RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 SIL1Q9H173 461 aa17.51■□□□□ 0.39
APOBEC3B-202ENST00000335760 LRRC37AA6NMS7 1700 aa17.5■□□□□ 0.39
APOBEC3B-202ENST00000335760 EYA2O00167 538 aa17.5■□□□□ 0.39
APOBEC3B-202ENST00000335760 CCDC93Q567U6 631 aa17.5■□□□□ 0.39
APOBEC3B-202ENST00000335760 CC2D2BQ6DHV5 1058 aa17.5■□□□□ 0.39
APOBEC3B-202ENST00000335760 MINPP1Q9UNW1 487 aa17.5■□□□□ 0.39
APOBEC3B-202ENST00000335760 GPSM2P81274 684 aa17.49■□□□□ 0.39
APOBEC3B-202ENST00000335760 RIPOR2Q9Y4F9 1068 aa17.49■□□□□ 0.39
APOBEC3B-202ENST00000335760 SURF6O75683 361 aaKnown RBP17.48■□□□□ 0.39
APOBEC3B-202ENST00000335760 CIAO1O76071 339 aa17.48■□□□□ 0.39
APOBEC3B-202ENST00000335760 CHRNDQ07001 517 aa17.48■□□□□ 0.39
APOBEC3B-202ENST00000335760 G3BP1Q13283 466 aaKnown RBP eCLIP17.48■□□□□ 0.39
APOBEC3B-202ENST00000335760 RTKN2Q8IZC4 609 aa17.48■□□□□ 0.39
APOBEC3B-202ENST00000335760 ANKIB1Q9P2G1 1089 aa17.48■□□□□ 0.39
APOBEC3B-202ENST00000335760 FBXO3Q9UK99 471 aa17.48■□□□□ 0.39
APOBEC3B-202ENST00000335760 NSFL1CQ9UNZ2 370 aaKnown RBP17.48■□□□□ 0.39
APOBEC3B-202ENST00000335760 MROH5Q6ZUA9 1318 aa17.47■□□□□ 0.39
APOBEC3B-202ENST00000335760 GRIPAP1Q4V328 841 aa17.47■□□□□ 0.39
APOBEC3B-202ENST00000335760 METTL24Q5JXM2 366 aa17.47■□□□□ 0.39
APOBEC3B-202ENST00000335760 DPP8Q6V1X1 898 aaPredicted RBP17.47■□□□□ 0.39
APOBEC3B-202ENST00000335760 ARHGAP27Q6ZUM4 889 aa17.47■□□□□ 0.39
APOBEC3B-202ENST00000335760 ATG9AQ7Z3C6 839 aa17.47■□□□□ 0.39
APOBEC3B-202ENST00000335760 MPNDQ8N594 471 aa17.47■□□□□ 0.39
APOBEC3B-202ENST00000335760 HELBQ8NG08 1087 aaPredicted RBP17.47■□□□□ 0.39
APOBEC3B-202ENST00000335760 ANKRD2Q9GZV1 360 aa17.47■□□□□ 0.39
APOBEC3B-202ENST00000335760 DCAF8L1A6NGE4 600 aa17.46■□□□□ 0.39
APOBEC3B-202ENST00000335760 IL15P40933 162 aaPredicted RBP17.46■□□□□ 0.39
APOBEC3B-202ENST00000335760 OS9Q13438 667 aaPredicted RBP17.46■□□□□ 0.39
APOBEC3B-202ENST00000335760 NOP58Q9Y2X3 529 aaKnown RBP17.46■□□□□ 0.39
APOBEC3B-202ENST00000335760 GOLGB1Q14789 3259 aaKnown RBP17.46■□□□□ 0.39
APOBEC3B-202ENST00000335760 SNED1Q8TER0 1413 aa17.46■□□□□ 0.39
APOBEC3B-202ENST00000335760 XDHP47989 1333 aa17.45■□□□□ 0.38
APOBEC3B-202ENST00000335760 GRIN3BO60391 1043 aa17.45■□□□□ 0.38
APOBEC3B-202ENST00000335760 TAF5LO75529 589 aa17.45■□□□□ 0.38
APOBEC3B-202ENST00000335760 PODXL2Q9NZ53 605 aa17.45■□□□□ 0.38
APOBEC3B-202ENST00000335760 EXOC6BQ9Y2D4 811 aa17.45■□□□□ 0.38
APOBEC3B-202ENST00000335760 A0A1B0GUL6 1792 aa17.45■□□□□ 0.38
APOBEC3B-202ENST00000335760 FER1L6Q2WGJ9 1857 aa17.45■□□□□ 0.38
APOBEC3B-202ENST00000335760 NFKBIEO00221 500 aa17.44■□□□□ 0.38
APOBEC3B-202ENST00000335760 FKBP4Q02790 459 aaKnown RBP eCLIP17.44■□□□□ 0.38
APOBEC3B-202ENST00000335760 GGA1Q9UJY5 639 aa17.44■□□□□ 0.38
APOBEC3B-202ENST00000335760 LTBP1Q14766 1721 aa17.44■□□□□ 0.38
APOBEC3B-202ENST00000335760 C6orf229H3BNL8 230 aa17.43■□□□□ 0.38
APOBEC3B-202ENST00000335760 UFL1O94874 794 aa17.43■□□□□ 0.38
APOBEC3B-202ENST00000335760 ATP2B4P23634 1241 aa17.43■□□□□ 0.38
APOBEC3B-202ENST00000335760 RASSF7Q02833 373 aa17.43■□□□□ 0.38
APOBEC3B-202ENST00000335760 HDAC1Q13547 482 aaPredicted RBP17.43■□□□□ 0.38
APOBEC3B-202ENST00000335760 HSP90AB4PQ58FF6 505 aa17.43■□□□□ 0.38
APOBEC3B-202ENST00000335760 TBC1D16Q8TBP0 767 aa17.43■□□□□ 0.38
APOBEC3B-202ENST00000335760 TAOK3Q9H2K8 898 aa17.43■□□□□ 0.38
APOBEC3B-202ENST00000335760 CEP126Q9P2H0 1117 aa17.43■□□□□ 0.38
APOBEC3B-202ENST00000335760 POLLQ9UGP5 575 aa17.43■□□□□ 0.38
APOBEC3B-202ENST00000335760 WTIPA6NIX2 430 aaPredicted RBP17.42■□□□□ 0.38
APOBEC3B-202ENST00000335760 PDE8BO95263 885 aa17.42■□□□□ 0.38
APOBEC3B-202ENST00000335760 KCNJ4P48050 445 aa17.42■□□□□ 0.38
APOBEC3B-202ENST00000335760 TFCP2Q12800 502 aa17.42■□□□□ 0.38
APOBEC3B-202ENST00000335760 VGLL2Q8N8G2 317 aa17.42■□□□□ 0.38
APOBEC3B-202ENST00000335760 SUPT20HQ8NEM7 779 aa17.42■□□□□ 0.38
APOBEC3B-202ENST00000335760 PSMD1Q99460 953 aa17.42■□□□□ 0.38
APOBEC3B-202ENST00000335760 RTFDC1Q9BY42 306 aaPredicted RBP17.42■□□□□ 0.38
APOBEC3B-202ENST00000335760 RWDD1Q9H446 243 aaPredicted RBP17.42■□□□□ 0.38
APOBEC3B-202ENST00000335760 LEMD3Q9Y2U8 911 aa17.42■□□□□ 0.38
APOBEC3B-202ENST00000335760 DUOX1Q9NRD9 1551 aa17.42■□□□□ 0.38
APOBEC3B-202ENST00000335760 ZNF804BA4D1E1 1349 aa17.42■□□□□ 0.38
APOBEC3B-202ENST00000335760 SNAP23O00161 211 aa17.41■□□□□ 0.38
APOBEC3B-202ENST00000335760 APBB1O00213 710 aa17.41■□□□□ 0.38
APOBEC3B-202ENST00000335760 SASH1O94885 1247 aa17.41■□□□□ 0.38
APOBEC3B-202ENST00000335760 ERC1Q8IUD2 1116 aa17.41■□□□□ 0.38
APOBEC3B-202ENST00000335760 GPR101Q96P66 508 aaPredicted RBP17.41■□□□□ 0.38
APOBEC3B-202ENST00000335760 DCTPP1Q9H773 170 aa17.41■□□□□ 0.38
APOBEC3B-202ENST00000335760 ZNF277Q9NRM2 450 aaPredicted RBP17.41■□□□□ 0.38
APOBEC3B-202ENST00000335760 LTBP3Q9NS15 1303 aa17.41■□□□□ 0.38
APOBEC3B-202ENST00000335760 RAB11FIP3O75154 756 aa17.4■□□□□ 0.38
APOBEC3B-202ENST00000335760 EYA3Q99504 573 aa17.4■□□□□ 0.38
APOBEC3B-202ENST00000335760 RIMBP2O15034 1052 aa17.4■□□□□ 0.38
APOBEC3B-202ENST00000335760 IGHDP01880 384 aa17.4■□□□□ 0.38
APOBEC3B-202ENST00000335760 UBE4AQ14139 1066 aa17.4■□□□□ 0.38
APOBEC3B-202ENST00000335760 PUM3Q15397 648 aaKnown RBP17.4■□□□□ 0.38
APOBEC3B-202ENST00000335760 WASHC4Q2M389 1173 aa17.4■□□□□ 0.38
APOBEC3B-202ENST00000335760 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.4■□□□□ 0.38
APOBEC3B-202ENST00000335760 FGFR2P21802 821 aa17.39■□□□□ 0.37
APOBEC3B-202ENST00000335760 AOC3Q16853 763 aa17.39■□□□□ 0.37
APOBEC3B-202ENST00000335760 RHPN1Q8TCX5 695 aa17.39■□□□□ 0.37
APOBEC3B-202ENST00000335760 PPIP5K2O43314 1243 aa17.38■□□□□ 0.37
APOBEC3B-202ENST00000335760 KLRK1P26718 216 aa17.38■□□□□ 0.37
APOBEC3B-202ENST00000335760 IARSP41252 1262 aaKnown RBP17.38■□□□□ 0.37
APOBEC3B-202ENST00000335760 PRELPP51888 382 aa17.38■□□□□ 0.37
APOBEC3B-202ENST00000335760 ATP2B3Q16720 1220 aa17.38■□□□□ 0.37
APOBEC3B-202ENST00000335760 LPIN2Q92539 896 aa17.38■□□□□ 0.37
APOBEC3B-202ENST00000335760 GCC1Q96CN9 775 aa17.38■□□□□ 0.37
APOBEC3B-202ENST00000335760 KIF1BPQ96EK5 621 aa17.38■□□□□ 0.37
APOBEC3B-202ENST00000335760 ZC3H12CQ9C0D7 883 aaKnown RBP17.38■□□□□ 0.37
APOBEC3B-202ENST00000335760 AKAP2Q9Y2D5 859 aa17.38■□□□□ 0.37
APOBEC3B-202ENST00000335760 CCDC88AQ3V6T2 1871 aa17.37■□□□□ 0.37
APOBEC3B-202ENST00000335760 MED23Q9ULK4 1368 aa17.37■□□□□ 0.37
APOBEC3B-202ENST00000335760 IFIT1P09914 478 aaKnown RBP17.37■□□□□ 0.37
APOBEC3B-202ENST00000335760 SLC5A1P13866 664 aa17.37■□□□□ 0.37
APOBEC3B-202ENST00000335760 LMNB1P20700 586 aa17.37■□□□□ 0.37
APOBEC3B-202ENST00000335760 KIAA2012Q0VF49 1180 aa17.37■□□□□ 0.37
APOBEC3B-202ENST00000335760 ERICH6BQ5W0A0 696 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms