RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 PTPRCP08575 1304 aa16.93■□□□□ 0.3
SIRPB3P-201ENST00000340424 C6orf229H3BNL8 230 aa16.92■□□□□ 0.3
SIRPB3P-201ENST00000340424 ALDH1L1O75891 902 aa16.92■□□□□ 0.3
SIRPB3P-201ENST00000340424 DIEXFQ68CQ4 756 aaKnown RBP16.92■□□□□ 0.3
SIRPB3P-201ENST00000340424 TBC1D16Q8TBP0 767 aa16.92■□□□□ 0.3
SIRPB3P-201ENST00000340424 BSDC1Q9NW68 430 aaPredicted RBP16.92■□□□□ 0.3
SIRPB3P-201ENST00000340424 ANKIB1Q9P2G1 1089 aa16.92■□□□□ 0.3
SIRPB3P-201ENST00000340424 GGA1Q9UJY5 639 aa16.92■□□□□ 0.3
SIRPB3P-201ENST00000340424 F6X3S4 739 aa16.91■□□□□ 0.3
SIRPB3P-201ENST00000340424 CXCL9Q07325 125 aa16.91■□□□□ 0.3
SIRPB3P-201ENST00000340424 ALDH1L2Q3SY69 923 aa16.91■□□□□ 0.3
SIRPB3P-201ENST00000340424 CIAPIN1Q6FI81 312 aa16.91■□□□□ 0.3
SIRPB3P-201ENST00000340424 TRMT2AQ8IZ69 625 aaKnown RBP16.91■□□□□ 0.3
SIRPB3P-201ENST00000340424 CCDC85AQ96PX6 553 aaPredicted RBP16.91■□□□□ 0.3
SIRPB3P-201ENST00000340424 GREM2Q9H772 168 aa16.91■□□□□ 0.3
SIRPB3P-201ENST00000340424 POLLQ9UGP5 575 aa16.91■□□□□ 0.3
SIRPB3P-201ENST00000340424 ADAMTSL1Q8N6G6 1762 aa16.91■□□□□ 0.3
SIRPB3P-201ENST00000340424 XDHP47989 1333 aa16.91■□□□□ 0.3
SIRPB3P-201ENST00000340424 CSF1RP07333 972 aa16.9■□□□□ 0.3
SIRPB3P-201ENST00000340424 IGHMBP2P38935 993 aaKnown RBP16.9■□□□□ 0.3
SIRPB3P-201ENST00000340424 SCNN1DP51172 638 aa16.9■□□□□ 0.3
SIRPB3P-201ENST00000340424 ZC3H12CQ9C0D7 883 aaKnown RBP16.9■□□□□ 0.3
SIRPB3P-201ENST00000340424 SRCIN1Q9C0H9 1055 aa16.9■□□□□ 0.3
SIRPB3P-201ENST00000340424 GRM8O00222 908 aa16.89■□□□□ 0.29
SIRPB3P-201ENST00000340424 UFL1O94874 794 aa16.89■□□□□ 0.29
SIRPB3P-201ENST00000340424 ATP2B4P23634 1241 aa16.89■□□□□ 0.29
SIRPB3P-201ENST00000340424 EAPPQ56P03 285 aaPredicted RBP16.89■□□□□ 0.29
SIRPB3P-201ENST00000340424 USP50Q70EL3 339 aaPredicted RBP16.89■□□□□ 0.29
SIRPB3P-201ENST00000340424 MRPL50Q8N5N7 158 aaKnown RBP16.89■□□□□ 0.29
SIRPB3P-201ENST00000340424 ITGA6P23229 1130 aa16.88■□□□□ 0.29
SIRPB3P-201ENST00000340424 C9orf78Q9NZ63 289 aaPredicted RBP16.88■□□□□ 0.29
SIRPB3P-201ENST00000340424 GPRC5DQ9NZD1 345 aa16.88■□□□□ 0.29
SIRPB3P-201ENST00000340424 POTEIP0CG38 1075 aa16.87■□□□□ 0.29
SIRPB3P-201ENST00000340424 POTEJP0CG39 1038 aa16.87■□□□□ 0.29
SIRPB3P-201ENST00000340424 FAM161AQ3B820 660 aa16.87■□□□□ 0.29
SIRPB3P-201ENST00000340424 SLC4A10Q6U841 1118 aa16.87■□□□□ 0.29
SIRPB3P-201ENST00000340424 SSH1Q8WYL5 1049 aa16.87■□□□□ 0.29
SIRPB3P-201ENST00000340424 CDCA7LQ96GN5 454 aa16.87■□□□□ 0.29
SIRPB3P-201ENST00000340424 MPHOSPH8Q99549 860 aa16.87■□□□□ 0.29
SIRPB3P-201ENST00000340424 ADARB2Q9NS39 739 aaKnown RBP16.87■□□□□ 0.29
SIRPB3P-201ENST00000340424 MINPP1Q9UNW1 487 aa16.87■□□□□ 0.29
SIRPB3P-201ENST00000340424 ANKRD18BA2A2Z9 1011 aa16.86■□□□□ 0.29
SIRPB3P-201ENST00000340424 YDJCA8MPS7 323 aa16.86■□□□□ 0.29
SIRPB3P-201ENST00000340424 RIMBP2O15034 1052 aa16.86■□□□□ 0.29
SIRPB3P-201ENST00000340424 ECE2O60344 883 aa16.86■□□□□ 0.29
SIRPB3P-201ENST00000340424 RAD17O75943 681 aa16.86■□□□□ 0.29
SIRPB3P-201ENST00000340424 RPS12P25398 132 aaKnown RBP16.86■□□□□ 0.29
SIRPB3P-201ENST00000340424 GMPSP49915 693 aaPredicted RBP16.86■□□□□ 0.29
SIRPB3P-201ENST00000340424 DNAJC5GQ8N7S2 189 aa16.86■□□□□ 0.29
SIRPB3P-201ENST00000340424 BCL2L13Q9BXK5 485 aa16.86■□□□□ 0.29
SIRPB3P-201ENST00000340424 ANKRD2Q9GZV1 360 aa16.86■□□□□ 0.29
SIRPB3P-201ENST00000340424 DBNDD1Q9H9R9 158 aa16.86■□□□□ 0.29
SIRPB3P-201ENST00000340424 CLEC11AQ9Y240 323 aa16.86■□□□□ 0.29
SIRPB3P-201ENST00000340424 MED23Q9ULK4 1368 aa16.86■□□□□ 0.29
SIRPB3P-201ENST00000340424 G3V3G9 751 aa16.85■□□□□ 0.29
SIRPB3P-201ENST00000340424 EPS15P42566 896 aa16.85■□□□□ 0.29
SIRPB3P-201ENST00000340424 FOXO4P98177 505 aa16.85■□□□□ 0.29
SIRPB3P-201ENST00000340424 IFIT5Q13325 482 aaKnown RBP16.85■□□□□ 0.29
SIRPB3P-201ENST00000340424 DCAF8Q5TAQ9 597 aa16.85■□□□□ 0.29
SIRPB3P-201ENST00000340424 DPF2Q92785 391 aa16.85■□□□□ 0.29
SIRPB3P-201ENST00000340424 SMC4Q9NTJ3 1288 aa16.85■□□□□ 0.29
SIRPB3P-201ENST00000340424 PASKQ96RG2 1323 aa16.85■□□□□ 0.29
SIRPB3P-201ENST00000340424 SPEF2Q9C093 1822 aa16.84■□□□□ 0.29
SIRPB3P-201ENST00000340424 BRPF1P55201 1214 aaPredicted RBP16.84■□□□□ 0.29
SIRPB3P-201ENST00000340424 KLRG1Q96E93 195 aa16.84■□□□□ 0.29
SIRPB3P-201ENST00000340424 CREBZFQ9NS37 354 aa16.84■□□□□ 0.29
SIRPB3P-201ENST00000340424 LEMD3Q9Y2U8 911 aa16.84■□□□□ 0.29
SIRPB3P-201ENST00000340424 UTYO14607 1347 aa16.84■□□□□ 0.29
SIRPB3P-201ENST00000340424 ZNF609O15014 1411 aa16.84■□□□□ 0.29
SIRPB3P-201ENST00000340424 H7C1D1 291 aa16.83■□□□□ 0.28
SIRPB3P-201ENST00000340424 PSMD14O00487 310 aa16.83■□□□□ 0.28
SIRPB3P-201ENST00000340424 ITGBL1O95965 494 aaPredicted RBP16.83■□□□□ 0.28
SIRPB3P-201ENST00000340424 CCT4P50991 539 aaKnown RBP16.83■□□□□ 0.28
SIRPB3P-201ENST00000340424 DOK7Q18PE1 504 aa16.83■□□□□ 0.28
SIRPB3P-201ENST00000340424 CCDC57Q2TAC2 916 aa16.83■□□□□ 0.28
SIRPB3P-201ENST00000340424 PODNQ7Z5L7 613 aa16.83■□□□□ 0.28
SIRPB3P-201ENST00000340424 MIER1Q8N108 512 aa16.83■□□□□ 0.28
SIRPB3P-201ENST00000340424 CNTROBQ8N137 903 aa16.83■□□□□ 0.28
SIRPB3P-201ENST00000340424 ZC3H15Q8WU90 426 aaKnown RBP16.83■□□□□ 0.28
SIRPB3P-201ENST00000340424 SPDYE2BA6NHP3 402 aa16.82■□□□□ 0.28
SIRPB3P-201ENST00000340424 SPDYE6P0CI01 402 aa16.82■□□□□ 0.28
SIRPB3P-201ENST00000340424 SPDYE2Q495Y8 402 aa16.82■□□□□ 0.28
SIRPB3P-201ENST00000340424 LMBR1LQ6UX01 489 aa16.82■□□□□ 0.28
SIRPB3P-201ENST00000340424 CHMP3Q9Y3E7 222 aa16.82■□□□□ 0.28
SIRPB3P-201ENST00000340424 VIL1P09327 827 aaKnown RBP16.81■□□□□ 0.28
SIRPB3P-201ENST00000340424 GPR101Q96P66 508 aaPredicted RBP16.81■□□□□ 0.28
SIRPB3P-201ENST00000340424 CNOT7Q9UIV1 285 aaKnown RBP16.81■□□□□ 0.28
SIRPB3P-201ENST00000340424 PSME4Q14997 1843 aa16.8■□□□□ 0.28
SIRPB3P-201ENST00000340424 ZNF804BA4D1E1 1349 aa16.8■□□□□ 0.28
SIRPB3P-201ENST00000340424 HTRA3P83110 453 aa16.8■□□□□ 0.28
SIRPB3P-201ENST00000340424 TAF7LQ5H9L4 462 aa16.8■□□□□ 0.28
SIRPB3P-201ENST00000340424 MAP1SQ66K74 1059 aaPredicted RBP16.8■□□□□ 0.28
SIRPB3P-201ENST00000340424 MICALL2Q8IY33 904 aa16.8■□□□□ 0.28
SIRPB3P-201ENST00000340424 AGBL3Q8NEM8 1001 aa16.8■□□□□ 0.28
SIRPB3P-201ENST00000340424 KIF16BQ96L93 1317 aa16.79■□□□□ 0.28
SIRPB3P-201ENST00000340424 TMEM88BA6NKF7 163 aa16.79■□□□□ 0.28
SIRPB3P-201ENST00000340424 NBPF7P0C2Y1 421 aaPredicted RBP16.79■□□□□ 0.28
SIRPB3P-201ENST00000340424 KCNJ4P48050 445 aa16.79■□□□□ 0.28
SIRPB3P-201ENST00000340424 CHRNDQ07001 517 aa16.79■□□□□ 0.28
SIRPB3P-201ENST00000340424 JMYQ8N9B5 988 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms