RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 ZBTB7BO15156 539 aaPredicted RBP17.16■□□□□ 0.34
SSR4-202ENST00000370085 C9orf131Q5VYM1 1079 aa17.16■□□□□ 0.34
SSR4-202ENST00000370085 JDP2Q8WYK2 163 aa17.16■□□□□ 0.34
SSR4-202ENST00000370085 RTFDC1Q9BY42 306 aaPredicted RBP17.16■□□□□ 0.34
SSR4-202ENST00000370085 PODXL2Q9NZ53 605 aa17.16■□□□□ 0.34
SSR4-202ENST00000370085 GGA1Q9UJY5 639 aa17.16■□□□□ 0.34
SSR4-202ENST00000370085 ZC3H4Q9UPT8 1303 aaKnown RBP17.16■□□□□ 0.34
SSR4-202ENST00000370085 IARSP41252 1262 aaKnown RBP17.15■□□□□ 0.34
SSR4-202ENST00000370085 KCNJ4P48050 445 aa17.15■□□□□ 0.34
SSR4-202ENST00000370085 ZNF277Q9NRM2 450 aaPredicted RBP17.15■□□□□ 0.34
SSR4-202ENST00000370085 MINPP1Q9UNW1 487 aa17.15■□□□□ 0.34
SSR4-202ENST00000370085 DICER1Q9UPY3 1922 aaKnown RBP17.14■□□□□ 0.33
SSR4-202ENST00000370085 SRGAP3O43295 1099 aa17.14■□□□□ 0.33
SSR4-202ENST00000370085 ATP2B4P23634 1241 aa17.14■□□□□ 0.33
SSR4-202ENST00000370085 YY1P25490 414 aa17.14■□□□□ 0.33
SSR4-202ENST00000370085 GPSM2P81274 684 aa17.14■□□□□ 0.33
SSR4-202ENST00000370085 MTX1Q13505 466 aa17.14■□□□□ 0.33
SSR4-202ENST00000370085 LARGE2Q8N3Y3 721 aa17.14■□□□□ 0.33
SSR4-202ENST00000370085 FBXO3Q9UK99 471 aa17.14■□□□□ 0.33
SSR4-202ENST00000370085 G3V3G9 751 aa17.13■□□□□ 0.33
SSR4-202ENST00000370085 PPIP5K2O43314 1243 aa17.13■□□□□ 0.33
SSR4-202ENST00000370085 UFL1O94874 794 aa17.13■□□□□ 0.33
SSR4-202ENST00000370085 WASHC4Q2M389 1173 aa17.13■□□□□ 0.33
SSR4-202ENST00000370085 DCAF8Q5TAQ9 597 aa17.13■□□□□ 0.33
SSR4-202ENST00000370085 ZNF594Q96JF6 807 aaPredicted RBP17.13■□□□□ 0.33
SSR4-202ENST00000370085 ZC3H12CQ9C0D7 883 aaKnown RBP17.13■□□□□ 0.33
SSR4-202ENST00000370085 LEMD3Q9Y2U8 911 aa17.13■□□□□ 0.33
SSR4-202ENST00000370085 MROH5Q6ZUA9 1318 aa17.13■□□□□ 0.33
SSR4-202ENST00000370085 SNED1Q8TER0 1413 aa17.13■□□□□ 0.33
SSR4-202ENST00000370085 CHRNDQ07001 517 aa17.12■□□□□ 0.33
SSR4-202ENST00000370085 NIM1KQ8IY84 436 aa17.12■□□□□ 0.33
SSR4-202ENST00000370085 TBC1D16Q8TBP0 767 aa17.12■□□□□ 0.33
SSR4-202ENST00000370085 C20orf194Q5TEA3 1177 aa17.11■□□□□ 0.33
SSR4-202ENST00000370085 DPY19L2Q6NUT2 758 aa17.11■□□□□ 0.33
SSR4-202ENST00000370085 COL4A1P02462 1669 aa17.1■□□□□ 0.33
SSR4-202ENST00000370085 EYA2O00167 538 aa17.1■□□□□ 0.33
SSR4-202ENST00000370085 HMMRO75330 724 aa17.1■□□□□ 0.33
SSR4-202ENST00000370085 CIAO1O76071 339 aa17.1■□□□□ 0.33
SSR4-202ENST00000370085 KIAA2012Q0VF49 1180 aa17.1■□□□□ 0.33
SSR4-202ENST00000370085 AOC3Q16853 763 aa17.1■□□□□ 0.33
SSR4-202ENST00000370085 METTL24Q5JXM2 366 aa17.1■□□□□ 0.33
SSR4-202ENST00000370085 ZBTB40Q9NUA8 1239 aa17.1■□□□□ 0.33
SSR4-202ENST00000370085 IL15P40933 162 aaPredicted RBP17.09■□□□□ 0.33
SSR4-202ENST00000370085 EIF6P56537 245 aaKnown RBP17.09■□□□□ 0.33
SSR4-202ENST00000370085 ATP8B2P98198 1209 aa17.09■□□□□ 0.33
SSR4-202ENST00000370085 PTPN12Q05209 780 aaKnown RBP17.09■□□□□ 0.33
SSR4-202ENST00000370085 RPAP2Q8IXW5 612 aaPredicted RBP17.09■□□□□ 0.33
SSR4-202ENST00000370085 C1orf115Q9H7X2 142 aa17.09■□□□□ 0.33
SSR4-202ENST00000370085 COPRSQ9NQ92 184 aa17.09■□□□□ 0.33
SSR4-202ENST00000370085 POLLQ9UGP5 575 aa17.09■□□□□ 0.33
SSR4-202ENST00000370085 RIPOR2Q9Y4F9 1068 aa17.09■□□□□ 0.33
SSR4-202ENST00000370085 SUPT16HQ9Y5B9 1047 aaKnown RBP17.09■□□□□ 0.33
SSR4-202ENST00000370085 ZNF804BA4D1E1 1349 aa17.09■□□□□ 0.33
SSR4-202ENST00000370085 TIAM2Q8IVF5 1701 aa17.09■□□□□ 0.33
SSR4-202ENST00000370085 LTBP1Q14766 1721 aa17.08■□□□□ 0.32
SSR4-202ENST00000370085 KDM2BQ8NHM5 1336 aa17.08■□□□□ 0.32
SSR4-202ENST00000370085 RFX5P48382 616 aaPredicted RBP17.08■□□□□ 0.32
SSR4-202ENST00000370085 G3BP1Q13283 466 aaKnown RBP eCLIP17.08■□□□□ 0.32
SSR4-202ENST00000370085 AAMPQ13685 434 aa17.08■□□□□ 0.32
SSR4-202ENST00000370085 SIL1Q9H173 461 aa17.08■□□□□ 0.32
SSR4-202ENST00000370085 DUOX1Q9NRD9 1551 aa17.07■□□□□ 0.32
SSR4-202ENST00000370085 MED23Q9ULK4 1368 aa17.07■□□□□ 0.32
SSR4-202ENST00000370085 RIMBP2O15034 1052 aa17.07■□□□□ 0.32
SSR4-202ENST00000370085 UBE4AQ14139 1066 aa17.07■□□□□ 0.32
SSR4-202ENST00000370085 CEP85Q6P2H3 762 aa17.07■□□□□ 0.32
SSR4-202ENST00000370085 SLC51AQ86UW1 340 aa17.07■□□□□ 0.32
SSR4-202ENST00000370085 HELBQ8NG08 1087 aaPredicted RBP17.07■□□□□ 0.32
SSR4-202ENST00000370085 KLHDC4Q8TBB5 520 aa17.07■□□□□ 0.32
SSR4-202ENST00000370085 PUS3Q9BZE2 481 aaKnown RBP17.07■□□□□ 0.32
SSR4-202ENST00000370085 CEP126Q9P2H0 1117 aa17.07■□□□□ 0.32
SSR4-202ENST00000370085 ZNRF3Q9ULT6 936 aa17.07■□□□□ 0.32
SSR4-202ENST00000370085 PNMA6EA0A0J9YXQ4 647 aa17.06■□□□□ 0.32
SSR4-202ENST00000370085 TAF5LO75529 589 aa17.06■□□□□ 0.32
SSR4-202ENST00000370085 CENPBP07199 599 aaPredicted RBP17.06■□□□□ 0.32
SSR4-202ENST00000370085 PRELPP51888 382 aa17.06■□□□□ 0.32
SSR4-202ENST00000370085 OS9Q13438 667 aaPredicted RBP17.06■□□□□ 0.32
SSR4-202ENST00000370085 LRRC24Q50LG9 513 aa17.06■□□□□ 0.32
SSR4-202ENST00000370085 SSH3Q8TE77 659 aa17.06■□□□□ 0.32
SSR4-202ENST00000370085 PDE8BO95263 885 aa17.05■□□□□ 0.32
SSR4-202ENST00000370085 POLA2Q14181 598 aa17.05■□□□□ 0.32
SSR4-202ENST00000370085 PUM3Q15397 648 aaKnown RBP17.05■□□□□ 0.32
SSR4-202ENST00000370085 HSP90AB4PQ58FF6 505 aa17.05■□□□□ 0.32
SSR4-202ENST00000370085 ZNF804AQ7Z570 1209 aa17.05■□□□□ 0.32
SSR4-202ENST00000370085 PA2G4Q9UQ80 394 aaKnown RBP17.05■□□□□ 0.32
SSR4-202ENST00000370085 GLTPD2A6NH11 291 aa17.04■□□□□ 0.32
SSR4-202ENST00000370085 FZD9O00144 591 aa17.04■□□□□ 0.32
SSR4-202ENST00000370085 IFIT1P09914 478 aaKnown RBP17.04■□□□□ 0.32
SSR4-202ENST00000370085 TNIP1Q15025 636 aa17.04■□□□□ 0.32
SSR4-202ENST00000370085 AKAP2Q9Y2D5 859 aa17.04■□□□□ 0.32
SSR4-202ENST00000370085 A0A1B0GUL6 1792 aa17.04■□□□□ 0.32
SSR4-202ENST00000370085 ECE2O60344 883 aa17.03■□□□□ 0.32
SSR4-202ENST00000370085 SURF6O75683 361 aaKnown RBP17.03■□□□□ 0.32
SSR4-202ENST00000370085 SLC5A1P13866 664 aa17.03■□□□□ 0.32
SSR4-202ENST00000370085 CAVIN4Q5BKX8 364 aa17.03■□□□□ 0.32
SSR4-202ENST00000370085 C15orf52Q6ZUT6 534 aaKnown RBP17.03■□□□□ 0.32
SSR4-202ENST00000370085 ATG9AQ7Z3C6 839 aa17.03■□□□□ 0.32
SSR4-202ENST00000370085 PODNQ7Z5L7 613 aa17.03■□□□□ 0.32
SSR4-202ENST00000370085 VPS37DQ86XT2 251 aa17.03■□□□□ 0.32
SSR4-202ENST00000370085 ERC1Q8IUD2 1116 aa17.03■□□□□ 0.32
SSR4-202ENST00000370085 CRBNQ96SW2 442 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms