RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 STX10O60499 249 aa13.03□□□□□ -0.32
NUDCD3-202ENST00000355451 GPTP24298 496 aa13.03□□□□□ -0.32
NUDCD3-202ENST00000355451 TTC30BQ8N4P2 665 aa13.03□□□□□ -0.32
NUDCD3-202ENST00000355451 ANO10Q9NW15 660 aa13.03□□□□□ -0.32
NUDCD3-202ENST00000355451 KRT5P13647 590 aa13.03□□□□□ -0.32
NUDCD3-202ENST00000355451 RBM27Q9P2N5 1060 aaKnown RBP13.03□□□□□ -0.32
NUDCD3-202ENST00000355451 PDCD7Q8N8D1 485 aaKnown RBP13.03□□□□□ -0.32
NUDCD3-202ENST00000355451 NBPF3Q9H094 633 aa13.03□□□□□ -0.32
NUDCD3-202ENST00000355451 BCAR3O75815 825 aa13.02□□□□□ -0.32
NUDCD3-202ENST00000355451 CRNKL1Q9BZJ0 848 aaKnown RBP13.02□□□□□ -0.32
NUDCD3-202ENST00000355451 GOLGA6BA6NDN3 693 aa13.02□□□□□ -0.32
NUDCD3-202ENST00000355451 KIF2AO00139 706 aaPredicted RBP13.02□□□□□ -0.32
NUDCD3-202ENST00000355451 CCDC25Q86WR0 208 aa13.02□□□□□ -0.32
NUDCD3-202ENST00000355451 TRIM47Q96LD4 638 aa13.02□□□□□ -0.32
NUDCD3-202ENST00000355451 PPP1R42Q7Z4L9 355 aa13.02□□□□□ -0.32
NUDCD3-202ENST00000355451 SPECC1L-ADORA2AF8WAN1 911 aa13.02□□□□□ -0.33
NUDCD3-202ENST00000355451 KRT9P35527 623 aa13.02□□□□□ -0.33
NUDCD3-202ENST00000355451 HS1BP3Q53T59 392 aa13.02□□□□□ -0.33
NUDCD3-202ENST00000355451 EAPPQ56P03 285 aaPredicted RBP13.02□□□□□ -0.33
NUDCD3-202ENST00000355451 HACE1Q8IYU2 909 aa13.02□□□□□ -0.33
NUDCD3-202ENST00000355451 SEC62Q99442 399 aaKnown RBP13.02□□□□□ -0.33
NUDCD3-202ENST00000355451 LMCD1Q9NZU5 365 aa13.02□□□□□ -0.33
NUDCD3-202ENST00000355451 FNDC3AQ9Y2H6 1198 aaKnown RBP13.02□□□□□ -0.33
NUDCD3-202ENST00000355451 PDE1CQ14123 709 aaPredicted RBP13.02□□□□□ -0.33
NUDCD3-202ENST00000355451 PPP1R7Q15435 360 aa13.02□□□□□ -0.33
NUDCD3-202ENST00000355451 NUTM1Q86Y26 1132 aa13.02□□□□□ -0.33
NUDCD3-202ENST00000355451 SELENOSQ9BQE4 189 aa13.02□□□□□ -0.33
NUDCD3-202ENST00000355451 CIB2O75838 187 aa13.01□□□□□ -0.33
NUDCD3-202ENST00000355451 CLUL1Q15846 466 aa13.01□□□□□ -0.33
NUDCD3-202ENST00000355451 CCDC94Q9BW85 323 aaPredicted RBP13.01□□□□□ -0.33
NUDCD3-202ENST00000355451 TMEM67Q5HYA8 995 aa13.01□□□□□ -0.33
NUDCD3-202ENST00000355451 SH2D4BQ5SQS7 431 aa13.01□□□□□ -0.33
NUDCD3-202ENST00000355451 PARP3Q9Y6F1 533 aa13.01□□□□□ -0.33
NUDCD3-202ENST00000355451 ZGPATQ8N5A5 531 aaKnown RBP13.01□□□□□ -0.33
NUDCD3-202ENST00000355451 USP25Q9UHP3 1055 aa13.01□□□□□ -0.33
NUDCD3-202ENST00000355451 RABGAP1Q9Y3P9 1069 aa13.01□□□□□ -0.33
NUDCD3-202ENST00000355451 SMIM23A6NLE4 172 aa13.01□□□□□ -0.33
NUDCD3-202ENST00000355451 STAT6P42226 847 aa13.01□□□□□ -0.33
NUDCD3-202ENST00000355451 TMEM132EQ6IEE7 984 aa13.01□□□□□ -0.33
NUDCD3-202ENST00000355451 HEATR3Q7Z4Q2 680 aa13.01□□□□□ -0.33
NUDCD3-202ENST00000355451 GCC1Q96CN9 775 aa13.01□□□□□ -0.33
NUDCD3-202ENST00000355451 MYD88Q99836 296 aa13.01□□□□□ -0.33
NUDCD3-202ENST00000355451 NOB1Q9ULX3 412 aaKnown RBP13.01□□□□□ -0.33
NUDCD3-202ENST00000355451 BICDL2A1A5D9 508 aa13□□□□□ -0.33
NUDCD3-202ENST00000355451 SETDB2Q96T68 719 aa13□□□□□ -0.33
NUDCD3-202ENST00000355451 EVI5LQ96CN4 794 aa13□□□□□ -0.33
NUDCD3-202ENST00000355451 CALCOCO2Q13137 446 aa13□□□□□ -0.33
NUDCD3-202ENST00000355451 MFSD6Q6ZSS7 791 aa13□□□□□ -0.33
NUDCD3-202ENST00000355451 STMN2Q93045 179 aa13□□□□□ -0.33
NUDCD3-202ENST00000355451 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13□□□□□ -0.33
NUDCD3-202ENST00000355451 GOLIM4O00461 696 aa13□□□□□ -0.33
NUDCD3-202ENST00000355451 FAM47CQ5HY64 1035 aa13□□□□□ -0.33
NUDCD3-202ENST00000355451 TNPO1Q92973 898 aaKnown RBP13□□□□□ -0.33
NUDCD3-202ENST00000355451 ATP2A3Q93084 1043 aa13□□□□□ -0.33
NUDCD3-202ENST00000355451 PNMA2Q9UL42 364 aa13□□□□□ -0.33
NUDCD3-202ENST00000355451 PHLDB2Q86SQ0 1253 aa13□□□□□ -0.33
NUDCD3-202ENST00000355451 FNBP1Q96RU3 617 aa13□□□□□ -0.33
NUDCD3-202ENST00000355451 KCNK9Q9NPC2 374 aa13□□□□□ -0.33
NUDCD3-202ENST00000355451 CNTLNQ9NXG0 1405 aa13□□□□□ -0.33
NUDCD3-202ENST00000355451 PALM3A6NDB9 673 aaPredicted RBP13□□□□□ -0.33
NUDCD3-202ENST00000355451 GPR162Q16538 588 aa13□□□□□ -0.33
NUDCD3-202ENST00000355451 POTEB2H3BUK9 544 aa12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 MAFGO15525 162 aa12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 EHBP1Q8NDI1 1231 aa12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 SPDYE1Q8NFV5 336 aaPredicted RBP12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 AKR1B10O60218 316 aa12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 BOLA2Q9H3K6 86 aa12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 GOLGA6CA6NDK9 693 aa12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 GOLGA6DP0CG33 693 aa12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 AAMPQ13685 434 aa12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 WDR44Q5JSH3 913 aa12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 GOLGA6AQ9NYA3 693 aa12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 RPS6KA2Q15349 733 aa12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 VCX3BQ9H321 246 aa12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 IL1RAPL2Q9NP60 686 aa12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 HNRNPCL2B2RXH8 293 aa12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 HNRNPCL1O60812 293 aaKnown RBP12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 CDAN1Q8IWY9 1227 aa12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 CDK19Q9BWU1 502 aa12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 HVCN1Q96D96 273 aa12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 RBM28Q9NW13 759 aaKnown RBP12.99□□□□□ -0.33
NUDCD3-202ENST00000355451 TRPC3Q13507 836 aa12.98□□□□□ -0.33
NUDCD3-202ENST00000355451 NBPF7P0C2Y1 421 aaPredicted RBP12.98□□□□□ -0.33
NUDCD3-202ENST00000355451 XPAP23025 273 aaPredicted RBP12.98□□□□□ -0.33
NUDCD3-202ENST00000355451 RBM46Q8TBY0 533 aaKnown RBP12.98□□□□□ -0.33
NUDCD3-202ENST00000355451 KIF9Q9HAQ2 790 aa12.98□□□□□ -0.33
NUDCD3-202ENST00000355451 OLA1Q9NTK5 396 aaKnown RBP12.98□□□□□ -0.33
NUDCD3-202ENST00000355451 MNAT1P51948 309 aa12.98□□□□□ -0.33
NUDCD3-202ENST00000355451 JPH4Q96JJ6 628 aa12.98□□□□□ -0.33
NUDCD3-202ENST00000355451 TRERF1Q96PN7 1200 aa12.98□□□□□ -0.33
NUDCD3-202ENST00000355451 FAM193BQ96PV7 902 aaPredicted RBP12.98□□□□□ -0.33
NUDCD3-202ENST00000355451 OCM2P0CE71 109 aa12.98□□□□□ -0.33
NUDCD3-202ENST00000355451 OCMP0CE72 109 aaPredicted RBP12.98□□□□□ -0.33
NUDCD3-202ENST00000355451 CASC4Q6P4E1 433 aa12.98□□□□□ -0.33
NUDCD3-202ENST00000355451 ZNF449Q6P9G9 518 aa12.98□□□□□ -0.33
NUDCD3-202ENST00000355451 BAG1Q99933 345 aaPredicted RBP12.98□□□□□ -0.33
NUDCD3-202ENST00000355451 SSFA2P28290 1259 aa12.98□□□□□ -0.33
NUDCD3-202ENST00000355451 C1orf228Q6PIY5 440 aa12.98□□□□□ -0.33
NUDCD3-202ENST00000355451 CARD10Q9BWT7 1032 aa12.98□□□□□ -0.33
NUDCD3-202ENST00000355451 RNF217Q8TC41 542 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms