RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 UBE3BQ7Z3V4 1068 aa21.63■■□□□ 1.05
RER1-202ENST00000378512 SUPT20HQ8NEM7 779 aa21.63■■□□□ 1.05
RER1-202ENST00000378512 SPEF2Q9C093 1822 aa21.63■■□□□ 1.05
RER1-202ENST00000378512 PTPRCP08575 1304 aa21.63■■□□□ 1.05
RER1-202ENST00000378512 YDJCA8MPS7 323 aa21.63■■□□□ 1.05
RER1-202ENST00000378512 GMPSP49915 693 aaPredicted RBP21.63■■□□□ 1.05
RER1-202ENST00000378512 GPR101Q96P66 508 aaPredicted RBP21.63■■□□□ 1.05
RER1-202ENST00000378512 SHTN1A0MZ66 631 aa21.62■■□□□ 1.05
RER1-202ENST00000378512 TRAF5O00463 557 aa21.62■■□□□ 1.05
RER1-202ENST00000378512 BRPF1P55201 1214 aaPredicted RBP21.62■■□□□ 1.05
RER1-202ENST00000378512 GPRC5DQ9NZD1 345 aa21.62■■□□□ 1.05
RER1-202ENST00000378512 ALDH1L1O75891 902 aa21.61■■□□□ 1.05
RER1-202ENST00000378512 CSF1RP07333 972 aa21.61■■□□□ 1.05
RER1-202ENST00000378512 VEGFBP49765 207 aa21.61■■□□□ 1.05
RER1-202ENST00000378512 GPSM2P81274 684 aa21.61■■□□□ 1.05
RER1-202ENST00000378512 CCDC85AQ96PX6 553 aaPredicted RBP21.6■■□□□ 1.05
RER1-202ENST00000378512 PODXL2Q9NZ53 605 aa21.6■■□□□ 1.05
RER1-202ENST00000378512 POLLQ9UGP5 575 aa21.6■■□□□ 1.05
RER1-202ENST00000378512 NSFL1CQ9UNZ2 370 aaKnown RBP21.6■■□□□ 1.05
RER1-202ENST00000378512 RIMBP2O15034 1052 aa21.59■■□□□ 1.05
RER1-202ENST00000378512 CIAPIN1Q6FI81 312 aa21.59■■□□□ 1.05
RER1-202ENST00000378512 USP50Q70EL3 339 aaPredicted RBP21.59■■□□□ 1.05
RER1-202ENST00000378512 GREM2Q9H772 168 aa21.59■■□□□ 1.05
RER1-202ENST00000378512 DBNDD1Q9H9R9 158 aa21.58■■□□□ 1.05
RER1-202ENST00000378512 ADARB2Q9NS39 739 aaKnown RBP21.58■■□□□ 1.05
RER1-202ENST00000378512 UTYO14607 1347 aa21.58■■□□□ 1.04
RER1-202ENST00000378512 GRM8O00222 908 aa21.57■■□□□ 1.04
RER1-202ENST00000378512 KCNQ5Q9NR82 932 aa21.57■■□□□ 1.04
RER1-202ENST00000378512 ZBTB12Q9Y330 459 aaPredicted RBP21.57■■□□□ 1.04
RER1-202ENST00000378512 C6orf229H3BNL8 230 aa21.56■■□□□ 1.04
RER1-202ENST00000378512 HIRAP54198 1017 aaPredicted RBP21.56■■□□□ 1.04
RER1-202ENST00000378512 FOXO4P98177 505 aa21.56■■□□□ 1.04
RER1-202ENST00000378512 WASHC4Q2M389 1173 aa21.56■■□□□ 1.04
RER1-202ENST00000378512 TRPM4Q8TD43 1214 aa21.56■■□□□ 1.04
RER1-202ENST00000378512 CDC5LQ99459 802 aaKnown RBP21.56■■□□□ 1.04
RER1-202ENST00000378512 SRCIN1Q9C0H9 1055 aa21.56■■□□□ 1.04
RER1-202ENST00000378512 A0A1B0GUL6 1792 aa21.56■■□□□ 1.04
RER1-202ENST00000378512 DOK7Q18PE1 504 aa21.55■■□□□ 1.04
RER1-202ENST00000378512 ANKRD18AQ8IVF6 992 aa21.55■■□□□ 1.04
RER1-202ENST00000378512 BCL2L13Q9BXK5 485 aa21.55■■□□□ 1.04
RER1-202ENST00000378512 BSDC1Q9NW68 430 aaPredicted RBP21.55■■□□□ 1.04
RER1-202ENST00000378512 ABT1Q9ULW3 272 aaKnown RBP21.55■■□□□ 1.04
RER1-202ENST00000378512 PSME4Q14997 1843 aa21.55■■□□□ 1.04
RER1-202ENST00000378512 RASSF10A6NK89 507 aa21.55■■□□□ 1.04
RER1-202ENST00000378512 FOXN1O15353 648 aa21.55■■□□□ 1.04
RER1-202ENST00000378512 CST9Q5W186 159 aa21.55■■□□□ 1.04
RER1-202ENST00000378512 TBC1D16Q8TBP0 767 aa21.55■■□□□ 1.04
RER1-202ENST00000378512 PSMD14O00487 310 aa21.54■■□□□ 1.04
RER1-202ENST00000378512 HNRNPUQ00839 825 aaKnown RBP eCLIP21.54■■□□□ 1.04
RER1-202ENST00000378512 TNIP1Q15025 636 aa21.54■■□□□ 1.04
RER1-202ENST00000378512 SLC4A10Q6U841 1118 aa21.54■■□□□ 1.04
RER1-202ENST00000378512 TNS4Q8IZW8 715 aa21.54■■□□□ 1.04
RER1-202ENST00000378512 SMC4Q9NTJ3 1288 aa21.54■■□□□ 1.04
RER1-202ENST00000378512 ITGA6P23229 1130 aa21.53■■□□□ 1.04
RER1-202ENST00000378512 RARSP54136 660 aaKnown RBP21.53■■□□□ 1.04
RER1-202ENST00000378512 DEFB115Q30KQ5 88 aa21.53■■□□□ 1.04
RER1-202ENST00000378512 FAM161AQ3B820 660 aa21.53■■□□□ 1.04
RER1-202ENST00000378512 GLIS2Q9BZE0 524 aaPredicted RBP21.53■■□□□ 1.04
RER1-202ENST00000378512 CNOT7Q9UIV1 285 aaKnown RBP21.53■■□□□ 1.04
RER1-202ENST00000378512 SCN9AQ15858 1988 aa21.52■■□□□ 1.04
RER1-202ENST00000378512 ECE2O60344 883 aa21.52■■□□□ 1.04
RER1-202ENST00000378512 CAPN15O75808 1086 aa21.52■■□□□ 1.04
RER1-202ENST00000378512 EPHA10Q5JZY3 1008 aa21.52■■□□□ 1.04
RER1-202ENST00000378512 DLK2Q6UY11 383 aa21.52■■□□□ 1.04
RER1-202ENST00000378512 KAZALD1Q96I82 304 aa21.52■■□□□ 1.04
RER1-202ENST00000378512 XDHP47989 1333 aa21.52■■□□□ 1.03
RER1-202ENST00000378512 WTIPA6NIX2 430 aaPredicted RBP21.51■■□□□ 1.03
RER1-202ENST00000378512 EGFRP00533 1210 aa21.51■■□□□ 1.03
RER1-202ENST00000378512 MICALL2Q8IY33 904 aa21.51■■□□□ 1.03
RER1-202ENST00000378512 C9orf78Q9NZ63 289 aaPredicted RBP21.51■■□□□ 1.03
RER1-202ENST00000378512 MINPP1Q9UNW1 487 aa21.51■■□□□ 1.03
RER1-202ENST00000378512 TRPM7Q96QT4 1865 aa21.51■■□□□ 1.03
RER1-202ENST00000378512 ZBED9Q6R2W3 1325 aa21.51■■□□□ 1.03
RER1-202ENST00000378512 NBPF7P0C2Y1 421 aaPredicted RBP21.5■■□□□ 1.03
RER1-202ENST00000378512 EYA3Q99504 573 aa21.5■■□□□ 1.03
RER1-202ENST00000378512 WDR33Q9C0J8 1336 aaKnown RBP21.5■■□□□ 1.03
RER1-202ENST00000378512 ZNF646O15015 1829 aaPredicted RBP21.5■■□□□ 1.03
RER1-202ENST00000378512 UFL1O94874 794 aa21.49■■□□□ 1.03
RER1-202ENST00000378512 SAMD7Q7Z3H4 446 aa21.49■■□□□ 1.03
RER1-202ENST00000378512 PGAP2Q9UHJ9 254 aa21.49■■□□□ 1.03
RER1-202ENST00000378512 GGA1Q9UJY5 639 aa21.49■■□□□ 1.03
RER1-202ENST00000378512 GRM1Q13255 1194 aa21.48■■□□□ 1.03
RER1-202ENST00000378512 CYP4F22Q6NT55 531 aa21.48■■□□□ 1.03
RER1-202ENST00000378512 USP44Q9H0E7 712 aa21.48■■□□□ 1.03
RER1-202ENST00000378512 WBP1LQ9NX94 342 aa21.48■■□□□ 1.03
RER1-202ENST00000378512 ANKIB1Q9P2G1 1089 aa21.48■■□□□ 1.03
RER1-202ENST00000378512 NOB1Q9ULX3 412 aaKnown RBP21.48■■□□□ 1.03
RER1-202ENST00000378512 IGHMBP2P38935 993 aaKnown RBP21.47■■□□□ 1.03
RER1-202ENST00000378512 RABL6Q3YEC7 729 aaPredicted RBP21.47■■□□□ 1.03
RER1-202ENST00000378512 TBC1D10BQ4KMP7 808 aaPredicted RBP21.47■■□□□ 1.03
RER1-202ENST00000378512 LMBR1LQ6UX01 489 aa21.47■■□□□ 1.03
RER1-202ENST00000378512 ARHGAP45Q92619 1136 aa21.47■■□□□ 1.03
RER1-202ENST00000378512 SUCLG2Q96I99 432 aa21.47■■□□□ 1.03
RER1-202ENST00000378512 ANKRD18BA2A2Z9 1011 aa21.46■■□□□ 1.03
RER1-202ENST00000378512 CELF2O95319 508 aaKnown RBP21.46■■□□□ 1.03
RER1-202ENST00000378512 ATP2B4P23634 1241 aa21.46■■□□□ 1.03
RER1-202ENST00000378512 PAXIP1Q6ZW49 1069 aaPredicted RBP21.46■■□□□ 1.03
RER1-202ENST00000378512 H7C1D1 291 aa21.46■■□□□ 1.03
RER1-202ENST00000378512 IFIT5Q13325 482 aaKnown RBP21.46■■□□□ 1.03
RER1-202ENST00000378512 CAPNS2Q96L46 248 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms