RNA–Protein interactions for RNA: ENST00000368985.7

CTSS-201, Transcript of cathepsin S, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSS, Length 4,107 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSS-201ENST00000368985 UTYO14607 1347 aa5.91□□□□□ -1.46
CTSS-201ENST00000368985 SH3TC1Q8TE82 1336 aa5.91□□□□□ -1.46
CTSS-201ENST00000368985 CT47B1P0C2W7 299 aaPredicted RBP5.91□□□□□ -1.46
CTSS-201ENST00000368985 ZNF280AP59817 542 aaPredicted RBP5.91□□□□□ -1.46
CTSS-201ENST00000368985 TNIP1Q15025 636 aa5.91□□□□□ -1.46
CTSS-201ENST00000368985 MTMR14Q8NCE2 650 aa5.91□□□□□ -1.46
CTSS-201ENST00000368985 COL2A1P02458 1487 aaPredicted RBP5.91□□□□□ -1.46
CTSS-201ENST00000368985 RPAP1Q9BWH6 1393 aaPredicted RBP5.91□□□□□ -1.46
CTSS-201ENST00000368985 ABCC4O15439 1325 aa5.91□□□□□ -1.46
CTSS-201ENST00000368985 IPO8O15397 1037 aaKnown RBP5.91□□□□□ -1.46
CTSS-201ENST00000368985 TRIM27P14373 513 aa5.91□□□□□ -1.46
CTSS-201ENST00000368985 RGS19P49795 217 aa5.91□□□□□ -1.46
CTSS-201ENST00000368985 CCDC85AQ96PX6 553 aaPredicted RBP5.91□□□□□ -1.46
CTSS-201ENST00000368985 PHAXQ9H814 394 aaKnown RBP5.91□□□□□ -1.46
CTSS-201ENST00000368985 ADARB2Q9NS39 739 aaKnown RBP5.91□□□□□ -1.46
CTSS-201ENST00000368985 TLL2Q9Y6L7 1015 aa5.91□□□□□ -1.46
CTSS-201ENST00000368985 SYNE4Q8N205 404 aa5.9□□□□□ -1.46
CTSS-201ENST00000368985 EYA3Q99504 573 aa5.9□□□□□ -1.46
CTSS-201ENST00000368985 FBXO3Q9UK99 471 aa5.9□□□□□ -1.46
CTSS-201ENST00000368985 DOCK2Q92608 1830 aa5.9□□□□□ -1.46
CTSS-201ENST00000368985 GOLGB1Q14789 3259 aaKnown RBP5.9□□□□□ -1.46
CTSS-201ENST00000368985 IRS2Q9Y4H2 1338 aa5.9□□□□□ -1.46
CTSS-201ENST00000368985 NPHP1O15259 732 aa5.9□□□□□ -1.46
CTSS-201ENST00000368985 SMIM5Q71RC9 77 aa5.9□□□□□ -1.46
CTSS-201ENST00000368985 AGBL3Q8NEM8 1001 aa5.9□□□□□ -1.46
CTSS-201ENST00000368985 NLRP3Q96P20 1036 aa5.9□□□□□ -1.46
CTSS-201ENST00000368985 NMRK2Q9NPI5 230 aa5.9□□□□□ -1.46
CTSS-201ENST00000368985 CHPF2Q9P2E5 772 aa5.9□□□□□ -1.46
CTSS-201ENST00000368985 ZNRF3Q9ULT6 936 aa5.9□□□□□ -1.46
CTSS-201ENST00000368985 PPP2R3BQ9Y5P8 575 aa5.9□□□□□ -1.46
CTSS-201ENST00000368985 VAMP4O75379 141 aa5.9□□□□□ -1.47
CTSS-201ENST00000368985 RASSF7Q02833 373 aa5.9□□□□□ -1.47
CTSS-201ENST00000368985 PAXIP1Q6ZW49 1069 aaPredicted RBP5.9□□□□□ -1.47
CTSS-201ENST00000368985 ZBTB38Q8NAP3 1195 aaPredicted RBP5.9□□□□□ -1.47
CTSS-201ENST00000368985 TMEM88BA6NKF7 163 aa5.89□□□□□ -1.47
CTSS-201ENST00000368985 SUSD4Q5VX71 490 aa5.89□□□□□ -1.47
CTSS-201ENST00000368985 ZNF521Q96K83 1311 aa5.89□□□□□ -1.47
CTSS-201ENST00000368985 DDX60LQ5H9U9 1706 aaKnown RBP5.89□□□□□ -1.47
CTSS-201ENST00000368985 ECE1P42892 770 aa5.89□□□□□ -1.47
CTSS-201ENST00000368985 EIF6P56537 245 aaKnown RBP5.89□□□□□ -1.47
CTSS-201ENST00000368985 ATF7IPQ6VMQ6 1270 aa5.89□□□□□ -1.47
CTSS-201ENST00000368985 RRAGCQ9HB90 399 aa5.89□□□□□ -1.47
CTSS-201ENST00000368985 LOC285556D6RIA3 1793 aa5.89□□□□□ -1.47
CTSS-201ENST00000368985 ATP5J2-PTCD1G3V325 749 aa5.89□□□□□ -1.47
CTSS-201ENST00000368985 HLFQ16534 295 aa5.89□□□□□ -1.47
CTSS-201ENST00000368985 ERFEQ4G0M1 354 aa5.89□□□□□ -1.47
CTSS-201ENST00000368985 RIC3Q7Z5B4 369 aa5.89□□□□□ -1.47
CTSS-201ENST00000368985 RPGRQ92834 1020 aaKnown RBP5.89□□□□□ -1.47
CTSS-201ENST00000368985 ZBTB3Q9H5J0 574 aa5.89□□□□□ -1.47
CTSS-201ENST00000368985 ZNF541Q9H0D2 1346 aa5.88□□□□□ -1.47
CTSS-201ENST00000368985 DDX58O95786 925 aaKnown RBP5.88□□□□□ -1.47
CTSS-201ENST00000368985 EPHX2P34913 555 aa5.88□□□□□ -1.47
CTSS-201ENST00000368985 MAP2K1Q02750 393 aaPredicted RBP5.88□□□□□ -1.47
CTSS-201ENST00000368985 OS9Q13438 667 aaPredicted RBP5.88□□□□□ -1.47
CTSS-201ENST00000368985 BICDL1Q6ZP65 573 aa5.88□□□□□ -1.47
CTSS-201ENST00000368985 METTL22Q9BUU2 404 aaPredicted RBP5.88□□□□□ -1.47
CTSS-201ENST00000368985 GPRC5DQ9NZD1 345 aa5.88□□□□□ -1.47
CTSS-201ENST00000368985 PDS5AQ29RF7 1337 aaKnown RBP5.88□□□□□ -1.47
CTSS-201ENST00000368985 VIL1P09327 827 aaKnown RBP5.88□□□□□ -1.47
CTSS-201ENST00000368985 CCDC30Q5VVM6 783 aa5.88□□□□□ -1.47
CTSS-201ENST00000368985 TMED8Q6PL24 325 aaPredicted RBP5.88□□□□□ -1.47
CTSS-201ENST00000368985 ZBED3Q96IU2 234 aaPredicted RBP5.88□□□□□ -1.47
CTSS-201ENST00000368985 MRIQ9BWK5 157 aa5.88□□□□□ -1.47
CTSS-201ENST00000368985 WBP1LQ9NX94 342 aa5.88□□□□□ -1.47
CTSS-201ENST00000368985 TBC1D2BQ9UPU7 963 aa5.88□□□□□ -1.47
CTSS-201ENST00000368985 PI4KAP2A4QPH2 592 aa5.88□□□□□ -1.47
CTSS-201ENST00000368985 CTCFP49711 727 aaPredicted RBP5.88□□□□□ -1.47
CTSS-201ENST00000368985 SCNN1DP51172 638 aa5.88□□□□□ -1.47
CTSS-201ENST00000368985 MAP3K11Q16584 847 aa5.88□□□□□ -1.47
CTSS-201ENST00000368985 PROSER3Q2NL68 480 aa5.88□□□□□ -1.47
CTSS-201ENST00000368985 PI4KAP1Q8N8J0 262 aa5.88□□□□□ -1.47
CTSS-201ENST00000368985 C9orf78Q9NZ63 289 aaPredicted RBP5.88□□□□□ -1.47
CTSS-201ENST00000368985 PDE8AO60658 829 aa5.87□□□□□ -1.47
CTSS-201ENST00000368985 CSF1RP07333 972 aa5.87□□□□□ -1.47
CTSS-201ENST00000368985 ATP2B4P23634 1241 aa5.87□□□□□ -1.47
CTSS-201ENST00000368985 GPTP24298 496 aa5.87□□□□□ -1.47
CTSS-201ENST00000368985 NIM1KQ8IY84 436 aa5.87□□□□□ -1.47
CTSS-201ENST00000368985 TMX4Q9H1E5 349 aaPredicted RBP5.87□□□□□ -1.47
CTSS-201ENST00000368985 ZCCHC17Q9NP64 241 aaKnown RBP5.87□□□□□ -1.47
CTSS-201ENST00000368985 C21orf2O43822 256 aa5.87□□□□□ -1.47
CTSS-201ENST00000368985 FLIIQ13045 1269 aa5.87□□□□□ -1.47
CTSS-201ENST00000368985 IFNLR1Q8IU57 520 aaPredicted RBP5.87□□□□□ -1.47
CTSS-201ENST00000368985 JDP2Q8WYK2 163 aa5.87□□□□□ -1.47
CTSS-201ENST00000368985 LNPKQ9C0E8 428 aa5.87□□□□□ -1.47
CTSS-201ENST00000368985 LEMD3Q9Y2U8 911 aa5.87□□□□□ -1.47
CTSS-201ENST00000368985 H7C1W4 665 aa5.87□□□□□ -1.47
CTSS-201ENST00000368985 CASP7P55210 303 aa5.87□□□□□ -1.47
CTSS-201ENST00000368985 GMLQ99445 158 aa5.87□□□□□ -1.47
CTSS-201ENST00000368985 LMOD1P29536 600 aaPredicted RBP5.86□□□□□ -1.47
CTSS-201ENST00000368985 CWF19L2Q2TBE0 894 aaKnown RBP5.86□□□□□ -1.47
CTSS-201ENST00000368985 ANKRD45Q5TZF3 282 aa5.86□□□□□ -1.47
CTSS-201ENST00000368985 TTLL7Q6ZT98 887 aa5.86□□□□□ -1.47
CTSS-201ENST00000368985 ANKRD13DQ6ZTN6 518 aa5.86□□□□□ -1.47
CTSS-201ENST00000368985 WWC3Q9ULE0 1092 aa5.86□□□□□ -1.47
CTSS-201ENST00000368985 PHIPQ8WWQ0 1821 aa5.86□□□□□ -1.47
CTSS-201ENST00000368985 XDHP47989 1333 aa5.86□□□□□ -1.47
CTSS-201ENST00000368985 MAP4K4O95819 1239 aaPredicted RBP5.86□□□□□ -1.47
CTSS-201ENST00000368985 KSR2Q6VAB6 950 aa5.86□□□□□ -1.47
CTSS-201ENST00000368985 DDX46Q7L014 1031 aaKnown RBP5.86□□□□□ -1.47
CTSS-201ENST00000368985 COPS6Q7L5N1 327 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms