RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 NEFMP07197 916 aa21.56■■□□□ 1.04
NECTIN1-202ENST00000340882 MOB2Q70IA6 237 aa21.56■■□□□ 1.04
NECTIN1-202ENST00000340882 SULF1Q8IWU6 871 aa21.56■■□□□ 1.04
NECTIN1-202ENST00000340882 VIL1P09327 827 aaKnown RBP21.55■■□□□ 1.04
NECTIN1-202ENST00000340882 FAM89AQ96GI7 184 aa21.55■■□□□ 1.04
NECTIN1-202ENST00000340882 SCAF8Q9UPN6 1271 aaKnown RBP21.55■■□□□ 1.04
NECTIN1-202ENST00000340882 PAPPA2Q9BXP8 1791 aa21.54■■□□□ 1.04
NECTIN1-202ENST00000340882 TBC1D8O95759 1140 aa21.54■■□□□ 1.04
NECTIN1-202ENST00000340882 ANGEL2Q5VTE6 544 aaKnown RBP21.54■■□□□ 1.04
NECTIN1-202ENST00000340882 TBC1D16Q8TBP0 767 aa21.54■■□□□ 1.04
NECTIN1-202ENST00000340882 SF3B3Q15393 1217 aaKnown RBP21.53■■□□□ 1.04
NECTIN1-202ENST00000340882 KRT24Q2M2I5 525 aa21.53■■□□□ 1.04
NECTIN1-202ENST00000340882 ZNF296Q8WUU4 475 aaPredicted RBP21.53■■□□□ 1.04
NECTIN1-202ENST00000340882 SCARF1Q14162 830 aa21.52■■□□□ 1.04
NECTIN1-202ENST00000340882 RTL5Q5HYW3 569 aaPredicted RBP21.52■■□□□ 1.04
NECTIN1-202ENST00000340882 MKI67P46013 3256 aaKnown RBP21.5■■□□□ 1.03
NECTIN1-202ENST00000340882 ATP5J2-PTCD1G3V325 749 aa21.5■■□□□ 1.03
NECTIN1-202ENST00000340882 ZNF280AP59817 542 aaPredicted RBP21.5■■□□□ 1.03
NECTIN1-202ENST00000340882 EYA3Q99504 573 aa21.5■■□□□ 1.03
NECTIN1-202ENST00000340882 ISCA1Q9BUE6 129 aa21.5■■□□□ 1.03
NECTIN1-202ENST00000340882 UBE2Q2LH0YL09 131 aa21.49■■□□□ 1.03
NECTIN1-202ENST00000340882 PRAMEF18Q5VWM3 479 aa21.49■■□□□ 1.03
NECTIN1-202ENST00000340882 REM2Q8IYK8 340 aaPredicted RBP21.49■■□□□ 1.03
NECTIN1-202ENST00000340882 HDAC9Q9UKV0 1011 aa21.49■■□□□ 1.03
NECTIN1-202ENST00000340882 MAPK8IP3Q9UPT6 1336 aa21.49■■□□□ 1.03
NECTIN1-202ENST00000340882 RIPK4P57078 832 aa21.48■■□□□ 1.03
NECTIN1-202ENST00000340882 PKN2Q16513 984 aaKnown RBP21.48■■□□□ 1.03
NECTIN1-202ENST00000340882 ZC3H12CQ9C0D7 883 aaKnown RBP21.48■■□□□ 1.03
NECTIN1-202ENST00000340882 CHPF2Q9P2E5 772 aa21.48■■□□□ 1.03
NECTIN1-202ENST00000340882 ZNF646O15015 1829 aaPredicted RBP21.48■■□□□ 1.03
NECTIN1-202ENST00000340882 RPS8P62241 208 aaKnown RBP21.47■■□□□ 1.03
NECTIN1-202ENST00000340882 RSBN1LQ6PCB5 846 aaPredicted RBP21.47■■□□□ 1.03
NECTIN1-202ENST00000340882 GMLQ99445 158 aa21.47■■□□□ 1.03
NECTIN1-202ENST00000340882 R3HDMLQ9H3Y0 253 aa21.47■■□□□ 1.03
NECTIN1-202ENST00000340882 SEC31BQ9NQW1 1179 aa21.47■■□□□ 1.03
NECTIN1-202ENST00000340882 HTTP42858 3142 aa21.46■■□□□ 1.03
NECTIN1-202ENST00000340882 ZNF609O15014 1411 aa21.46■■□□□ 1.03
NECTIN1-202ENST00000340882 FKBP1BP68106 108 aa21.46■■□□□ 1.03
NECTIN1-202ENST00000340882 PLBD2Q8NHP8 589 aa21.46■■□□□ 1.03
NECTIN1-202ENST00000340882 PODXL2Q9NZ53 605 aa21.46■■□□□ 1.03
NECTIN1-202ENST00000340882 GPR25O00155 361 aa21.45■■□□□ 1.02
NECTIN1-202ENST00000340882 UFL1O94874 794 aa21.45■■□□□ 1.02
NECTIN1-202ENST00000340882 MKRN3Q13064 507 aaKnown RBP21.45■■□□□ 1.02
NECTIN1-202ENST00000340882 MYOZ2Q9NPC6 264 aa21.45■■□□□ 1.02
NECTIN1-202ENST00000340882 BABAM1Q9NWV8 329 aa21.45■■□□□ 1.02
NECTIN1-202ENST00000340882 IRS4O14654 1257 aaPredicted RBP21.44■■□□□ 1.02
NECTIN1-202ENST00000340882 TM4SF4P48230 202 aa21.44■■□□□ 1.02
NECTIN1-202ENST00000340882 ANKRD13DQ6ZTN6 518 aa21.44■■□□□ 1.02
NECTIN1-202ENST00000340882 AGBL3Q8NEM8 1001 aa21.44■■□□□ 1.02
NECTIN1-202ENST00000340882 FBXO46Q6PJ61 603 aaPredicted RBP21.43■■□□□ 1.02
NECTIN1-202ENST00000340882 CENPFP49454 3210 aa21.43■■□□□ 1.02
NECTIN1-202ENST00000340882 WTIPA6NIX2 430 aaPredicted RBP21.42■■□□□ 1.02
NECTIN1-202ENST00000340882 G3V3G9 751 aa21.42■■□□□ 1.02
NECTIN1-202ENST00000340882 USP17L8P0C7I0 530 aa21.42■■□□□ 1.02
NECTIN1-202ENST00000340882 NBPF9Q3BBW0 867 aa21.42■■□□□ 1.02
NECTIN1-202ENST00000340882 DCAF8Q5TAQ9 597 aa21.42■■□□□ 1.02
NECTIN1-202ENST00000340882 PITPNM2Q9BZ72 1349 aa21.42■■□□□ 1.02
NECTIN1-202ENST00000340882 ANKIB1Q9P2G1 1089 aa21.42■■□□□ 1.02
NECTIN1-202ENST00000340882 GGA1Q9UJY5 639 aa21.42■■□□□ 1.02
NECTIN1-202ENST00000340882 TMPOP42166 694 aaKnown RBP21.41■■□□□ 1.02
NECTIN1-202ENST00000340882 CHL1O00533 1208 aa21.4■■□□□ 1.02
NECTIN1-202ENST00000340882 NOM1Q5C9Z4 860 aaKnown RBP21.4■■□□□ 1.02
NECTIN1-202ENST00000340882 HABP4Q5JVS0 413 aaKnown RBP21.4■■□□□ 1.02
NECTIN1-202ENST00000340882 MXD3Q9BW11 206 aa21.4■■□□□ 1.02
NECTIN1-202ENST00000340882 PNNQ9H307 717 aaKnown RBP21.4■■□□□ 1.02
NECTIN1-202ENST00000340882 SPEF2Q9C093 1822 aa21.4■■□□□ 1.02
NECTIN1-202ENST00000340882 HDGFL1Q5TGJ6 251 aa21.39■■□□□ 1.01
NECTIN1-202ENST00000340882 TRIM28Q13263 835 aaKnown RBP21.38■■□□□ 1.01
NECTIN1-202ENST00000340882 TTLL12Q14166 644 aaPredicted RBP21.38■■□□□ 1.01
NECTIN1-202ENST00000340882 JARID2Q92833 1246 aaPredicted RBP21.38■■□□□ 1.01
NECTIN1-202ENST00000340882 CCDC85AQ96PX6 553 aaPredicted RBP21.38■■□□□ 1.01
NECTIN1-202ENST00000340882 POTEFA5A3E0 1075 aa21.37■■□□□ 1.01
NECTIN1-202ENST00000340882 USP17L3A6NCW0 530 aa21.37■■□□□ 1.01
NECTIN1-202ENST00000340882 USP17L4A6NCW7 530 aa21.37■■□□□ 1.01
NECTIN1-202ENST00000340882 FKTNO75072 461 aa21.37■■□□□ 1.01
NECTIN1-202ENST00000340882 PTPN12Q05209 780 aaKnown RBP21.37■■□□□ 1.01
NECTIN1-202ENST00000340882 USP17L1Q7RTZ2 530 aa21.37■■□□□ 1.01
NECTIN1-202ENST00000340882 LAS1LQ9Y4W2 734 aaKnown RBP21.37■■□□□ 1.01
NECTIN1-202ENST00000340882 BRCA2P51587 3418 aa21.37■■□□□ 1.01
NECTIN1-202ENST00000340882 GCC1Q96CN9 775 aa21.36■■□□□ 1.01
NECTIN1-202ENST00000340882 CFHR5Q9BXR6 569 aa21.36■■□□□ 1.01
NECTIN1-202ENST00000340882 RBBP6Q7Z6E9 1792 aaKnown RBP21.36■■□□□ 1.01
NECTIN1-202ENST00000340882 KIAA0100Q14667 2235 aaKnown RBP21.35■■□□□ 1.01
NECTIN1-202ENST00000340882 PRKG1Q13976 671 aa21.35■■□□□ 1.01
NECTIN1-202ENST00000340882 NEUROD2Q15784 382 aa21.35■■□□□ 1.01
NECTIN1-202ENST00000340882 ZBTB38Q8NAP3 1195 aaPredicted RBP21.35■■□□□ 1.01
NECTIN1-202ENST00000340882 DBF4Q9UBU7 674 aaPredicted RBP21.35■■□□□ 1.01
NECTIN1-202ENST00000340882 FZD1Q9UP38 647 aa21.35■■□□□ 1.01
NECTIN1-202ENST00000340882 WNT10BO00744 389 aa21.34■■□□□ 1.01
NECTIN1-202ENST00000340882 XDHP47989 1333 aa21.33■■□□□ 1.01
NECTIN1-202ENST00000340882 DACT2Q5SW24 774 aa21.33■■□□□ 1.01
NECTIN1-202ENST00000340882 PODNQ7Z5L7 613 aa21.33■■□□□ 1.01
NECTIN1-202ENST00000340882 TRIM35Q9UPQ4 493 aa21.33■■□□□ 1.01
NECTIN1-202ENST00000340882 LAMB1P07942 1786 aa21.33■■□□□ 1
NECTIN1-202ENST00000340882 SASH1O94885 1247 aa21.32■■□□□ 1
NECTIN1-202ENST00000340882 LMOD3Q0VAK6 560 aa21.32■■□□□ 1
NECTIN1-202ENST00000340882 SREBF2Q12772 1141 aa21.32■■□□□ 1
NECTIN1-202ENST00000340882 CCDC146Q8IYE0 955 aa21.32■■□□□ 1
NECTIN1-202ENST00000340882 PHAXQ9H814 394 aaKnown RBP21.32■■□□□ 1
NECTIN1-202ENST00000340882 HYPKQ9NX55 129 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms