RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 RASSF10A6NK89 507 aa11.37□□□□□ -0.59
ATG4A-205ENST00000394892 RIMBP2O15034 1052 aa11.37□□□□□ -0.59
ATG4A-205ENST00000394892 ECE1P42892 770 aa11.37□□□□□ -0.59
ATG4A-205ENST00000394892 LBX1P52954 281 aa11.37□□□□□ -0.59
ATG4A-205ENST00000394892 CTSWP56202 376 aa11.37□□□□□ -0.59
ATG4A-205ENST00000394892 GCKRQ14397 625 aa11.37□□□□□ -0.59
ATG4A-205ENST00000394892 DOK7Q18PE1 504 aa11.37□□□□□ -0.59
ATG4A-205ENST00000394892 SUPT20HQ8NEM7 779 aa11.37□□□□□ -0.59
ATG4A-205ENST00000394892 GREM2Q9H772 168 aa11.37□□□□□ -0.59
ATG4A-205ENST00000394892 DBNDD1Q9H9R9 158 aa11.37□□□□□ -0.59
ATG4A-205ENST00000394892 PODXL2Q9NZ53 605 aa11.37□□□□□ -0.59
ATG4A-205ENST00000394892 GPRC5DQ9NZD1 345 aa11.37□□□□□ -0.59
ATG4A-205ENST00000394892 LRRC37AA6NMS7 1700 aa11.37□□□□□ -0.59
ATG4A-205ENST00000394892 SCN4AP35499 1836 aa11.37□□□□□ -0.59
ATG4A-205ENST00000394892 WDR33Q9C0J8 1336 aaKnown RBP11.36□□□□□ -0.59
ATG4A-205ENST00000394892 EGFRP00533 1210 aa11.36□□□□□ -0.59
ATG4A-205ENST00000394892 CCDC152Q4G0S7 254 aa11.36□□□□□ -0.59
ATG4A-205ENST00000394892 BEND3Q5T5X7 828 aa11.36□□□□□ -0.59
ATG4A-205ENST00000394892 CIAPIN1Q6FI81 312 aa11.36□□□□□ -0.59
ATG4A-205ENST00000394892 PAXIP1Q6ZW49 1069 aaPredicted RBP11.36□□□□□ -0.59
ATG4A-205ENST00000394892 UBE3BQ7Z3V4 1068 aa11.36□□□□□ -0.59
ATG4A-205ENST00000394892 TRPM4Q8TD43 1214 aa11.36□□□□□ -0.59
ATG4A-205ENST00000394892 DNAAF4Q8WXU2 420 aa11.36□□□□□ -0.59
ATG4A-205ENST00000394892 ZBTB12Q9Y330 459 aaPredicted RBP11.36□□□□□ -0.59
ATG4A-205ENST00000394892 TRAF5O00463 557 aa11.35□□□□□ -0.59
ATG4A-205ENST00000394892 PSMD14O00487 310 aa11.35□□□□□ -0.59
ATG4A-205ENST00000394892 FKBP5Q13451 457 aaPredicted RBP11.35□□□□□ -0.59
ATG4A-205ENST00000394892 WASHC4Q2M389 1173 aa11.35□□□□□ -0.59
ATG4A-205ENST00000394892 EPHA10Q5JZY3 1008 aa11.35□□□□□ -0.59
ATG4A-205ENST00000394892 DLK2Q6UY11 383 aa11.35□□□□□ -0.59
ATG4A-205ENST00000394892 PLA2G12BQ9BX93 195 aa11.35□□□□□ -0.59
ATG4A-205ENST00000394892 CHMP4AQ9BY43 222 aa11.35□□□□□ -0.59
ATG4A-205ENST00000394892 C6orf229H3BNL8 230 aa11.34□□□□□ -0.59
ATG4A-205ENST00000394892 ECE2O60344 883 aa11.34□□□□□ -0.59
ATG4A-205ENST00000394892 CSF1RP07333 972 aa11.34□□□□□ -0.59
ATG4A-205ENST00000394892 CST9Q5W186 159 aa11.34□□□□□ -0.59
ATG4A-205ENST00000394892 LINS1Q8NG48 757 aa11.34□□□□□ -0.59
ATG4A-205ENST00000394892 PGAP2Q9UHJ9 254 aa11.34□□□□□ -0.59
ATG4A-205ENST00000394892 MINPP1Q9UNW1 487 aa11.34□□□□□ -0.59
ATG4A-205ENST00000394892 UFL1O94874 794 aa11.33□□□□□ -0.6
ATG4A-205ENST00000394892 HSPA8P11142 646 aaKnown RBP11.33□□□□□ -0.6
ATG4A-205ENST00000394892 FOXO4P98177 505 aa11.33□□□□□ -0.6
ATG4A-205ENST00000394892 NEXNQ0ZGT2 675 aa11.33□□□□□ -0.6
ATG4A-205ENST00000394892 FAM161AQ3B820 660 aa11.33□□□□□ -0.6
ATG4A-205ENST00000394892 USP50Q70EL3 339 aaPredicted RBP11.33□□□□□ -0.6
ATG4A-205ENST00000394892 TXNRD3Q86VQ6 643 aa11.33□□□□□ -0.6
ATG4A-205ENST00000394892 CDCA7LQ96GN5 454 aa11.33□□□□□ -0.6
ATG4A-205ENST00000394892 ABHD8Q96I13 439 aa11.33□□□□□ -0.6
ATG4A-205ENST00000394892 ADARB2Q9NS39 739 aaKnown RBP11.33□□□□□ -0.6
ATG4A-205ENST00000394892 CNOT7Q9UIV1 285 aaKnown RBP11.33□□□□□ -0.6
ATG4A-205ENST00000394892 SNAP23O00161 211 aa11.32□□□□□ -0.6
ATG4A-205ENST00000394892 KLRK1P26718 216 aa11.32□□□□□ -0.6
ATG4A-205ENST00000394892 SLFN5Q08AF3 891 aa11.32□□□□□ -0.6
ATG4A-205ENST00000394892 GRM1Q13255 1194 aa11.32□□□□□ -0.6
ATG4A-205ENST00000394892 SAMD7Q7Z3H4 446 aa11.32□□□□□ -0.6
ATG4A-205ENST00000394892 ANKRD18AQ8IVF6 992 aa11.32□□□□□ -0.6
ATG4A-205ENST00000394892 MRPL50Q8N5N7 158 aaKnown RBP11.32□□□□□ -0.6
ATG4A-205ENST00000394892 KAZALD1Q96I82 304 aa11.32□□□□□ -0.6
ATG4A-205ENST00000394892 CAPNS2Q96L46 248 aa11.32□□□□□ -0.6
ATG4A-205ENST00000394892 GLIS2Q9BZE0 524 aaPredicted RBP11.32□□□□□ -0.6
ATG4A-205ENST00000394892 MYH16Q9H6N6 1097 aa11.32□□□□□ -0.6
ATG4A-205ENST00000394892 BSDC1Q9NW68 430 aaPredicted RBP11.32□□□□□ -0.6
ATG4A-205ENST00000394892 GGA1Q9UJY5 639 aa11.32□□□□□ -0.6
ATG4A-205ENST00000394892 VIL1P09327 827 aaKnown RBP11.31□□□□□ -0.6
ATG4A-205ENST00000394892 HSP90B1P14625 803 aaKnown RBP11.31□□□□□ -0.6
ATG4A-205ENST00000394892 ITGA6P23229 1130 aa11.31□□□□□ -0.6
ATG4A-205ENST00000394892 TNIP1Q15025 636 aa11.31□□□□□ -0.6
ATG4A-205ENST00000394892 MICALL2Q8IY33 904 aa11.31□□□□□ -0.6
ATG4A-205ENST00000394892 TRMT2AQ8IZ69 625 aaKnown RBP11.31□□□□□ -0.6
ATG4A-205ENST00000394892 DPF2Q92785 391 aa11.31□□□□□ -0.6
ATG4A-205ENST00000394892 GMLQ99445 158 aa11.31□□□□□ -0.6
ATG4A-205ENST00000394892 ANKIB1Q9P2G1 1089 aa11.31□□□□□ -0.6
ATG4A-205ENST00000394892 ASTN2O75129 1339 aaPredicted RBP11.31□□□□□ -0.6
ATG4A-205ENST00000394892 XDHP47989 1333 aa11.31□□□□□ -0.6
ATG4A-205ENST00000394892 IRS2Q9Y4H2 1338 aa11.31□□□□□ -0.6
ATG4A-205ENST00000394892 MAP2K2P36507 400 aa11.3□□□□□ -0.6
ATG4A-205ENST00000394892 EYA3Q99504 573 aa11.3□□□□□ -0.6
ATG4A-205ENST00000394892 MXD3Q9BW11 206 aa11.3□□□□□ -0.6
ATG4A-205ENST00000394892 BCL2L13Q9BXK5 485 aa11.3□□□□□ -0.6
ATG4A-205ENST00000394892 ZC3H12CQ9C0D7 883 aaKnown RBP11.3□□□□□ -0.6
ATG4A-205ENST00000394892 CCDC85CA6NKD9 419 aa11.29□□□□□ -0.6
ATG4A-205ENST00000394892 CA12O43570 354 aa11.29□□□□□ -0.6
ATG4A-205ENST00000394892 ATP2B4P23634 1241 aa11.29□□□□□ -0.6
ATG4A-205ENST00000394892 CCT4P50991 539 aaKnown RBP11.29□□□□□ -0.6
ATG4A-205ENST00000394892 TBC1D10BQ4KMP7 808 aaPredicted RBP11.29□□□□□ -0.6
ATG4A-205ENST00000394892 CYP4F22Q6NT55 531 aa11.29□□□□□ -0.6
ATG4A-205ENST00000394892 SSH1Q8WYL5 1049 aa11.29□□□□□ -0.6
ATG4A-205ENST00000394892 CDC5LQ99459 802 aaKnown RBP11.29□□□□□ -0.6
ATG4A-205ENST00000394892 TLL2Q9Y6L7 1015 aa11.29□□□□□ -0.6
ATG4A-205ENST00000394892 MLLT1Q03111 559 aaPredicted RBP11.28□□□□□ -0.6
ATG4A-205ENST00000394892 LMBR1LQ6UX01 489 aa11.28□□□□□ -0.6
ATG4A-205ENST00000394892 SUCLG2Q96I99 432 aa11.28□□□□□ -0.6
ATG4A-205ENST00000394892 ZNF594Q96JF6 807 aaPredicted RBP11.28□□□□□ -0.6
ATG4A-205ENST00000394892 SCN9AQ15858 1988 aa11.27□□□□□ -0.61
ATG4A-205ENST00000394892 E9PSI1 815 aa11.27□□□□□ -0.61
ATG4A-205ENST00000394892 GRM8O00222 908 aa11.27□□□□□ -0.61
ATG4A-205ENST00000394892 NBPF7P0C2Y1 421 aaPredicted RBP11.27□□□□□ -0.61
ATG4A-205ENST00000394892 RPS12P25398 132 aaKnown RBP11.27□□□□□ -0.61
ATG4A-205ENST00000394892 ZNF280AP59817 542 aaPredicted RBP11.27□□□□□ -0.61
ATG4A-205ENST00000394892 CHRNDQ07001 517 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms