa10.64□□□□□ -0.71
USP16-202ENST00000399973 CIAPIN1Q6FI81 312 aa10.64□□□□□ -0.71
USP16-202ENST00000399973 PLA2G12BQ9BX93 195 aa10.64□□□□□ -0.71
USP16-202ENST00000399973 ANKRD18BA2A2Z9 1011 aa10.63□□□□□ -0.71
USP16-202ENST00000399973 GMPSP49915 693 aaPredicted RBP10.63□□□□□ -0.71
USP16-202ENST00000399973 SCNN1DP51172 638 aa10.63□□□□□ -0.71
USP16-202ENST00000399973 HTRA3P83110 453 aa10.63□□□□□ -0.71
USP16-202ENST00000399973 CXCL9Q07325 125 aa10.63□□□□□ -0.71
USP16-202ENST00000399973 TAF7LQ5H9L4 462 aa10.63□□□□□ -0.71
USP16-202ENST00000399973 CHADLQ6NUI6 762 aa10.63□□□□□ -0.71
USP16-202ENST00000399973 LMBR1LQ6UX01 489 aa10.63□□□□□ -0.71
USP16-202ENST00000399973 LDHDQ86WU2 507 aa10.63□□□□□ -0.71
USP16-202ENST00000399973 TRMT2AQ8IZ69 625 aaKnown RBP10.63□□□□□ -0.71
USP16-202ENST00000399973 MPHOSPH8Q99549 860 aa10.63□□□□□ -0.71
USP16-202ENST00000399973 ZC3H12CQ9C0D7 883 aaKnown RBP10.63□□□□□ -0.71
USP16-202ENST00000399973 TRPM7Q96QT4 1865 aa10.63□□□□□ -0.71
USP16-202ENST00000399973 MYH13Q9UKX3 1938 aa10.62□□□□□ -0.71
USP16-202ENST00000399973 YDJCA8MPS7 323 aa10.62□□□□□ -0.71
USP16-202ENST00000399973 CT47B1P0C2W7 299 aaPredicted RBP10.62□□□□□ -0.71
USP16-202ENST00000399973 KCNJ4P48050 445 aa10.62□□□□□ -0.71
USP16-202ENST00000399973 FOXO4P98177 505 aa10.62□□□□□ -0.71
USP16-202ENST00000399973 IFIT5Q13325 482 aaKnown RBP10.62□□□□□ -0.71
USP16-202ENST00000399973 TNIP1Q15025 636 aa10.62□□□□□ -0.71
USP16-202ENST00000399973 EPHA10Q5JZY3 1008 aa10.62□□□□□ -0.71
USP16-202ENST00000399973 SUCLG2Q96I99 432 aa10.62□□□□□ -0.71
USP16-202ENST00000399973 BSDC1Q9NW68 430 aaPredicted RBP10.62□□□□□ -0.71
USP16-202ENST00000399973 PODXL2Q9NZ53 605 aa10.62□□□□□ -0.71
USP16-202ENST00000399973 MED23Q9ULK4 1368 aa10.62□□□□□ -0.71
USP16-202ENST00000399973 KIF16BQ96L93 1317 aa10.61□□□□□ -0.71
USP16-202ENST00000399973 CSF1RP07333 972 aa10.61□□□□□ -0.71
USP16-202ENST00000399973 NBPF7P0C2Y1 421 aaPredicted RBP10.61□□□□□ -0.71
USP16-202ENST00000399973 ATP2B4P23634 1241 aa10.61□□□□□ -0.71
USP16-202ENST00000399973 EPS15P42566 896 aa10.61□□□□□ -0.71
USP16-202ENST00000399973 CCDC57Q2TAC2 916 aa10.61□□□□□ -0.71
USP16-202ENST00000399973 PNMA8AQ86V59 439 aaPredicted RBP10.61□□□□□ -0.71
USP16-202ENST00000399973 FBXW7Q969H0 707 aa10.61□□□□□ -0.71
USP16-202ENST00000399973 ZNF594Q96JF6 807 aaPredicted RBP10.61□□□□□ -0.71
USP16-202ENST00000399973 GPRC5DQ9NZD1 345 aa10.61□□□□□ -0.71
USP16-202ENST00000399973 NOB1Q9ULX3 412 aaKnown RBP10.61□□□□□ -0.71
USP16-202ENST00000399973 MINPP1Q9UNW1 487 aa10.61□□□□□ -0.71
USP16-202ENST00000399973 U3KPZ7 1027 aaPredicted RBP10.61□□□□□ -0.71
USP16-202ENST00000399973 ARAP2Q8WZ64 1704 aa10.61□□□□□ -0.71
USP16-202ENST00000399973 PSMD14O00487 310 aa10.6□□□□□ -0.71
USP16-202ENST00000399973 CCT4P50991 539 aaKnown RBP10.6□□□□□ -0.71
USP16-202ENST00000399973 MAP1SQ66K74 1059 aaPredicted RBP10.6□□□□□ -0.71
USP16-202ENST00000399973 API5Q9BZZ5 524 aaKnown RBP10.6□□□□□ -0.71
USP16-202ENST00000399973 ANKRD2Q9GZV1 360 aa10.6□□□□□ -0.71
USP16-202ENST00000399973 BICC1Q9H694 974 aaKnown RBP10.6□□□□□ -0.71
USP16-202ENST00000399973 CNNM1Q9NRU3 951 aa10.6□□□□□ -0.71
USP16-202ENST00000399973 ZBTB12Q9Y330 459 aaPredicted RBP10.6□□□□□ -0.71
USP16-202ENST00000399973 ZNF804BA4D1E1 1349 aa10.59□□□□□ -0.71
USP16-202ENST00000399973 SHTN1A0MZ66 631 aa10.59□□□□□ -0.71
USP16-202ENST00000399973 WTIPA6NIX2 430 aaPredicted RBP10.59□□□□□ -0.71
USP16-202ENST00000399973 PLIN1O60240 522 aa10.59□□□□□ -0.71
USP16-202ENST00000399973 RARSP54136 660 aaKnown RBP10.59□□□□□ -0.71
USP16-202ENST00000399973 CHRNDQ07001 517 aa10.59□□□□□ -0.71
USP16-202ENST00000399973 MICALL2Q8IY33 904 aa10.59□□□□□ -0.71
USP16-202ENST00000399973 HELBQ8NG08 1087 aaPredicted RBP10.59□□□□□ -0.71
USP16-202ENST00000399973 FRAT1Q92837 279 aaPredicted RBP10.59□□□□□ -0.71
USP16-202ENST00000399973 KCNQ5Q9NR82 932 aa10.59□□□□□ -0.71
USP16-202ENST00000399973 ADARB2Q9NS39 739 aaKnown RBP10.59□□□□□ -0.71
USP16-202ENST00000399973 ZBED9Q6R2W3 1325 aa10.58□□□□□ -0.71
USP16-202ENST00000399973 TAF5LO75529 589 aa10.58□□□□□ -0.72
USP16-202ENST00000399973 KLRK1P26718 216 aa10.58□□□□□ -0.72
USP16-202ENST00000399973 LDHAL6AQ6ZMR3 332 aa10.58□□□□□ -0.72
USP16-202ENST00000399973 USP50Q70EL3 339 aaPredicted RBP10.58□□□□□ -0.72
USP16-202ENST00000399973 TRPM4Q8TD43 1214 aa10.58□□□□□ -0.72
USP16-202ENST00000399973 UTYO14607 1347 aa10.58□□□□□ -0.72
USP16-202ENST00000399973 CEP350Q5VT06 3117 aa10.57□□□□□ -0.72
USP16-202ENST00000399973 ECM29Q5VYK3 1845 aa10.57□□□□□ -0.72
USP16-202ENST00000399973 H7C1D1 291 aa10.57□□□□□ -0.72
USP16-202ENST00000399973 UBTFL1P0CB47 393 aaPredicted RBP10.57□□□□□ -0.72
USP16-202ENST00000399973 TBC1D10BQ4KMP7 808 aaPredicted RBP10.57□□□□□ -0.72
USP16-202ENST00000399973 ANKRD44Q8N8A2 993 aa10.57□□□□□ -0.72
USP16-202ENST00000399973 KAZALD1Q96I82 304 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms