RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 CCDC136Q96JN2 1154 aa10.59□□□□□ -0.71
HERC4-203ENST00000395185 RASSF7Q02833 373 aa10.58□□□□□ -0.72
HERC4-203ENST00000395185 GRAPQ13588 217 aa10.58□□□□□ -0.72
HERC4-203ENST00000395185 SP8Q8IXZ3 490 aa10.58□□□□□ -0.72
HERC4-203ENST00000395185 SMC5Q8IY18 1101 aa10.58□□□□□ -0.72
HERC4-203ENST00000395185 GRAPLQ8TC17 118 aaPredicted RBP10.58□□□□□ -0.72
HERC4-203ENST00000395185 JDP2Q8WYK2 163 aa10.58□□□□□ -0.72
HERC4-203ENST00000395185 PLA2G12BQ9BX93 195 aa10.58□□□□□ -0.72
HERC4-203ENST00000395185 HDAC5Q9UQL6 1122 aa10.58□□□□□ -0.72
HERC4-203ENST00000395185 ATP6V0A2Q9Y487 856 aa10.58□□□□□ -0.72
HERC4-203ENST00000395185 LTBP3Q9NS15 1303 aa10.58□□□□□ -0.72
HERC4-203ENST00000395185 ABCC12Q96J65 1359 aa10.57□□□□□ -0.72
HERC4-203ENST00000395185 NFKBIEO00221 500 aa10.57□□□□□ -0.72
HERC4-203ENST00000395185 UBTFL1P0CB47 393 aaPredicted RBP10.57□□□□□ -0.72
HERC4-203ENST00000395185 RPS8P62241 208 aaKnown RBP10.57□□□□□ -0.72
HERC4-203ENST00000395185 RABL6Q3YEC7 729 aaPredicted RBP10.57□□□□□ -0.72
HERC4-203ENST00000395185 C3orf67Q6ZVT6 689 aa10.57□□□□□ -0.72
HERC4-203ENST00000395185 RASEFQ8IZ41 740 aa10.57□□□□□ -0.72
HERC4-203ENST00000395185 SSH3Q8TE77 659 aa10.57□□□□□ -0.72
HERC4-203ENST00000395185 PSMD1Q99460 953 aa10.57□□□□□ -0.72
HERC4-203ENST00000395185 VPS33BQ9H267 617 aa10.57□□□□□ -0.72
HERC4-203ENST00000395185 RWDD1Q9H446 243 aaPredicted RBP10.57□□□□□ -0.72
HERC4-203ENST00000395185 DCTPP1Q9H773 170 aa10.57□□□□□ -0.72
HERC4-203ENST00000395185 C9orf78Q9NZ63 289 aaPredicted RBP10.57□□□□□ -0.72
HERC4-203ENST00000395185 GLTPD2A6NH11 291 aa10.56□□□□□ -0.72
HERC4-203ENST00000395185 EPHA10Q5JZY3 1008 aa10.56□□□□□ -0.72
HERC4-203ENST00000395185 DPP8Q6V1X1 898 aaPredicted RBP10.56□□□□□ -0.72
HERC4-203ENST00000395185 CENPQQ7L2Z9 268 aaPredicted RBP10.56□□□□□ -0.72
HERC4-203ENST00000395185 MPNDQ8N594 471 aa10.56□□□□□ -0.72
HERC4-203ENST00000395185 ZNF579Q8NAF0 562 aaKnown RBP10.56□□□□□ -0.72
HERC4-203ENST00000395185 SUCLG2Q96I99 432 aa10.56□□□□□ -0.72
HERC4-203ENST00000395185 C1orf115Q9H7X2 142 aa10.56□□□□□ -0.72
HERC4-203ENST00000395185 LRRFIP2Q9Y608 721 aaKnown RBP10.56□□□□□ -0.72
HERC4-203ENST00000395185 N4BP2Q86UW6 1770 aaPredicted RBP10.56□□□□□ -0.72
HERC4-203ENST00000395185 RIC1Q4ADV7 1423 aa10.56□□□□□ -0.72
HERC4-203ENST00000395185 CDHR2Q9BYE9 1310 aa10.56□□□□□ -0.72
HERC4-203ENST00000395185 CSF1RP07333 972 aa10.55□□□□□ -0.72
HERC4-203ENST00000395185 VEGFAP15692 232 aaPredicted RBP10.55□□□□□ -0.72
HERC4-203ENST00000395185 IARSP41252 1262 aaKnown RBP10.55□□□□□ -0.72
HERC4-203ENST00000395185 FOXO4P98177 505 aa10.55□□□□□ -0.72
HERC4-203ENST00000395185 SPOCK2Q92563 424 aa10.55□□□□□ -0.72
HERC4-203ENST00000395185 JARID2Q92833 1246 aaPredicted RBP10.55□□□□□ -0.72
HERC4-203ENST00000395185 FAM212AQ96EL1 285 aa10.55□□□□□ -0.72
HERC4-203ENST00000395185 CDC5LQ99459 802 aaKnown RBP10.55□□□□□ -0.72
HERC4-203ENST00000395185 RRAGCQ9HB90 399 aa10.55□□□□□ -0.72
HERC4-203ENST00000395185 ZNF277Q9NRM2 450 aaPredicted RBP10.55□□□□□ -0.72
HERC4-203ENST00000395185 NOP58Q9Y2X3 529 aaKnown RBP10.55□□□□□ -0.72
HERC4-203ENST00000395185 PNMA6EA0A0J9YXQ4 647 aa10.54□□□□□ -0.72
HERC4-203ENST00000395185 EIF6P56537 245 aaKnown RBP10.54□□□□□ -0.72
HERC4-203ENST00000395185 C1QTNF8P60827 252 aa10.54□□□□□ -0.72
HERC4-203ENST00000395185 OLFM4Q6UX06 510 aa10.54□□□□□ -0.72
HERC4-203ENST00000395185 UBE3BQ7Z3V4 1068 aa10.54□□□□□ -0.72
HERC4-203ENST00000395185 ANKRD18AQ8IVF6 992 aa10.54□□□□□ -0.72
HERC4-203ENST00000395185 LARGE2Q8N3Y3 721 aa10.54□□□□□ -0.72
HERC4-203ENST00000395185 NSFL1CQ9UNZ2 370 aaKnown RBP10.54□□□□□ -0.72
HERC4-203ENST00000395185 G3V3G9 751 aa10.53□□□□□ -0.72
HERC4-203ENST00000395185 C6orf229H3BNL8 230 aa10.53□□□□□ -0.72
HERC4-203ENST00000395185 PPIP5K2O43314 1243 aa10.53□□□□□ -0.72
HERC4-203ENST00000395185 TOMM70O94826 608 aa10.53□□□□□ -0.72
HERC4-203ENST00000395185 RFX5P48382 616 aaPredicted RBP10.53□□□□□ -0.72
HERC4-203ENST00000395185 CTSWP56202 376 aa10.53□□□□□ -0.72
HERC4-203ENST00000395185 DCAF8Q5TAQ9 597 aa10.53□□□□□ -0.72
HERC4-203ENST00000395185 NIM1KQ8IY84 436 aa10.53□□□□□ -0.72
HERC4-203ENST00000395185 GCC1Q96CN9 775 aa10.53□□□□□ -0.72
HERC4-203ENST00000395185 EYA3Q99504 573 aa10.53□□□□□ -0.72
HERC4-203ENST00000395185 ANKIB1Q9P2G1 1089 aa10.53□□□□□ -0.72
HERC4-203ENST00000395185 SCN7AQ01118 1682 aa10.53□□□□□ -0.72
HERC4-203ENST00000395185 GOLGB1Q14789 3259 aaKnown RBP10.52□□□□□ -0.72
HERC4-203ENST00000395185 IQCA1LA6NCM1 817 aa10.52□□□□□ -0.73
HERC4-203ENST00000395185 HMMRO75330 724 aa10.52□□□□□ -0.73
HERC4-203ENST00000395185 GABBR2O75899 941 aa10.52□□□□□ -0.73
HERC4-203ENST00000395185 IGHMBP2P38935 993 aaKnown RBP10.52□□□□□ -0.73
HERC4-203ENST00000395185 TTLL11Q8NHH1 800 aa10.52□□□□□ -0.73
HERC4-203ENST00000395185 CELF1Q92879 486 aaKnown RBP10.52□□□□□ -0.73
HERC4-203ENST00000395185 CCDC85AQ96PX6 553 aaPredicted RBP10.52□□□□□ -0.73
HERC4-203ENST00000395185 MPHOSPH8Q99549 860 aa10.52□□□□□ -0.73
HERC4-203ENST00000395185 RTFDC1Q9BY42 306 aaPredicted RBP10.52□□□□□ -0.73
HERC4-203ENST00000395185 ZC3H12CQ9C0D7 883 aaKnown RBP10.52□□□□□ -0.73
HERC4-203ENST00000395185 BICC1Q9H694 974 aaKnown RBP10.52□□□□□ -0.73
HERC4-203ENST00000395185 COPRSQ9NQ92 184 aa10.52□□□□□ -0.73
HERC4-203ENST00000395185 NRXN2Q9P2S2 1712 aa10.52□□□□□ -0.73
HERC4-203ENST00000395185 ARFGEF2Q9Y6D5 1785 aa10.52□□□□□ -0.73
HERC4-203ENST00000395185 KIF13BQ9NQT8 1826 aa10.51□□□□□ -0.73
HERC4-203ENST00000395185 UTRNP46939 3433 aa10.51□□□□□ -0.73
HERC4-203ENST00000395185 ANKRD18BA2A2Z9 1011 aa10.51□□□□□ -0.73
HERC4-203ENST00000395185 PRELPP51888 382 aa10.51□□□□□ -0.73
HERC4-203ENST00000395185 NUCB1Q02818 461 aa10.51□□□□□ -0.73
HERC4-203ENST00000395185 IFIT5Q13325 482 aaKnown RBP10.51□□□□□ -0.73
HERC4-203ENST00000395185 WASHC4Q2M389 1173 aa10.51□□□□□ -0.73
HERC4-203ENST00000395185 TAF7LQ5H9L4 462 aa10.51□□□□□ -0.73
HERC4-203ENST00000395185 NMRK2Q9NPI5 230 aa10.51□□□□□ -0.73
HERC4-203ENST00000395185 SEC31BQ9NQW1 1179 aa10.51□□□□□ -0.73
HERC4-203ENST00000395185 CHMP3Q9Y3E7 222 aa10.51□□□□□ -0.73
HERC4-203ENST00000395185 FZD9O00144 591 aa10.5□□□□□ -0.73
HERC4-203ENST00000395185 KIF3CO14782 793 aa10.5□□□□□ -0.73
HERC4-203ENST00000395185 DDNO94850 711 aaPredicted RBP10.5□□□□□ -0.73
HERC4-203ENST00000395185 ATP2B4P23634 1241 aa10.5□□□□□ -0.73
HERC4-203ENST00000395185 TNIP1Q15025 636 aa10.5□□□□□ -0.73
HERC4-203ENST00000395185 CCDC57Q2TAC2 916 aa10.5□□□□□ -0.73
HERC4-203ENST00000395185 BSDC1Q9NW68 430 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 241.4 ms