RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 CDCA5Q96FF9 252 aa11.11□□□□□ -0.63
SCFD1-202ENST00000396629 GGA3Q9NZ52 723 aa11.11□□□□□ -0.63
SCFD1-202ENST00000396629 TSPYL4Q9UJ04 414 aa11.11□□□□□ -0.63
SCFD1-202ENST00000396629 NSFL1CQ9UNZ2 370 aaKnown RBP11.11□□□□□ -0.63
SCFD1-202ENST00000396629 ZNF609O15014 1411 aa11.11□□□□□ -0.63
SCFD1-202ENST00000396629 GPSM2P81274 684 aa11.11□□□□□ -0.63
SCFD1-202ENST00000396629 XAGE3Q8WTP9 111 aa11.11□□□□□ -0.63
SCFD1-202ENST00000396629 CELF1Q92879 486 aaKnown RBP11.11□□□□□ -0.63
SCFD1-202ENST00000396629 EYA3Q99504 573 aa11.11□□□□□ -0.63
SCFD1-202ENST00000396629 BABAM1Q9NWV8 329 aa11.11□□□□□ -0.63
SCFD1-202ENST00000396629 C6orf229H3BNL8 230 aa11.1□□□□□ -0.63
SCFD1-202ENST00000396629 FKBP1BP68106 108 aa11.1□□□□□ -0.63
SCFD1-202ENST00000396629 DOK7Q18PE1 504 aa11.1□□□□□ -0.63
SCFD1-202ENST00000396629 ASTN2O75129 1339 aaPredicted RBP11.1□□□□□ -0.63
SCFD1-202ENST00000396629 ZNF280AP59817 542 aaPredicted RBP11.09□□□□□ -0.63
SCFD1-202ENST00000396629 AIMP1Q12904 312 aaKnown RBP11.09□□□□□ -0.63
SCFD1-202ENST00000396629 NOM1Q5C9Z4 860 aaKnown RBP11.09□□□□□ -0.63
SCFD1-202ENST00000396629 TBC1D16Q8TBP0 767 aa11.09□□□□□ -0.63
SCFD1-202ENST00000396629 MAPK8IP2Q13387 824 aaPredicted RBP11.08□□□□□ -0.64
SCFD1-202ENST00000396629 ZNF296Q8WUU4 475 aaPredicted RBP11.08□□□□□ -0.64
SCFD1-202ENST00000396629 GCC1Q96CN9 775 aa11.08□□□□□ -0.64
SCFD1-202ENST00000396629 ISCA1Q9BUE6 129 aa11.08□□□□□ -0.64
SCFD1-202ENST00000396629 PNNQ9H307 717 aaKnown RBP11.08□□□□□ -0.64
SCFD1-202ENST00000396629 HDAC9Q9UKV0 1011 aa11.08□□□□□ -0.64
SCFD1-202ENST00000396629 PITPNM2Q9BZ72 1349 aa11.08□□□□□ -0.64
SCFD1-202ENST00000396629 TM4SF4P48230 202 aa11.08□□□□□ -0.64
SCFD1-202ENST00000396629 SCARF1Q14162 830 aa11.08□□□□□ -0.64
SCFD1-202ENST00000396629 ANGEL2Q5VTE6 544 aaKnown RBP11.08□□□□□ -0.64
SCFD1-202ENST00000396629 AGBL3Q8NEM8 1001 aa11.08□□□□□ -0.64
SCFD1-202ENST00000396629 PODXL2Q9NZ53 605 aa11.08□□□□□ -0.64
SCFD1-202ENST00000396629 TBC1D8O95759 1140 aa11.07□□□□□ -0.64
SCFD1-202ENST00000396629 RSBN1LQ6PCB5 846 aaPredicted RBP11.07□□□□□ -0.64
SCFD1-202ENST00000396629 FBXO46Q6PJ61 603 aaPredicted RBP11.07□□□□□ -0.64
SCFD1-202ENST00000396629 CNKSR2Q8WXI2 1034 aa11.07□□□□□ -0.64
SCFD1-202ENST00000396629 NECTIN2Q92692 538 aa11.07□□□□□ -0.64
SCFD1-202ENST00000396629 FAM89AQ96GI7 184 aa11.07□□□□□ -0.64
SCFD1-202ENST00000396629 ZC3H12CQ9C0D7 883 aaKnown RBP11.07□□□□□ -0.64
SCFD1-202ENST00000396629 MAPK8IP3Q9UPT6 1336 aa11.06□□□□□ -0.64
SCFD1-202ENST00000396629 RPS8P62241 208 aaKnown RBP11.06□□□□□ -0.64
SCFD1-202ENST00000396629 PLBD2Q8NHP8 589 aa11.06□□□□□ -0.64
SCFD1-202ENST00000396629 GMLQ99445 158 aa11.06□□□□□ -0.64
SCFD1-202ENST00000396629 GPR25O00155 361 aa11.06□□□□□ -0.64
SCFD1-202ENST00000396629 CFHR5Q9BXR6 569 aa11.06□□□□□ -0.64
SCFD1-202ENST00000396629 ZNF646O15015 1829 aaPredicted RBP11.05□□□□□ -0.64
SCFD1-202ENST00000396629 UBE2Q2LH0YL09 131 aa11.05□□□□□ -0.64
SCFD1-202ENST00000396629 MOB2Q70IA6 237 aa11.05□□□□□ -0.64
SCFD1-202ENST00000396629 ZNF428Q96B54 188 aa11.05□□□□□ -0.64
SCFD1-202ENST00000396629 RBBP6Q7Z6E9 1792 aaKnown RBP11.04□□□□□ -0.64
SCFD1-202ENST00000396629 RIPK4P57078 832 aa11.04□□□□□ -0.64
SCFD1-202ENST00000396629 TRIM28Q13263 835 aaKnown RBP11.04□□□□□ -0.64
SCFD1-202ENST00000396629 ANKRD13DQ6ZTN6 518 aa11.04□□□□□ -0.64
SCFD1-202ENST00000396629 MYOZ2Q9NPC6 264 aa11.04□□□□□ -0.64
SCFD1-202ENST00000396629 ATP5J2-PTCD1G3V325 749 aa11.04□□□□□ -0.64
SCFD1-202ENST00000396629 G3V3G9 751 aa11.04□□□□□ -0.64
SCFD1-202ENST00000396629 IRS4O14654 1257 aaPredicted RBP11.04□□□□□ -0.64
SCFD1-202ENST00000396629 UFL1O94874 794 aa11.04□□□□□ -0.64
SCFD1-202ENST00000396629 USP17L8P0C7I0 530 aa11.04□□□□□ -0.64
SCFD1-202ENST00000396629 DCAF8Q5TAQ9 597 aa11.04□□□□□ -0.64
SCFD1-202ENST00000396629 CHPF2Q9P2E5 772 aa11.04□□□□□ -0.64
SCFD1-202ENST00000396629 GGA1Q9UJY5 639 aa11.04□□□□□ -0.64
SCFD1-202ENST00000396629 FKTNO75072 461 aa11.03□□□□□ -0.64
SCFD1-202ENST00000396629 HABP4Q5JVS0 413 aaKnown RBP11.03□□□□□ -0.64
SCFD1-202ENST00000396629 LAMB1P07942 1786 aa11.03□□□□□ -0.64
SCFD1-202ENST00000396629 KRT24Q2M2I5 525 aa11.02□□□□□ -0.64
SCFD1-202ENST00000396629 SEC31BQ9NQW1 1179 aa11.02□□□□□ -0.64
SCFD1-202ENST00000396629 ANKIB1Q9P2G1 1089 aa11.02□□□□□ -0.64
SCFD1-202ENST00000396629 USP17L3A6NCW0 530 aa11.02□□□□□ -0.65
SCFD1-202ENST00000396629 USP17L4A6NCW7 530 aa11.02□□□□□ -0.65
SCFD1-202ENST00000396629 CHL1O00533 1208 aa11.02□□□□□ -0.65
SCFD1-202ENST00000396629 TMPOP42166 694 aaKnown RBP11.02□□□□□ -0.65
SCFD1-202ENST00000396629 LMOD3Q0VAK6 560 aa11.02□□□□□ -0.65
SCFD1-202ENST00000396629 SREBF2Q12772 1141 aa11.02□□□□□ -0.65
SCFD1-202ENST00000396629 PRAMEF18Q5VWM3 479 aa11.02□□□□□ -0.65
SCFD1-202ENST00000396629 USP17L1Q7RTZ2 530 aa11.02□□□□□ -0.65
SCFD1-202ENST00000396629 R3HDMLQ9H3Y0 253 aa11.02□□□□□ -0.65
SCFD1-202ENST00000396629 SCAF8Q9UPN6 1271 aaKnown RBP11.02□□□□□ -0.65
SCFD1-202ENST00000396629 RTL5Q5HYW3 569 aaPredicted RBP11.01□□□□□ -0.65
SCFD1-202ENST00000396629 PODNQ7Z5L7 613 aa11.01□□□□□ -0.65
SCFD1-202ENST00000396629 HOXB7P09629 217 aa11.01□□□□□ -0.65
SCFD1-202ENST00000396629 NBPF9Q3BBW0 867 aa11.01□□□□□ -0.65
SCFD1-202ENST00000396629 HDGFL1Q5TGJ6 251 aa11.01□□□□□ -0.65
SCFD1-202ENST00000396629 ZBTB38Q8NAP3 1195 aaPredicted RBP11.01□□□□□ -0.65
SCFD1-202ENST00000396629 DBF4Q9UBU7 674 aaPredicted RBP11.01□□□□□ -0.65
SCFD1-202ENST00000396629 HSP90B1P14625 803 aaKnown RBP11□□□□□ -0.65
SCFD1-202ENST00000396629 ATP2B4P23634 1241 aa11□□□□□ -0.65
SCFD1-202ENST00000396629 PTPN12Q05209 780 aaKnown RBP11□□□□□ -0.65
SCFD1-202ENST00000396629 TTLL12Q14166 644 aaPredicted RBP11□□□□□ -0.65
SCFD1-202ENST00000396629 HYPKQ9NX55 129 aa11□□□□□ -0.65
SCFD1-202ENST00000396629 XDHP47989 1333 aa11□□□□□ -0.65
SCFD1-202ENST00000396629 NF2P35240 595 aa10.99□□□□□ -0.65
SCFD1-202ENST00000396629 MKRN3Q13064 507 aaKnown RBP10.99□□□□□ -0.65
SCFD1-202ENST00000396629 LDLRAD1Q5T700 205 aa10.99□□□□□ -0.65
SCFD1-202ENST00000396629 INTS3Q68E01 1043 aaKnown RBP10.99□□□□□ -0.65
SCFD1-202ENST00000396629 SPEF2Q9C093 1822 aa10.99□□□□□ -0.65
SCFD1-202ENST00000396629 POTEFA5A3E0 1075 aa10.99□□□□□ -0.65
SCFD1-202ENST00000396629 WNT10BO00744 389 aa10.99□□□□□ -0.65
SCFD1-202ENST00000396629 ALDH1A1P00352 501 aa10.99□□□□□ -0.65
SCFD1-202ENST00000396629 MMP14P50281 582 aa10.99□□□□□ -0.65
SCFD1-202ENST00000396629 CCDC152Q4G0S7 254 aa10.99□□□□□ -0.65
SCFD1-202ENST00000396629 SPRYD7Q5W111 196 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms