RNA–Protein interactions for RNA: ENST00000381037.4

CDPF1-202, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 1 (best)

Gene CDPF1, Length 1,600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-202ENST00000381037 MPHOSPH8Q99549 860 aa25■■□□□ 1.59
CDPF1-202ENST00000381037 ZNF277Q9NRM2 450 aaPredicted RBP25■■□□□ 1.59
CDPF1-202ENST00000381037 RNF181Q9P0P0 153 aa24.99■■□□□ 1.59
CDPF1-202ENST00000381037 POLLQ9UGP5 575 aa24.99■■□□□ 1.59
CDPF1-202ENST00000381037 DDX19BQ9UMR2 479 aa24.99■■□□□ 1.59
CDPF1-202ENST00000381037 PTPN12Q05209 780 aaKnown RBP24.97■■□□□ 1.59
CDPF1-202ENST00000381037 LDHAL6AQ6ZMR3 332 aa24.97■■□□□ 1.59
CDPF1-202ENST00000381037 KLHDC4Q8TBB5 520 aa24.97■■□□□ 1.59
CDPF1-202ENST00000381037 TBC1D16Q8TBP0 767 aa24.97■■□□□ 1.59
CDPF1-202ENST00000381037 SPEF2Q9C093 1822 aa24.97■■□□□ 1.59
CDPF1-202ENST00000381037 XDHP47989 1333 aa24.97■■□□□ 1.59
CDPF1-202ENST00000381037 IARSP41252 1262 aaKnown RBP24.97■■□□□ 1.59
CDPF1-202ENST00000381037 PUS3Q9BZE2 481 aaKnown RBP24.97■■□□□ 1.59
CDPF1-202ENST00000381037 VPS33BQ9H267 617 aa24.97■■□□□ 1.59
CDPF1-202ENST00000381037 ZBTB40Q9NUA8 1239 aa24.97■■□□□ 1.59
CDPF1-202ENST00000381037 RIPOR2Q9Y4F9 1068 aa24.97■■□□□ 1.59
CDPF1-202ENST00000381037 WTIPA6NIX2 430 aaPredicted RBP24.96■■□□□ 1.59
CDPF1-202ENST00000381037 SUPT20HQ8NEM7 779 aa24.96■■□□□ 1.59
CDPF1-202ENST00000381037 CCDC88AQ3V6T2 1871 aa24.95■■□□□ 1.59
CDPF1-202ENST00000381037 CHRNDQ07001 517 aa24.95■■□□□ 1.58
CDPF1-202ENST00000381037 TAF7LQ5H9L4 462 aa24.95■■□□□ 1.58
CDPF1-202ENST00000381037 C1orf115Q9H7X2 142 aa24.95■■□□□ 1.58
CDPF1-202ENST00000381037 ANKIB1Q9P2G1 1089 aa24.95■■□□□ 1.58
CDPF1-202ENST00000381037 COL4A5P29400 1685 aa24.95■■□□□ 1.58
CDPF1-202ENST00000381037 PNMA6EA0A0J9YXQ4 647 aa24.94■■□□□ 1.58
CDPF1-202ENST00000381037 KIAA2012Q0VF49 1180 aa24.94■■□□□ 1.58
CDPF1-202ENST00000381037 LRRC24Q50LG9 513 aa24.94■■□□□ 1.58
CDPF1-202ENST00000381037 ANKRD2Q9GZV1 360 aa24.94■■□□□ 1.58
CDPF1-202ENST00000381037 COPRSQ9NQ92 184 aa24.94■■□□□ 1.58
CDPF1-202ENST00000381037 CNNM1Q9NRU3 951 aa24.94■■□□□ 1.58
CDPF1-202ENST00000381037 ZC3H4Q9UPT8 1303 aaKnown RBP24.93■■□□□ 1.58
CDPF1-202ENST00000381037 DICER1Q9UPY3 1922 aaKnown RBP24.93■■□□□ 1.58
CDPF1-202ENST00000381037 SRGAP3O43295 1099 aa24.93■■□□□ 1.58
CDPF1-202ENST00000381037 GGA1Q9UJY5 639 aa24.93■■□□□ 1.58
CDPF1-202ENST00000381037 YY1P25490 414 aa24.92■■□□□ 1.58
CDPF1-202ENST00000381037 AOC3Q16853 763 aa24.92■■□□□ 1.58
CDPF1-202ENST00000381037 C6orf229H3BNL8 230 aa24.91■■□□□ 1.58
CDPF1-202ENST00000381037 UFL1O94874 794 aa24.91■■□□□ 1.58
CDPF1-202ENST00000381037 ATP2B4P23634 1241 aa24.91■■□□□ 1.58
CDPF1-202ENST00000381037 ATP8B2P98198 1209 aa24.91■■□□□ 1.58
CDPF1-202ENST00000381037 GPR101Q96P66 508 aaPredicted RBP24.91■■□□□ 1.58
CDPF1-202ENST00000381037 LEMD3Q9Y2U8 911 aa24.91■■□□□ 1.58
CDPF1-202ENST00000381037 EYA2O00167 538 aa24.9■■□□□ 1.58
CDPF1-202ENST00000381037 PPIP5K2O43314 1243 aa24.9■■□□□ 1.58
CDPF1-202ENST00000381037 POLA2Q14181 598 aa24.9■■□□□ 1.58
CDPF1-202ENST00000381037 WASHC4Q2M389 1173 aa24.9■■□□□ 1.58
CDPF1-202ENST00000381037 ATG9AQ7Z3C6 839 aa24.9■■□□□ 1.58
CDPF1-202ENST00000381037 LARGE2Q8N3Y3 721 aa24.9■■□□□ 1.58
CDPF1-202ENST00000381037 HELBQ8NG08 1087 aaPredicted RBP24.9■■□□□ 1.58
CDPF1-202ENST00000381037 FBXO3Q9UK99 471 aa24.9■■□□□ 1.58
CDPF1-202ENST00000381037 TAF5LO75529 589 aa24.9■■□□□ 1.58
CDPF1-202ENST00000381037 SSH3Q8TE77 659 aa24.9■■□□□ 1.58
CDPF1-202ENST00000381037 CHMP4BQ9H444 224 aaKnown RBP24.9■■□□□ 1.58
CDPF1-202ENST00000381037 PA2G4Q9UQ80 394 aaKnown RBP24.9■■□□□ 1.58
CDPF1-202ENST00000381037 FZD9O00144 591 aa24.89■■□□□ 1.57
CDPF1-202ENST00000381037 SNAP23O00161 211 aa24.89■■□□□ 1.57
CDPF1-202ENST00000381037 CEP85Q6P2H3 762 aa24.89■■□□□ 1.57
CDPF1-202ENST00000381037 VGLL2Q8N8G2 317 aa24.89■■□□□ 1.57
CDPF1-202ENST00000381037 SUPT16HQ9Y5B9 1047 aaKnown RBP24.89■■□□□ 1.57
CDPF1-202ENST00000381037 MROH5Q6ZUA9 1318 aa24.89■■□□□ 1.57
CDPF1-202ENST00000381037 IRS2Q9Y4H2 1338 aa24.89■■□□□ 1.57
CDPF1-202ENST00000381037 A0A1B0GUL6 1792 aa24.88■■□□□ 1.57
CDPF1-202ENST00000381037 CIAO1O76071 339 aa24.88■■□□□ 1.57
CDPF1-202ENST00000381037 EYA3Q99504 573 aa24.88■■□□□ 1.57
CDPF1-202ENST00000381037 ZNF804BA4D1E1 1349 aa24.88■■□□□ 1.57
CDPF1-202ENST00000381037 TIAM2Q8IVF5 1701 aa24.87■■□□□ 1.57
CDPF1-202ENST00000381037 JDP2Q8WYK2 163 aa24.87■■□□□ 1.57
CDPF1-202ENST00000381037 RIMBP2O15034 1052 aa24.86■■□□□ 1.57
CDPF1-202ENST00000381037 ZC3H12CQ9C0D7 883 aaKnown RBP24.86■■□□□ 1.57
CDPF1-202ENST00000381037 MED23Q9ULK4 1368 aa24.86■■□□□ 1.57
CDPF1-202ENST00000381037 TXNRD3Q86VQ6 643 aa24.86■■□□□ 1.57
CDPF1-202ENST00000381037 SIL1Q9H173 461 aa24.86■■□□□ 1.57
CDPF1-202ENST00000381037 PDE8BO95263 885 aa24.85■■□□□ 1.57
CDPF1-202ENST00000381037 KLRK1P26718 216 aa24.85■■□□□ 1.57
CDPF1-202ENST00000381037 C15orf52Q6ZUT6 534 aaKnown RBP24.85■■□□□ 1.57
CDPF1-202ENST00000381037 SIRT2Q8IXJ6 389 aa24.85■■□□□ 1.57
CDPF1-202ENST00000381037 NIM1KQ8IY84 436 aa24.84■■□□□ 1.57
CDPF1-202ENST00000381037 ZNRF3Q9ULT6 936 aa24.84■■□□□ 1.57
CDPF1-202ENST00000381037 IL15P40933 162 aaPredicted RBP24.83■■□□□ 1.57
CDPF1-202ENST00000381037 METTL24Q5JXM2 366 aa24.83■■□□□ 1.57
CDPF1-202ENST00000381037 RPAP2Q8IXW5 612 aaPredicted RBP24.83■■□□□ 1.57
CDPF1-202ENST00000381037 GLTPD2A6NH11 291 aa24.83■■□□□ 1.56
CDPF1-202ENST00000381037 YDJCA8MPS7 323 aa24.83■■□□□ 1.56
CDPF1-202ENST00000381037 UBE4AQ14139 1066 aa24.83■■□□□ 1.56
CDPF1-202ENST00000381037 CRBNQ96SW2 442 aa24.83■■□□□ 1.56
CDPF1-202ENST00000381037 ZNF541Q9H0D2 1346 aa24.82■■□□□ 1.56
CDPF1-202ENST00000381037 ZNF784Q8NCA9 323 aaPredicted RBP24.82■■□□□ 1.56
CDPF1-202ENST00000381037 NOP58Q9Y2X3 529 aaKnown RBP24.82■■□□□ 1.56
CDPF1-202ENST00000381037 FGFR2P21802 821 aa24.81■■□□□ 1.56
CDPF1-202ENST00000381037 DOK7Q18PE1 504 aa24.81■■□□□ 1.56
CDPF1-202ENST00000381037 DBNDD1Q9H9R9 158 aa24.81■■□□□ 1.56
CDPF1-202ENST00000381037 KCNJ4P48050 445 aa24.8■■□□□ 1.56
CDPF1-202ENST00000381037 ECE2O60344 883 aa24.79■■□□□ 1.56
CDPF1-202ENST00000381037 CXCL9Q07325 125 aa24.79■■□□□ 1.56
CDPF1-202ENST00000381037 DPY19L2Q6NUT2 758 aa24.79■■□□□ 1.56
CDPF1-202ENST00000381037 KCNQ5Q9NR82 932 aa24.79■■□□□ 1.56
CDPF1-202ENST00000381037 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.79■■□□□ 1.56
CDPF1-202ENST00000381037 DDNO94850 711 aaPredicted RBP24.78■■□□□ 1.56
CDPF1-202ENST00000381037 EIF6P56537 245 aaKnown RBP24.78■■□□□ 1.56
CDPF1-202ENST00000381037 PODNQ7Z5L7 613 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms