RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 USP50Q70EL3 339 aaPredicted RBP18.6■□□□□ 0.57
SF3B5-201ENST00000367569 H7C1W4 665 aa18.59■□□□□ 0.57
SF3B5-201ENST00000367569 CASP7P55210 303 aa18.59■□□□□ 0.57
SF3B5-201ENST00000367569 FAM161AQ3B820 660 aa18.59■□□□□ 0.57
SF3B5-201ENST00000367569 CCDC152Q4G0S7 254 aa18.59■□□□□ 0.57
SF3B5-201ENST00000367569 GPR101Q96P66 508 aaPredicted RBP18.59■□□□□ 0.57
SF3B5-201ENST00000367569 GREM2Q9H772 168 aa18.59■□□□□ 0.57
SF3B5-201ENST00000367569 GPRC5DQ9NZD1 345 aa18.59■□□□□ 0.57
SF3B5-201ENST00000367569 RASSF10A6NK89 507 aa18.58■□□□□ 0.56
SF3B5-201ENST00000367569 ALDH1L2Q3SY69 923 aa18.58■□□□□ 0.56
SF3B5-201ENST00000367569 CIAPIN1Q6FI81 312 aa18.58■□□□□ 0.56
SF3B5-201ENST00000367569 TMC4Q7Z404 712 aa18.58■□□□□ 0.56
SF3B5-201ENST00000367569 SRCIN1Q9C0H9 1055 aa18.58■□□□□ 0.56
SF3B5-201ENST00000367569 TNNQ9UQP3 1299 aa18.58■□□□□ 0.56
SF3B5-201ENST00000367569 PTPRCP08575 1304 aa18.57■□□□□ 0.56
SF3B5-201ENST00000367569 RAD17O75943 681 aa18.57■□□□□ 0.56
SF3B5-201ENST00000367569 GMPSP49915 693 aaPredicted RBP18.57■□□□□ 0.56
SF3B5-201ENST00000367569 RARSP54136 660 aaKnown RBP18.57■□□□□ 0.56
SF3B5-201ENST00000367569 DEFB115Q30KQ5 88 aa18.57■□□□□ 0.56
SF3B5-201ENST00000367569 ADARB2Q9NS39 739 aaKnown RBP18.57■□□□□ 0.56
SF3B5-201ENST00000367569 NOB1Q9ULX3 412 aaKnown RBP18.57■□□□□ 0.56
SF3B5-201ENST00000367569 CHMP3Q9Y3E7 222 aa18.57■□□□□ 0.56
SF3B5-201ENST00000367569 YDJCA8MPS7 323 aa18.56■□□□□ 0.56
SF3B5-201ENST00000367569 TRAF5O00463 557 aa18.56■□□□□ 0.56
SF3B5-201ENST00000367569 FOXN1O15353 648 aa18.56■□□□□ 0.56
SF3B5-201ENST00000367569 EPHA10Q5JZY3 1008 aa18.56■□□□□ 0.56
SF3B5-201ENST00000367569 TTLL11Q8NHH1 800 aa18.56■□□□□ 0.56
SF3B5-201ENST00000367569 GRM8O00222 908 aa18.55■□□□□ 0.56
SF3B5-201ENST00000367569 CAPN15O75808 1086 aa18.55■□□□□ 0.56
SF3B5-201ENST00000367569 BCAR3O75815 825 aa18.55■□□□□ 0.56
SF3B5-201ENST00000367569 GPSM2P81274 684 aa18.55■□□□□ 0.56
SF3B5-201ENST00000367569 C9orf78Q9NZ63 289 aaPredicted RBP18.55■□□□□ 0.56
SF3B5-201ENST00000367569 ABT1Q9ULW3 272 aaKnown RBP18.55■□□□□ 0.56
SF3B5-201ENST00000367569 NSFL1CQ9UNZ2 370 aaKnown RBP18.55■□□□□ 0.56
SF3B5-201ENST00000367569 CT47B1P0C2W7 299 aaPredicted RBP18.54■□□□□ 0.56
SF3B5-201ENST00000367569 HSP90B1P14625 803 aaKnown RBP18.54■□□□□ 0.56
SF3B5-201ENST00000367569 RPS8P62241 208 aaKnown RBP18.54■□□□□ 0.56
SF3B5-201ENST00000367569 TNIP1Q15025 636 aa18.54■□□□□ 0.56
SF3B5-201ENST00000367569 TRPM7Q96QT4 1865 aa18.54■□□□□ 0.56
SF3B5-201ENST00000367569 SHTN1A0MZ66 631 aa18.53■□□□□ 0.56
SF3B5-201ENST00000367569 ALDH1L1O75891 902 aa18.53■□□□□ 0.56
SF3B5-201ENST00000367569 NBPF7P0C2Y1 421 aaPredicted RBP18.53■□□□□ 0.56
SF3B5-201ENST00000367569 HIRAP54198 1017 aaPredicted RBP18.53■□□□□ 0.56
SF3B5-201ENST00000367569 WASHC4Q2M389 1173 aa18.53■□□□□ 0.56
SF3B5-201ENST00000367569 CST9Q5W186 159 aa18.53■□□□□ 0.56
SF3B5-201ENST00000367569 ANKRD18AQ8IVF6 992 aa18.53■□□□□ 0.56
SF3B5-201ENST00000367569 FRAT1Q92837 279 aaPredicted RBP18.53■□□□□ 0.56
SF3B5-201ENST00000367569 SUCLG2Q96I99 432 aa18.53■□□□□ 0.56
SF3B5-201ENST00000367569 WBP1LQ9NX94 342 aa18.53■□□□□ 0.56
SF3B5-201ENST00000367569 POLLQ9UGP5 575 aa18.53■□□□□ 0.56
SF3B5-201ENST00000367569 WDR33Q9C0J8 1336 aaKnown RBP18.52■□□□□ 0.56
SF3B5-201ENST00000367569 RIMBP2O15034 1052 aa18.52■□□□□ 0.56
SF3B5-201ENST00000367569 ITGA6P23229 1130 aa18.52■□□□□ 0.56
SF3B5-201ENST00000367569 FOXO4P98177 505 aa18.52■□□□□ 0.56
SF3B5-201ENST00000367569 KIF16BQ96L93 1317 aa18.51■□□□□ 0.55
SF3B5-201ENST00000367569 C6orf229H3BNL8 230 aa18.51■□□□□ 0.55
SF3B5-201ENST00000367569 TRPM4Q8TD43 1214 aa18.51■□□□□ 0.55
SF3B5-201ENST00000367569 AIDAQ96BJ3 306 aa18.51■□□□□ 0.55
SF3B5-201ENST00000367569 YTHDC1Q96MU7 727 aaKnown RBP18.51■□□□□ 0.55
SF3B5-201ENST00000367569 PLA2G12BQ9BX93 195 aa18.51■□□□□ 0.55
SF3B5-201ENST00000367569 GLIS2Q9BZE0 524 aaPredicted RBP18.51■□□□□ 0.55
SF3B5-201ENST00000367569 DBNDD1Q9H9R9 158 aa18.51■□□□□ 0.55
SF3B5-201ENST00000367569 PGAP2Q9UHJ9 254 aa18.51■□□□□ 0.55
SF3B5-201ENST00000367569 CNOT7Q9UIV1 285 aaKnown RBP18.51■□□□□ 0.55
SF3B5-201ENST00000367569 ZBTB12Q9Y330 459 aaPredicted RBP18.51■□□□□ 0.55
SF3B5-201ENST00000367569 SCN9AQ15858 1988 aa18.51■□□□□ 0.55
SF3B5-201ENST00000367569 RTL9Q8NET4 1388 aa18.51■□□□□ 0.55
SF3B5-201ENST00000367569 WTIPA6NIX2 430 aaPredicted RBP18.5■□□□□ 0.55
SF3B5-201ENST00000367569 LMBR1LQ6UX01 489 aa18.5■□□□□ 0.55
SF3B5-201ENST00000367569 ZNF594Q96JF6 807 aaPredicted RBP18.5■□□□□ 0.55
SF3B5-201ENST00000367569 CDC5LQ99459 802 aaKnown RBP18.5■□□□□ 0.55
SF3B5-201ENST00000367569 KCNQ5Q9NR82 932 aa18.5■□□□□ 0.55
SF3B5-201ENST00000367569 PSMD14O00487 310 aa18.49■□□□□ 0.55
SF3B5-201ENST00000367569 UFL1O94874 794 aa18.49■□□□□ 0.55
SF3B5-201ENST00000367569 CTCFP49711 727 aaPredicted RBP18.49■□□□□ 0.55
SF3B5-201ENST00000367569 DOK7Q18PE1 504 aa18.49■□□□□ 0.55
SF3B5-201ENST00000367569 TBC1D16Q8TBP0 767 aa18.49■□□□□ 0.55
SF3B5-201ENST00000367569 CLUAP1Q96AJ1 413 aa18.49■□□□□ 0.55
SF3B5-201ENST00000367569 KAZALD1Q96I82 304 aa18.49■□□□□ 0.55
SF3B5-201ENST00000367569 PRDM10Q9NQV6 1147 aa18.49■□□□□ 0.55
SF3B5-201ENST00000367569 ANKIB1Q9P2G1 1089 aa18.49■□□□□ 0.55
SF3B5-201ENST00000367569 CYP4F22Q6NT55 531 aa18.48■□□□□ 0.55
SF3B5-201ENST00000367569 PAXIP1Q6ZW49 1069 aaPredicted RBP18.48■□□□□ 0.55
SF3B5-201ENST00000367569 MICALL2Q8IY33 904 aa18.48■□□□□ 0.55
SF3B5-201ENST00000367569 ZC3H15Q8WU90 426 aaKnown RBP18.48■□□□□ 0.55
SF3B5-201ENST00000367569 CAPNS2Q96L46 248 aa18.48■□□□□ 0.55
SF3B5-201ENST00000367569 API5Q9BZZ5 524 aaKnown RBP18.48■□□□□ 0.55
SF3B5-201ENST00000367569 BICC1Q9H694 974 aaKnown RBP18.48■□□□□ 0.55
SF3B5-201ENST00000367569 TLL2Q9Y6L7 1015 aa18.48■□□□□ 0.55
SF3B5-201ENST00000367569 H7C1D1 291 aa18.47■□□□□ 0.55
SF3B5-201ENST00000367569 ECE2O60344 883 aa18.47■□□□□ 0.55
SF3B5-201ENST00000367569 CELF2O95319 508 aaKnown RBP18.47■□□□□ 0.55
SF3B5-201ENST00000367569 CSF1RP07333 972 aa18.47■□□□□ 0.55
SF3B5-201ENST00000367569 IGHMBP2P38935 993 aaKnown RBP18.47■□□□□ 0.55
SF3B5-201ENST00000367569 LBX1P52954 281 aa18.47■□□□□ 0.55
SF3B5-201ENST00000367569 GRM1Q13255 1194 aa18.47■□□□□ 0.55
SF3B5-201ENST00000367569 DPF2Q92785 391 aa18.47■□□□□ 0.55
SF3B5-201ENST00000367569 EYA3Q99504 573 aa18.47■□□□□ 0.55
SF3B5-201ENST00000367569 ZNF646O15015 1829 aaPredicted RBP18.46■□□□□ 0.55
SF3B5-201ENST00000367569 PSME4Q14997 1843 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms