RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 PNMA6EA0A0J9YXQ4 647 aa23.14■■□□□ 1.3
CDX4-201ENST00000373514 ERICH6BQ5W0A0 696 aa23.14■■□□□ 1.3
CDX4-201ENST00000373514 MPHOSPH8Q99549 860 aa23.14■■□□□ 1.3
CDX4-201ENST00000373514 HDAC5Q9UQL6 1122 aa23.14■■□□□ 1.3
CDX4-201ENST00000373514 FKBP4Q02790 459 aaKnown RBP eCLIP23.13■■□□□ 1.29
CDX4-201ENST00000373514 MTX1Q13505 466 aa23.13■■□□□ 1.29
CDX4-201ENST00000373514 RTKN2Q8IZC4 609 aa23.13■■□□□ 1.29
CDX4-201ENST00000373514 ZBTB40Q9NUA8 1239 aa23.13■■□□□ 1.29
CDX4-201ENST00000373514 CC2D2BQ6DHV5 1058 aa23.13■■□□□ 1.29
CDX4-201ENST00000373514 MPNDQ8N594 471 aa23.13■■□□□ 1.29
CDX4-201ENST00000373514 GPR101Q96P66 508 aaPredicted RBP23.13■■□□□ 1.29
CDX4-201ENST00000373514 MINPP1Q9UNW1 487 aa23.13■■□□□ 1.29
CDX4-201ENST00000373514 NSFL1CQ9UNZ2 370 aaKnown RBP23.13■■□□□ 1.29
CDX4-201ENST00000373514 PA2G4Q9UQ80 394 aaKnown RBP23.13■■□□□ 1.29
CDX4-201ENST00000373514 LTBP3Q9NS15 1303 aa23.12■■□□□ 1.29
CDX4-201ENST00000373514 WTIPA6NIX2 430 aaPredicted RBP23.12■■□□□ 1.29
CDX4-201ENST00000373514 SRGAP3O43295 1099 aa23.12■■□□□ 1.29
CDX4-201ENST00000373514 PTPN12Q05209 780 aaKnown RBP23.12■■□□□ 1.29
CDX4-201ENST00000373514 LRRC24Q50LG9 513 aa23.12■■□□□ 1.29
CDX4-201ENST00000373514 DPP8Q6V1X1 898 aaPredicted RBP23.12■■□□□ 1.29
CDX4-201ENST00000373514 TMX4Q9H1E5 349 aaPredicted RBP23.12■■□□□ 1.29
CDX4-201ENST00000373514 ZNF277Q9NRM2 450 aaPredicted RBP23.12■■□□□ 1.29
CDX4-201ENST00000373514 CHRNDQ07001 517 aa23.11■■□□□ 1.29
CDX4-201ENST00000373514 CEP85Q6P2H3 762 aa23.11■■□□□ 1.29
CDX4-201ENST00000373514 LDHAL6AQ6ZMR3 332 aa23.11■■□□□ 1.29
CDX4-201ENST00000373514 PSMD1Q99460 953 aa23.11■■□□□ 1.29
CDX4-201ENST00000373514 SIL1Q9H173 461 aa23.11■■□□□ 1.29
CDX4-201ENST00000373514 CNNM1Q9NRU3 951 aa23.11■■□□□ 1.29
CDX4-201ENST00000373514 HELBQ8NG08 1087 aaPredicted RBP23.1■■□□□ 1.29
CDX4-201ENST00000373514 ANKIB1Q9P2G1 1089 aa23.1■■□□□ 1.29
CDX4-201ENST00000373514 ARAP2Q8WZ64 1704 aa23.09■■□□□ 1.29
CDX4-201ENST00000373514 RNF181Q9P0P0 153 aa23.09■■□□□ 1.29
CDX4-201ENST00000373514 POLLQ9UGP5 575 aa23.09■■□□□ 1.29
CDX4-201ENST00000373514 XDHP47989 1333 aa23.09■■□□□ 1.29
CDX4-201ENST00000373514 TAF5LO75529 589 aa23.08■■□□□ 1.29
CDX4-201ENST00000373514 UFL1O94874 794 aa23.08■■□□□ 1.29
CDX4-201ENST00000373514 AOC3Q16853 763 aa23.08■■□□□ 1.28
CDX4-201ENST00000373514 C9orf131Q5VYM1 1079 aa23.08■■□□□ 1.28
CDX4-201ENST00000373514 TBC1D16Q8TBP0 767 aa23.08■■□□□ 1.28
CDX4-201ENST00000373514 RTFDC1Q9BY42 306 aaPredicted RBP23.08■■□□□ 1.28
CDX4-201ENST00000373514 PODXL2Q9NZ53 605 aa23.08■■□□□ 1.28
CDX4-201ENST00000373514 ZNF646O15015 1829 aaPredicted RBP23.07■■□□□ 1.28
CDX4-201ENST00000373514 SCN9AQ15858 1988 aa23.07■■□□□ 1.28
CDX4-201ENST00000373514 SNAP23O00161 211 aa23.07■■□□□ 1.28
CDX4-201ENST00000373514 LMNB1P20700 586 aa23.07■■□□□ 1.28
CDX4-201ENST00000373514 IARSP41252 1262 aaKnown RBP23.07■■□□□ 1.28
CDX4-201ENST00000373514 ATP8B2P98198 1209 aa23.07■■□□□ 1.28
CDX4-201ENST00000373514 POLA2Q14181 598 aa23.07■■□□□ 1.28
CDX4-201ENST00000373514 PSME4Q14997 1843 aa23.06■■□□□ 1.28
CDX4-201ENST00000373514 C6orf229H3BNL8 230 aa23.06■■□□□ 1.28
CDX4-201ENST00000373514 GRIPAP1Q4V328 841 aa23.06■■□□□ 1.28
CDX4-201ENST00000373514 ATG9AQ7Z3C6 839 aa23.06■■□□□ 1.28
CDX4-201ENST00000373514 GGA1Q9UJY5 639 aa23.06■■□□□ 1.28
CDX4-201ENST00000373514 RIPOR2Q9Y4F9 1068 aa23.06■■□□□ 1.28
CDX4-201ENST00000373514 EYA2O00167 538 aa23.05■■□□□ 1.28
CDX4-201ENST00000373514 EXOC6Q8TAG9 804 aa23.05■■□□□ 1.28
CDX4-201ENST00000373514 SSH3Q8TE77 659 aa23.05■■□□□ 1.28
CDX4-201ENST00000373514 COPRSQ9NQ92 184 aa23.05■■□□□ 1.28
CDX4-201ENST00000373514 RIMBP2O15034 1052 aa23.04■■□□□ 1.28
CDX4-201ENST00000373514 PPIP5K2O43314 1243 aa23.04■■□□□ 1.28
CDX4-201ENST00000373514 KLRK1P26718 216 aa23.04■■□□□ 1.28
CDX4-201ENST00000373514 SIRT2Q8IXJ6 389 aa23.04■■□□□ 1.28
CDX4-201ENST00000373514 CHMP4BQ9H444 224 aaKnown RBP23.04■■□□□ 1.28
CDX4-201ENST00000373514 MYH13Q9UKX3 1938 aa23.04■■□□□ 1.28
CDX4-201ENST00000373514 SUPT20HQ8NEM7 779 aa23.03■■□□□ 1.28
CDX4-201ENST00000373514 ANKRD2Q9GZV1 360 aa23.03■■□□□ 1.28
CDX4-201ENST00000373514 ATP2B4P23634 1241 aa23.03■■□□□ 1.28
CDX4-201ENST00000373514 METTL24Q5JXM2 366 aa23.03■■□□□ 1.28
CDX4-201ENST00000373514 MROH5Q6ZUA9 1318 aa23.03■■□□□ 1.28
CDX4-201ENST00000373514 VGLL2Q8N8G2 317 aa23.03■■□□□ 1.28
CDX4-201ENST00000373514 KIAA2012Q0VF49 1180 aa23.02■■□□□ 1.28
CDX4-201ENST00000373514 LARGE2Q8N3Y3 721 aa23.02■■□□□ 1.28
CDX4-201ENST00000373514 PPP4R2Q9NY27 417 aa23.02■■□□□ 1.28
CDX4-201ENST00000373514 MED23Q9ULK4 1368 aa23.01■■□□□ 1.27
CDX4-201ENST00000373514 ZNF804BA4D1E1 1349 aa23.01■■□□□ 1.27
CDX4-201ENST00000373514 CIAO1O76071 339 aa23.01■■□□□ 1.27
CDX4-201ENST00000373514 WASHC4Q2M389 1173 aa23.01■■□□□ 1.27
CDX4-201ENST00000373514 TXNRD3Q86VQ6 643 aa23.01■■□□□ 1.27
CDX4-201ENST00000373514 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.01■■□□□ 1.27
CDX4-201ENST00000373514 KCNJ4P48050 445 aa23■■□□□ 1.27
CDX4-201ENST00000373514 IRS2Q9Y4H2 1338 aa22.99■■□□□ 1.27
CDX4-201ENST00000373514 RPAP2Q8IXW5 612 aaPredicted RBP22.99■■□□□ 1.27
CDX4-201ENST00000373514 EYA3Q99504 573 aa22.99■■□□□ 1.27
CDX4-201ENST00000373514 LEMD3Q9Y2U8 911 aa22.99■■□□□ 1.27
CDX4-201ENST00000373514 PCDHB15Q9Y5E8 787 aa22.99■■□□□ 1.27
CDX4-201ENST00000373514 DOK7Q18PE1 504 aa22.98■■□□□ 1.27
CDX4-201ENST00000373514 DBNDD1Q9H9R9 158 aa22.98■■□□□ 1.27
CDX4-201ENST00000373514 FBXO3Q9UK99 471 aa22.98■■□□□ 1.27
CDX4-201ENST00000373514 ZNF541Q9H0D2 1346 aa22.98■■□□□ 1.27
CDX4-201ENST00000373514 IL15P40933 162 aaPredicted RBP22.98■■□□□ 1.27
CDX4-201ENST00000373514 EXOC6BQ9Y2D4 811 aa22.98■■□□□ 1.27
CDX4-201ENST00000373514 SURF6O75683 361 aaKnown RBP22.97■■□□□ 1.27
CDX4-201ENST00000373514 PDE8BO95263 885 aa22.97■■□□□ 1.27
CDX4-201ENST00000373514 TFCP2Q12800 502 aa22.97■■□□□ 1.27
CDX4-201ENST00000373514 NIM1KQ8IY84 436 aa22.97■■□□□ 1.27
CDX4-201ENST00000373514 ZNF609O15014 1411 aa22.97■■□□□ 1.27
CDX4-201ENST00000373514 YDJCA8MPS7 323 aa22.96■■□□□ 1.27
CDX4-201ENST00000373514 ECE2O60344 883 aa22.95■■□□□ 1.26
CDX4-201ENST00000373514 SASH1O94885 1247 aa22.95■■□□□ 1.26
CDX4-201ENST00000373514 JDP2Q8WYK2 163 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms