RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 ZC3H12CQ9C0D7 883 aaKnown RBP15.48■□□□□ 0.07
SYNE4-203ENST00000397428 TSKSQ9UJT2 592 aa15.48■□□□□ 0.07
SYNE4-203ENST00000397428 RTL9Q8NET4 1388 aa15.48■□□□□ 0.07
SYNE4-203ENST00000397428 NOGQ13253 232 aa15.47■□□□□ 0.07
SYNE4-203ENST00000397428 TBC1D10BQ4KMP7 808 aaPredicted RBP15.47■□□□□ 0.07
SYNE4-203ENST00000397428 CCDC191Q8NCU4 936 aa15.47■□□□□ 0.07
SYNE4-203ENST00000397428 ZIC5Q96T25 663 aa15.47■□□□□ 0.07
SYNE4-203ENST00000397428 SEC31BQ9NQW1 1179 aa15.47■□□□□ 0.07
SYNE4-203ENST00000397428 IFT57Q9NWB7 429 aa15.47■□□□□ 0.07
SYNE4-203ENST00000397428 POLR2AP24928 1970 aaKnown RBP15.46■□□□□ 0.07
SYNE4-203ENST00000397428 FAM155AB1AL88 458 aaPredicted RBP15.46■□□□□ 0.07
SYNE4-203ENST00000397428 APAF1O14727 1248 aa15.46■□□□□ 0.07
SYNE4-203ENST00000397428 PCCAP05165 728 aaPredicted RBP15.46■□□□□ 0.07
SYNE4-203ENST00000397428 HUNKP57058 714 aa15.46■□□□□ 0.07
SYNE4-203ENST00000397428 GNAI1P63096 354 aa15.46■□□□□ 0.07
SYNE4-203ENST00000397428 RBM26Q5T8P6 1007 aaKnown RBP15.46■□□□□ 0.07
SYNE4-203ENST00000397428 KRT26Q7Z3Y9 468 aa15.46■□□□□ 0.07
SYNE4-203ENST00000397428 C8orf58Q8NAV2 365 aa15.46■□□□□ 0.07
SYNE4-203ENST00000397428 DCPSQ96C86 337 aaKnown RBP15.46■□□□□ 0.07
SYNE4-203ENST00000397428 PRKRIP1Q9H875 184 aaPredicted RBP15.46■□□□□ 0.07
SYNE4-203ENST00000397428 ELL2O00472 640 aaPredicted RBP15.45■□□□□ 0.06
SYNE4-203ENST00000397428 PDE8AO60658 829 aa15.45■□□□□ 0.06
SYNE4-203ENST00000397428 CALD1Q05682 793 aaKnown RBP15.45■□□□□ 0.06
SYNE4-203ENST00000397428 GOLGA2Q08379 1002 aa15.45■□□□□ 0.06
SYNE4-203ENST00000397428 RGMBQ6NW40 437 aa15.45■□□□□ 0.06
SYNE4-203ENST00000397428 C2orf69Q8N8R5 385 aa15.45■□□□□ 0.06
SYNE4-203ENST00000397428 CCDC102AQ96A19 550 aa15.45■□□□□ 0.06
SYNE4-203ENST00000397428 MYD88Q99836 296 aa15.45■□□□□ 0.06
SYNE4-203ENST00000397428 CCDC85CA6NKD9 419 aa15.44■□□□□ 0.06
SYNE4-203ENST00000397428 ZNF280AP59817 542 aaPredicted RBP15.44■□□□□ 0.06
SYNE4-203ENST00000397428 GMLQ99445 158 aa15.44■□□□□ 0.06
SYNE4-203ENST00000397428 METTL22Q9BUU2 404 aaPredicted RBP15.44■□□□□ 0.06
SYNE4-203ENST00000397428 CHMP4AQ9BY43 222 aa15.44■□□□□ 0.06
SYNE4-203ENST00000397428 GBA2Q9HCG7 927 aaPredicted RBP15.44■□□□□ 0.06
SYNE4-203ENST00000397428 ADM5C9JUS6 153 aa15.43■□□□□ 0.06
SYNE4-203ENST00000397428 CCDC152Q4G0S7 254 aa15.43■□□□□ 0.06
SYNE4-203ENST00000397428 AGBL3Q8NEM8 1001 aa15.43■□□□□ 0.06
SYNE4-203ENST00000397428 JARID2Q92833 1246 aaPredicted RBP15.43■□□□□ 0.06
SYNE4-203ENST00000397428 CWC25Q9NXE8 425 aaPredicted RBP15.43■□□□□ 0.06
SYNE4-203ENST00000397428 ANKIB1Q9P2G1 1089 aa15.43■□□□□ 0.06
SYNE4-203ENST00000397428 GGA1Q9UJY5 639 aa15.43■□□□□ 0.06
SYNE4-203ENST00000397428 UFL1O94874 794 aa15.42■□□□□ 0.06
SYNE4-203ENST00000397428 KIF4BQ2VIQ3 1234 aa15.42■□□□□ 0.06
SYNE4-203ENST00000397428 CCDC30Q5VVM6 783 aa15.42■□□□□ 0.06
SYNE4-203ENST00000397428 MCOLN1Q9GZU1 580 aa15.42■□□□□ 0.06
SYNE4-203ENST00000397428 ZNF609O15014 1411 aa15.42■□□□□ 0.06
SYNE4-203ENST00000397428 SCN9AQ15858 1988 aa15.42■□□□□ 0.06
SYNE4-203ENST00000397428 G3V3G9 751 aa15.41■□□□□ 0.06
SYNE4-203ENST00000397428 DDX58O95786 925 aaKnown RBP15.41■□□□□ 0.06
SYNE4-203ENST00000397428 KIF23Q02241 960 aaPredicted RBP15.41■□□□□ 0.06
SYNE4-203ENST00000397428 FAM161AQ3B820 660 aa15.41■□□□□ 0.06
SYNE4-203ENST00000397428 DCAF8Q5TAQ9 597 aa15.41■□□□□ 0.06
SYNE4-203ENST00000397428 RSBN1LQ6PCB5 846 aaPredicted RBP15.41■□□□□ 0.06
SYNE4-203ENST00000397428 PODNQ7Z5L7 613 aa15.41■□□□□ 0.06
SYNE4-203ENST00000397428 ASTN2O75129 1339 aaPredicted RBP15.41■□□□□ 0.06
SYNE4-203ENST00000397428 CASP8AP2Q9UKL3 1982 aa15.4■□□□□ 0.06
SYNE4-203ENST00000397428 WTIPA6NIX2 430 aaPredicted RBP15.4■□□□□ 0.06
SYNE4-203ENST00000397428 ATP2B4P23634 1241 aa15.4■□□□□ 0.06
SYNE4-203ENST00000397428 ZNF157P51786 506 aaPredicted RBP15.4■□□□□ 0.06
SYNE4-203ENST00000397428 MLLT1Q03111 559 aaPredicted RBP15.4■□□□□ 0.06
SYNE4-203ENST00000397428 SCARF1Q14162 830 aa15.4■□□□□ 0.06
SYNE4-203ENST00000397428 KSR2Q6VAB6 950 aa15.4■□□□□ 0.06
SYNE4-203ENST00000397428 ANKRD18AQ8IVF6 992 aa15.4■□□□□ 0.06
SYNE4-203ENST00000397428 SULF1Q8IWU6 871 aa15.4■□□□□ 0.06
SYNE4-203ENST00000397428 TSPYL6Q8N831 410 aa15.4■□□□□ 0.06
SYNE4-203ENST00000397428 TTLL11Q8NHH1 800 aa15.4■□□□□ 0.06
SYNE4-203ENST00000397428 SAGE1Q9NXZ1 904 aa15.4■□□□□ 0.06
SYNE4-203ENST00000397428 MAP3K2Q9Y2U5 619 aa15.4■□□□□ 0.06
SYNE4-203ENST00000397428 XDHP47989 1333 aa15.4■□□□□ 0.06
SYNE4-203ENST00000397428 IGKV5-2P06315 115 aa15.39■□□□□ 0.05
SYNE4-203ENST00000397428 USP17L8P0C7I0 530 aa15.39■□□□□ 0.05
SYNE4-203ENST00000397428 DGKZQ13574 1117 aa15.39■□□□□ 0.05
SYNE4-203ENST00000397428 CDCA5Q96FF9 252 aa15.39■□□□□ 0.05
SYNE4-203ENST00000397428 CCDC85AQ96PX6 553 aaPredicted RBP15.39■□□□□ 0.05
SYNE4-203ENST00000397428 CSRNP1Q96S65 589 aa15.39■□□□□ 0.05
SYNE4-203ENST00000397428 PI4KAP2A4QPH2 592 aa15.38■□□□□ 0.05
SYNE4-203ENST00000397428 USP17L3A6NCW0 530 aa15.38■□□□□ 0.05
SYNE4-203ENST00000397428 USP17L4A6NCW7 530 aa15.38■□□□□ 0.05
SYNE4-203ENST00000397428 H7C1W4 665 aa15.38■□□□□ 0.05
SYNE4-203ENST00000397428 USP17L1Q7RTZ2 530 aa15.38■□□□□ 0.05
SYNE4-203ENST00000397428 REM2Q8IYK8 340 aaPredicted RBP15.38■□□□□ 0.05
SYNE4-203ENST00000397428 PI4KAP1Q8N8J0 262 aa15.38■□□□□ 0.05
SYNE4-203ENST00000397428 BSDC1Q9NW68 430 aaPredicted RBP15.38■□□□□ 0.05
SYNE4-203ENST00000397428 RNF186Q9NXI6 227 aa15.38■□□□□ 0.05
SYNE4-203ENST00000397428 GGA3Q9NZ52 723 aa15.38■□□□□ 0.05
SYNE4-203ENST00000397428 MINPP1Q9UNW1 487 aa15.38■□□□□ 0.05
SYNE4-203ENST00000397428 SLC10A3P09131 477 aa15.37■□□□□ 0.05
SYNE4-203ENST00000397428 CTSWP56202 376 aa15.37■□□□□ 0.05
SYNE4-203ENST00000397428 ANGEL2Q5VTE6 544 aaKnown RBP15.37■□□□□ 0.05
SYNE4-203ENST00000397428 CDC5LQ99459 802 aaKnown RBP15.37■□□□□ 0.05
SYNE4-203ENST00000397428 MYOZ2Q9NPC6 264 aa15.37■□□□□ 0.05
SYNE4-203ENST00000397428 PITPNM2Q9BZ72 1349 aa15.37■□□□□ 0.05
SYNE4-203ENST00000397428 TRPA1O75762 1119 aa15.36■□□□□ 0.05
SYNE4-203ENST00000397428 FKBP1BP68106 108 aa15.36■□□□□ 0.05
SYNE4-203ENST00000397428 PSME4Q14997 1843 aa15.36■□□□□ 0.05
SYNE4-203ENST00000397428 CCDC27Q2M243 656 aa15.35■□□□□ 0.05
SYNE4-203ENST00000397428 DACT2Q5SW24 774 aa15.35■□□□□ 0.05
SYNE4-203ENST00000397428 GREM2Q9H772 168 aa15.35■□□□□ 0.05
SYNE4-203ENST00000397428 TNRC18O15417 2968 aaPredicted RBP15.34■□□□□ 0.05
SYNE4-203ENST00000397428 NEURL1BA8MQ27 555 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms