RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 MFSD6Q6ZSS7 791 aa12.07□□□□□ -0.48
SMG7-201ENST00000347615 CACNA2D4Q7Z3S7 1137 aa12.07□□□□□ -0.48
SMG7-201ENST00000347615 UNC5CLQ8IV45 518 aa12.07□□□□□ -0.48
SMG7-201ENST00000347615 RHOXF2BP0C7M4 288 aa12.07□□□□□ -0.48
SMG7-201ENST00000347615 SPA17Q15506 151 aa12.07□□□□□ -0.48
SMG7-201ENST00000347615 KRT222Q8N1A0 295 aa12.07□□□□□ -0.48
SMG7-201ENST00000347615 RHOXF2Q9BQY4 288 aa12.07□□□□□ -0.48
SMG7-201ENST00000347615 CBX8Q9HC52 389 aa12.07□□□□□ -0.48
SMG7-201ENST00000347615 HMG20BQ9P0W2 317 aa12.07□□□□□ -0.48
SMG7-201ENST00000347615 ATP2C2O75185 946 aa12.06□□□□□ -0.48
SMG7-201ENST00000347615 SYCP1Q15431 976 aa12.06□□□□□ -0.48
SMG7-201ENST00000347615 MMRN2Q9H8L6 949 aa12.06□□□□□ -0.48
SMG7-201ENST00000347615 GOPCQ9HD26 462 aa12.06□□□□□ -0.48
SMG7-201ENST00000347615 ANKIB1Q9P2G1 1089 aa12.06□□□□□ -0.48
SMG7-201ENST00000347615 N4BP3O15049 544 aa12.06□□□□□ -0.48
SMG7-201ENST00000347615 MYO1BO43795 1136 aa12.06□□□□□ -0.48
SMG7-201ENST00000347615 PTH1RQ03431 593 aa12.06□□□□□ -0.48
SMG7-201ENST00000347615 MYL10Q9BUA6 226 aa12.06□□□□□ -0.48
SMG7-201ENST00000347615 CCDC171Q6TFL3 1326 aa12.06□□□□□ -0.48
SMG7-201ENST00000347615 ERCC3P19447 782 aa12.06□□□□□ -0.48
SMG7-201ENST00000347615 CTCFLQ8NI51 663 aaPredicted RBP12.06□□□□□ -0.48
SMG7-201ENST00000347615 RABEP2Q9H5N1 569 aa12.06□□□□□ -0.48
SMG7-201ENST00000347615 KIF2AO00139 706 aaPredicted RBP12.06□□□□□ -0.48
SMG7-201ENST00000347615 SPTLC2O15270 562 aa12.06□□□□□ -0.48
SMG7-201ENST00000347615 MTIF2P46199 727 aaKnown RBP12.06□□□□□ -0.48
SMG7-201ENST00000347615 DNAJC21Q5F1R6 531 aaKnown RBP12.06□□□□□ -0.48
SMG7-201ENST00000347615 RRAGBQ5VZM2 374 aa12.06□□□□□ -0.48
SMG7-201ENST00000347615 LONRF3Q496Y0 759 aa12.05□□□□□ -0.48
SMG7-201ENST00000347615 PPP1R1BQ9UD71 204 aaPredicted RBP12.05□□□□□ -0.48
SMG7-201ENST00000347615 DISP1Q96F81 1524 aa12.05□□□□□ -0.48
SMG7-201ENST00000347615 SNRPA1P09661 255 aaKnown RBP12.05□□□□□ -0.48
SMG7-201ENST00000347615 TERF1P54274 439 aa12.05□□□□□ -0.48
SMG7-201ENST00000347615 RNF187Q5TA31 235 aaPredicted RBP12.05□□□□□ -0.48
SMG7-201ENST00000347615 NPATQ14207 1427 aa12.05□□□□□ -0.48
SMG7-201ENST00000347615 ZBTB43O43298 467 aa12.05□□□□□ -0.48
SMG7-201ENST00000347615 SSR1P43307 286 aaKnown RBP12.05□□□□□ -0.48
SMG7-201ENST00000347615 IFNL2Q8IZJ0 200 aa12.05□□□□□ -0.48
SMG7-201ENST00000347615 GPATCH11Q8N954 259 aa12.05□□□□□ -0.48
SMG7-201ENST00000347615 ACSBG1Q96GR2 724 aa12.05□□□□□ -0.48
SMG7-201ENST00000347615 DBNDD2Q9BQY9 259 aa12.05□□□□□ -0.48
SMG7-201ENST00000347615 IPO4Q8TEX9 1081 aaKnown RBP12.05□□□□□ -0.48
SMG7-201ENST00000347615 SEC62Q99442 399 aaKnown RBP12.05□□□□□ -0.48
SMG7-201ENST00000347615 MAPK8IP1Q9UQF2 711 aa12.05□□□□□ -0.48
SMG7-201ENST00000347615 NEFHP12036 1026 aa12.04□□□□□ -0.48
SMG7-201ENST00000347615 SLC5A1P13866 664 aa12.04□□□□□ -0.48
SMG7-201ENST00000347615 BMS1Q14692 1282 aaKnown RBP12.04□□□□□ -0.48
SMG7-201ENST00000347615 ELF2Q15723 593 aa12.04□□□□□ -0.48
SMG7-201ENST00000347615 ME3Q16798 604 aa12.04□□□□□ -0.48
SMG7-201ENST00000347615 TMEM132AQ24JP5 1023 aa12.04□□□□□ -0.48
SMG7-201ENST00000347615 DZIP1Q86YF9 867 aaKnown RBP12.04□□□□□ -0.48
SMG7-201ENST00000347615 UIMC1Q96RL1 719 aa12.04□□□□□ -0.48
SMG7-201ENST00000347615 KDM5CP41229 1560 aa12.04□□□□□ -0.48
SMG7-201ENST00000347615 ZNF76P36508 570 aa12.04□□□□□ -0.48
SMG7-201ENST00000347615 ZNF445P59923 1031 aa12.04□□□□□ -0.48
SMG7-201ENST00000347615 ZNF397Q8NF99 534 aaPredicted RBP12.04□□□□□ -0.48
SMG7-201ENST00000347615 SLC4A4Q9Y6R1 1079 aa12.04□□□□□ -0.48
SMG7-201ENST00000347615 HOXC9P31274 260 aa12.04□□□□□ -0.48
SMG7-201ENST00000347615 CAVIN4Q5BKX8 364 aa12.04□□□□□ -0.48
SMG7-201ENST00000347615 IQCA1Q86XH1 822 aa12.04□□□□□ -0.48
SMG7-201ENST00000347615 INTS4Q96HW7 963 aaKnown RBP12.04□□□□□ -0.48
SMG7-201ENST00000347615 ANTXR1Q9H6X2 564 aa12.04□□□□□ -0.48
SMG7-201ENST00000347615 PTPRTO14522 1441 aa12.04□□□□□ -0.48
SMG7-201ENST00000347615 CCDC194A0A1B0GVG4 234 aa12.04□□□□□ -0.48
SMG7-201ENST00000347615 ANKRD62A6NC57 917 aa12.04□□□□□ -0.48
SMG7-201ENST00000347615 NEMFO60524 1076 aa12.04□□□□□ -0.48
SMG7-201ENST00000347615 CATIPQ7Z7H3 387 aa12.04□□□□□ -0.48
SMG7-201ENST00000347615 DENND4BO75064 1496 aaPredicted RBP12.04□□□□□ -0.48
SMG7-201ENST00000347615 hCG_1642624A0A1W2PR95 340 aa12.03□□□□□ -0.48
SMG7-201ENST00000347615 SLU7O95391 586 aaKnown RBP12.03□□□□□ -0.48
SMG7-201ENST00000347615 ARID5AQ03989 594 aa12.03□□□□□ -0.48
SMG7-201ENST00000347615 CTR9Q6PD62 1173 aa12.03□□□□□ -0.48
SMG7-201ENST00000347615 CCDC150Q8NCX0 1101 aa12.03□□□□□ -0.48
SMG7-201ENST00000347615 RSPH14Q9UHP6 348 aa12.03□□□□□ -0.48
SMG7-201ENST00000347615 ASXL2Q76L83 1435 aa12.03□□□□□ -0.48
SMG7-201ENST00000347615 TSPY2A6NKD2 308 aa12.03□□□□□ -0.48
SMG7-201ENST00000347615 YEATS4O95619 227 aa12.03□□□□□ -0.48
SMG7-201ENST00000347615 RPS6KB1P23443 525 aa12.03□□□□□ -0.48
SMG7-201ENST00000347615 SUCLG2Q96I99 432 aa12.03□□□□□ -0.48
SMG7-201ENST00000347615 ADAMTS12P58397 1594 aa12.03□□□□□ -0.48
SMG7-201ENST00000347615 SGSM2O43147 1006 aa12.03□□□□□ -0.48
SMG7-201ENST00000347615 CCT6AP40227 531 aaKnown RBP12.03□□□□□ -0.48
SMG7-201ENST00000347615 TAF4BQ92750 862 aa12.03□□□□□ -0.48
SMG7-201ENST00000347615 DDX17Q92841 729 aaKnown RBP12.03□□□□□ -0.48
SMG7-201ENST00000347615 HLTFQ14527 1009 aaKnown RBP eCLIP12.03□□□□□ -0.48
SMG7-201ENST00000347615 WTAPQ15007 396 aa12.03□□□□□ -0.48
SMG7-201ENST00000347615 PRPF4BQ13523 1007 aaKnown RBP12.02□□□□□ -0.48
SMG7-201ENST00000347615 TRMT2AQ8IZ69 625 aaKnown RBP12.02□□□□□ -0.49
SMG7-201ENST00000347615 SEC63Q9UGP8 760 aaKnown RBP12.02□□□□□ -0.49
SMG7-201ENST00000347615 STX8Q9UNK0 236 aa12.02□□□□□ -0.49
SMG7-201ENST00000347615 PDIA4P13667 645 aaKnown RBP12.02□□□□□ -0.49
SMG7-201ENST00000347615 PHKBQ93100 1093 aa12.02□□□□□ -0.49
SMG7-201ENST00000347615 TRIM47Q96LD4 638 aa12.02□□□□□ -0.49
SMG7-201ENST00000347615 NRBP1Q9UHY1 535 aa12.02□□□□□ -0.49
SMG7-201ENST00000347615 GUCA1BQ9UMX6 200 aa12.02□□□□□ -0.49
SMG7-201ENST00000347615 CHL1O00533 1208 aa12.02□□□□□ -0.49
SMG7-201ENST00000347615 ATP2B3Q16720 1220 aa12.02□□□□□ -0.49
SMG7-201ENST00000347615 SMARCC1Q92922 1105 aaPredicted RBP12.02□□□□□ -0.49
SMG7-201ENST00000347615 VPS18Q9P253 973 aa12.02□□□□□ -0.49
SMG7-201ENST00000347615 MAP3K5Q99683 1374 aa12.02□□□□□ -0.49
SMG7-201ENST00000347615 CCDC196A0A1B0GTZ2 297 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms