RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 GPSM2P81274 684 aa11.75□□□□□ -0.53
MRPL55-216ENST00000366744 IFIT5Q13325 482 aaKnown RBP11.75□□□□□ -0.53
MRPL55-216ENST00000366744 TNIP1Q15025 636 aa11.75□□□□□ -0.53
MRPL55-216ENST00000366744 PNMA8AQ86V59 439 aaPredicted RBP11.75□□□□□ -0.53
MRPL55-216ENST00000366744 API5Q9BZZ5 524 aaKnown RBP11.75□□□□□ -0.53
MRPL55-216ENST00000366744 ZC3H12CQ9C0D7 883 aaKnown RBP11.75□□□□□ -0.53
MRPL55-216ENST00000366744 SCN9AQ15858 1988 aa11.75□□□□□ -0.53
MRPL55-216ENST00000366744 ZBED9Q6R2W3 1325 aa11.75□□□□□ -0.53
MRPL55-216ENST00000366744 ADAMTSL1Q8N6G6 1762 aa11.74□□□□□ -0.53
MRPL55-216ENST00000366744 KCNJ4P48050 445 aa11.74□□□□□ -0.53
MRPL55-216ENST00000366744 CCDC57Q2TAC2 916 aa11.74□□□□□ -0.53
MRPL55-216ENST00000366744 EAPPQ56P03 285 aaPredicted RBP11.74□□□□□ -0.53
MRPL55-216ENST00000366744 SLC51AQ86UW1 340 aa11.74□□□□□ -0.53
MRPL55-216ENST00000366744 TRMT2AQ8IZ69 625 aaKnown RBP11.74□□□□□ -0.53
MRPL55-216ENST00000366744 BSDC1Q9NW68 430 aaPredicted RBP11.74□□□□□ -0.53
MRPL55-216ENST00000366744 PODXL2Q9NZ53 605 aa11.74□□□□□ -0.53
MRPL55-216ENST00000366744 RIMBP2O15034 1052 aa11.73□□□□□ -0.53
MRPL55-216ENST00000366744 ATP2B4P23634 1241 aa11.73□□□□□ -0.53
MRPL55-216ENST00000366744 EPHX2P34913 555 aa11.73□□□□□ -0.53
MRPL55-216ENST00000366744 CCT4P50991 539 aaKnown RBP11.73□□□□□ -0.53
MRPL55-216ENST00000366744 APLP1P51693 650 aa11.73□□□□□ -0.53
MRPL55-216ENST00000366744 CIAPIN1Q6FI81 312 aa11.73□□□□□ -0.53
MRPL55-216ENST00000366744 LDHDQ86WU2 507 aa11.73□□□□□ -0.53
MRPL55-216ENST00000366744 TBC1D16Q8TBP0 767 aa11.73□□□□□ -0.53
MRPL55-216ENST00000366744 ANKRD2Q9GZV1 360 aa11.73□□□□□ -0.53
MRPL55-216ENST00000366744 MED23Q9ULK4 1368 aa11.73□□□□□ -0.53
MRPL55-216ENST00000366744 CEP350Q5VT06 3117 aa11.73□□□□□ -0.53
MRPL55-216ENST00000366744 ARAP2Q8WZ64 1704 aa11.72□□□□□ -0.53
MRPL55-216ENST00000366744 IPO8O15397 1037 aaKnown RBP11.72□□□□□ -0.53
MRPL55-216ENST00000366744 ECE2O60344 883 aa11.72□□□□□ -0.53
MRPL55-216ENST00000366744 CASP7P55210 303 aa11.72□□□□□ -0.53
MRPL55-216ENST00000366744 CHADLQ6NUI6 762 aa11.72□□□□□ -0.53
MRPL55-216ENST00000366744 TAF1DQ9H5J8 278 aaPredicted RBP11.72□□□□□ -0.53
MRPL55-216ENST00000366744 DBNDD1Q9H9R9 158 aa11.72□□□□□ -0.53
MRPL55-216ENST00000366744 HDAC5Q9UQL6 1122 aa11.72□□□□□ -0.53
MRPL55-216ENST00000366744 CLEC11AQ9Y240 323 aa11.72□□□□□ -0.53
MRPL55-216ENST00000366744 CSF1RP07333 972 aa11.71□□□□□ -0.53
MRPL55-216ENST00000366744 LMBR1LQ6UX01 489 aa11.71□□□□□ -0.53
MRPL55-216ENST00000366744 CNNM1Q9NRU3 951 aa11.71□□□□□ -0.53
MRPL55-216ENST00000366744 POLLQ9UGP5 575 aa11.71□□□□□ -0.53
MRPL55-216ENST00000366744 ZNF646O15015 1829 aaPredicted RBP11.7□□□□□ -0.54
MRPL55-216ENST00000366744 ECM29Q5VYK3 1845 aa11.7□□□□□ -0.54
MRPL55-216ENST00000366744 RAD17O75943 681 aa11.7□□□□□ -0.54
MRPL55-216ENST00000366744 UBTFL1P0CB47 393 aaPredicted RBP11.7□□□□□ -0.54
MRPL55-216ENST00000366744 GMPSP49915 693 aaPredicted RBP11.7□□□□□ -0.54
MRPL55-216ENST00000366744 RARSP54136 660 aaKnown RBP11.7□□□□□ -0.54
MRPL55-216ENST00000366744 CXCL9Q07325 125 aa11.7□□□□□ -0.54
MRPL55-216ENST00000366744 NOB1Q9ULX3 412 aaKnown RBP11.7□□□□□ -0.54
MRPL55-216ENST00000366744 MINPP1Q9UNW1 487 aa11.7□□□□□ -0.54
MRPL55-216ENST00000366744 LEMD3Q9Y2U8 911 aa11.7□□□□□ -0.54
MRPL55-216ENST00000366744 UTYO14607 1347 aa11.69□□□□□ -0.54
MRPL55-216ENST00000366744 POTECB2RU33 542 aa11.69□□□□□ -0.54
MRPL55-216ENST00000366744 H7C1D1 291 aa11.69□□□□□ -0.54
MRPL55-216ENST00000366744 NBPF7P0C2Y1 421 aaPredicted RBP11.69□□□□□ -0.54
MRPL55-216ENST00000366744 RPS12P25398 132 aaKnown RBP11.69□□□□□ -0.54
MRPL55-216ENST00000366744 SCNN1DP51172 638 aa11.69□□□□□ -0.54
MRPL55-216ENST00000366744 BRPF1P55201 1214 aaPredicted RBP11.69□□□□□ -0.54
MRPL55-216ENST00000366744 FOXO4P98177 505 aa11.69□□□□□ -0.54
MRPL55-216ENST00000366744 DOK7Q18PE1 504 aa11.69□□□□□ -0.54
MRPL55-216ENST00000366744 FRAT1Q92837 279 aaPredicted RBP11.69□□□□□ -0.54
MRPL55-216ENST00000366744 GPR101Q96P66 508 aaPredicted RBP11.69□□□□□ -0.54
MRPL55-216ENST00000366744 ADARB2Q9NS39 739 aaKnown RBP11.69□□□□□ -0.54
MRPL55-216ENST00000366744 GPRC5DQ9NZD1 345 aa11.69□□□□□ -0.54
MRPL55-216ENST00000366744 ZNF804BA4D1E1 1349 aa11.68□□□□□ -0.54
MRPL55-216ENST00000366744 CHRNDQ07001 517 aa11.68□□□□□ -0.54
MRPL55-216ENST00000366744 LDHAL6AQ6ZMR3 332 aa11.68□□□□□ -0.54
MRPL55-216ENST00000366744 USP50Q70EL3 339 aaPredicted RBP11.68□□□□□ -0.54
MRPL55-216ENST00000366744 FTSJ3Q8IY81 847 aaKnown RBP11.68□□□□□ -0.54
MRPL55-216ENST00000366744 ARHGAP45Q92619 1136 aa11.68□□□□□ -0.54
MRPL55-216ENST00000366744 FBXW7Q969H0 707 aa11.68□□□□□ -0.54
MRPL55-216ENST00000366744 SUCLG2Q96I99 432 aa11.68□□□□□ -0.54
MRPL55-216ENST00000366744 BICC1Q9H694 974 aaKnown RBP11.68□□□□□ -0.54
MRPL55-216ENST00000366744 POLR2AP24928 1970 aaKnown RBP11.67□□□□□ -0.54
MRPL55-216ENST00000366744 YDJCA8MPS7 323 aa11.67□□□□□ -0.54
MRPL55-216ENST00000366744 PSMD14O00487 310 aa11.67□□□□□ -0.54
MRPL55-216ENST00000366744 ZNF804AQ7Z570 1209 aa11.67□□□□□ -0.54
MRPL55-216ENST00000366744 ZNF609O15014 1411 aa11.67□□□□□ -0.54
MRPL55-216ENST00000366744 MROH5Q6ZUA9 1318 aa11.66□□□□□ -0.54
MRPL55-216ENST00000366744 MYO3BQ8WXR4 1341 aa11.66□□□□□ -0.54
MRPL55-216ENST00000366744 EPS15P42566 896 aa11.66□□□□□ -0.54
MRPL55-216ENST00000366744 RABL6Q3YEC7 729 aaPredicted RBP11.66□□□□□ -0.54
MRPL55-216ENST00000366744 EPHA10Q5JZY3 1008 aa11.66□□□□□ -0.54
MRPL55-216ENST00000366744 ZKSCAN2Q63HK3 967 aa11.66□□□□□ -0.54
MRPL55-216ENST00000366744 ATF7IPQ6VMQ6 1270 aa11.66□□□□□ -0.54
MRPL55-216ENST00000366744 PODNQ7Z5L7 613 aa11.66□□□□□ -0.54
MRPL55-216ENST00000366744 MICALL2Q8IY33 904 aa11.66□□□□□ -0.54
MRPL55-216ENST00000366744 COA1Q9GZY4 146 aa11.66□□□□□ -0.54
MRPL55-216ENST00000366744 USP17L3A6NCW0 530 aa11.65□□□□□ -0.54
MRPL55-216ENST00000366744 USP17L4A6NCW7 530 aa11.65□□□□□ -0.54
MRPL55-216ENST00000366744 PLIN1O60240 522 aa11.65□□□□□ -0.54
MRPL55-216ENST00000366744 GNAI3P08754 354 aa11.65□□□□□ -0.54
MRPL55-216ENST00000366744 POTEIP0CG38 1075 aa11.65□□□□□ -0.54
MRPL55-216ENST00000366744 POTEJP0CG39 1038 aa11.65□□□□□ -0.54
MRPL55-216ENST00000366744 USP17L1Q7RTZ2 530 aa11.65□□□□□ -0.54
MRPL55-216ENST00000366744 DPF2Q92785 391 aa11.65□□□□□ -0.54
MRPL55-216ENST00000366744 ZNF594Q96JF6 807 aaPredicted RBP11.65□□□□□ -0.54
MRPL55-216ENST00000366744 USP44Q9H0E7 712 aa11.65□□□□□ -0.54
MRPL55-216ENST00000366744 CNOT7Q9UIV1 285 aaKnown RBP11.65□□□□□ -0.54
MRPL55-216ENST00000366744 METTL24Q5JXM2 366 aa11.64□□□□□ -0.55
MRPL55-216ENST00000366744 RSBN1LQ6PCB5 846 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms