RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 XAGE2Q96GT9 111 aa11.15□□□□□ -0.62
SS18L1-201ENST00000331758 CCDC87Q9NVE4 849 aa11.15□□□□□ -0.62
SS18L1-201ENST00000331758 SNX14Q9Y5W7 946 aa11.15□□□□□ -0.62
SS18L1-201ENST00000331758 GOLGA8AA7E2F4 631 aa11.15□□□□□ -0.62
SS18L1-201ENST00000331758 KLHL40Q2TBA0 621 aa11.15□□□□□ -0.62
SS18L1-201ENST00000331758 TPTE2Q6XPS3 522 aa11.15□□□□□ -0.62
SS18L1-201ENST00000331758 ZNF592Q92610 1267 aa11.15□□□□□ -0.62
SS18L1-201ENST00000331758 IQCA1Q86XH1 822 aa11.15□□□□□ -0.63
SS18L1-201ENST00000331758 TECPR2O15040 1411 aa11.15□□□□□ -0.63
SS18L1-201ENST00000331758 RAD50Q92878 1312 aa11.14□□□□□ -0.63
SS18L1-201ENST00000331758 PDE8AO60658 829 aa11.14□□□□□ -0.63
SS18L1-201ENST00000331758 MFSD6Q6ZSS7 791 aa11.14□□□□□ -0.63
SS18L1-201ENST00000331758 RNF41Q9H4P4 317 aaPredicted RBP11.14□□□□□ -0.63
SS18L1-201ENST00000331758 PALD1Q9ULE6 856 aa11.14□□□□□ -0.63
SS18L1-201ENST00000331758 TAF5LO75529 589 aa11.14□□□□□ -0.63
SS18L1-201ENST00000331758 TPM2P07951 284 aa11.14□□□□□ -0.63
SS18L1-201ENST00000331758 OLFM4Q6UX06 510 aa11.14□□□□□ -0.63
SS18L1-201ENST00000331758 MIGA1Q8NAN2 632 aa11.14□□□□□ -0.63
SS18L1-201ENST00000331758 RBM10P98175 930 aaKnown RBP11.14□□□□□ -0.63
SS18L1-201ENST00000331758 MAP3K11Q16584 847 aa11.14□□□□□ -0.63
SS18L1-201ENST00000331758 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.14□□□□□ -0.63
SS18L1-201ENST00000331758 RUFY3Q7L099 469 aa11.14□□□□□ -0.63
SS18L1-201ENST00000331758 PANK2Q9BZ23 570 aa11.14□□□□□ -0.63
SS18L1-201ENST00000331758 JAG2Q9Y219 1238 aa11.14□□□□□ -0.63
SS18L1-201ENST00000331758 CNPY2Q9Y2B0 182 aa11.14□□□□□ -0.63
SS18L1-201ENST00000331758 LRRC24Q50LG9 513 aa11.13□□□□□ -0.63
SS18L1-201ENST00000331758 CKAP2LQ8IYA6 745 aa11.13□□□□□ -0.63
SS18L1-201ENST00000331758 KBTBD3Q8NAB2 608 aa11.13□□□□□ -0.63
SS18L1-201ENST00000331758 BCL11BQ9C0K0 894 aaPredicted RBP11.13□□□□□ -0.63
SS18L1-201ENST00000331758 CCDC39Q9UFE4 941 aa11.13□□□□□ -0.63
SS18L1-201ENST00000331758 CCNL1Q9UK58 526 aaPredicted RBP11.13□□□□□ -0.63
SS18L1-201ENST00000331758 ZBTB1Q9Y2K1 713 aa11.13□□□□□ -0.63
SS18L1-201ENST00000331758 SLC4A4Q9Y6R1 1079 aa11.13□□□□□ -0.63
SS18L1-201ENST00000331758 TPM3P06753 285 aa11.13□□□□□ -0.63
SS18L1-201ENST00000331758 NEURL4Q96JN8 1562 aa11.13□□□□□ -0.63
SS18L1-201ENST00000331758 APOBRQ0VD83 1088 aa11.13□□□□□ -0.63
SS18L1-201ENST00000331758 SLC27A2O14975 620 aa11.13□□□□□ -0.63
SS18L1-201ENST00000331758 IARSP41252 1262 aaKnown RBP11.13□□□□□ -0.63
SS18L1-201ENST00000331758 MAGEB6Q8N7X4 407 aa11.13□□□□□ -0.63
SS18L1-201ENST00000331758 CCDC47Q96A33 483 aaKnown RBP11.13□□□□□ -0.63
SS18L1-201ENST00000331758 TLR7Q9NYK1 1049 aaKnown RBP11.13□□□□□ -0.63
SS18L1-201ENST00000331758 CTDP1Q9Y5B0 961 aaPredicted RBP11.13□□□□□ -0.63
SS18L1-201ENST00000331758 ERBB4Q15303 1308 aa11.13□□□□□ -0.63
SS18L1-201ENST00000331758 C1orf167Q5SNV9 1468 aa11.12□□□□□ -0.63
SS18L1-201ENST00000331758 CCDC196A0A1B0GTZ2 297 aa11.12□□□□□ -0.63
SS18L1-201ENST00000331758 METAP2P50579 478 aaKnown RBP eCLIP11.12□□□□□ -0.63
SS18L1-201ENST00000331758 DNM1Q05193 864 aaKnown RBP11.12□□□□□ -0.63
SS18L1-201ENST00000331758 CCDC183Q5T5S1 534 aa11.12□□□□□ -0.63
SS18L1-201ENST00000331758 ATP5JP18859 108 aa11.12□□□□□ -0.63
SS18L1-201ENST00000331758 PARP10Q53GL7 1025 aa11.12□□□□□ -0.63
SS18L1-201ENST00000331758 WASF1Q92558 559 aa11.12□□□□□ -0.63
SS18L1-201ENST00000331758 MAP7D2Q96T17 732 aa11.12□□□□□ -0.63
SS18L1-201ENST00000331758 NSFL1CQ9UNZ2 370 aaKnown RBP11.12□□□□□ -0.63
SS18L1-201ENST00000331758 RICTORQ6R327 1708 aa11.12□□□□□ -0.63
SS18L1-201ENST00000331758 PRC1O43663 620 aa11.12□□□□□ -0.63
SS18L1-201ENST00000331758 SMC2O95347 1197 aa11.12□□□□□ -0.63
SS18L1-201ENST00000331758 HSPA4P34932 840 aa11.12□□□□□ -0.63
SS18L1-201ENST00000331758 CTCFLQ8NI51 663 aaPredicted RBP11.12□□□□□ -0.63
SS18L1-201ENST00000331758 INTS4Q96HW7 963 aaKnown RBP11.12□□□□□ -0.63
SS18L1-201ENST00000331758 OSBPL3Q9H4L5 887 aa11.12□□□□□ -0.63
SS18L1-201ENST00000331758 STAP2Q9UGK3 403 aa11.12□□□□□ -0.63
SS18L1-201ENST00000331758 USP21Q9UK80 565 aa11.12□□□□□ -0.63
SS18L1-201ENST00000331758 CD163L1Q9NR16 1453 aa11.12□□□□□ -0.63
SS18L1-201ENST00000331758 A0A0D9SFI3 127 aa11.11□□□□□ -0.63
SS18L1-201ENST00000331758 SYT1P21579 422 aa11.11□□□□□ -0.63
SS18L1-201ENST00000331758 PTH1RQ03431 593 aa11.11□□□□□ -0.63
SS18L1-201ENST00000331758 NAA16Q6N069 864 aaPredicted RBP11.11□□□□□ -0.63
SS18L1-201ENST00000331758 DHX32Q7L7V1 743 aaKnown RBP11.11□□□□□ -0.63
SS18L1-201ENST00000331758 USP48Q86UV5 1035 aa11.11□□□□□ -0.63
SS18L1-201ENST00000331758 PIGBQ92521 554 aa11.11□□□□□ -0.63
SS18L1-201ENST00000331758 SEC62Q99442 399 aaKnown RBP11.11□□□□□ -0.63
SS18L1-201ENST00000331758 PUS3Q9BZE2 481 aaKnown RBP11.11□□□□□ -0.63
SS18L1-201ENST00000331758 COPRSQ9NQ92 184 aa11.11□□□□□ -0.63
SS18L1-201ENST00000331758 ZAP70P43403 619 aa11.11□□□□□ -0.63
SS18L1-201ENST00000331758 KCNQ4P56696 695 aa11.11□□□□□ -0.63
SS18L1-201ENST00000331758 FAM182BQ5T319 152 aa11.11□□□□□ -0.63
SS18L1-201ENST00000331758 ZNF444Q8N0Y2 327 aaPredicted RBP11.11□□□□□ -0.63
SS18L1-201ENST00000331758 ANKRD20A12PQ8NF67 263 aa11.11□□□□□ -0.63
SS18L1-201ENST00000331758 TPM1P09493 284 aa11.11□□□□□ -0.63
SS18L1-201ENST00000331758 F13A1P00488 732 aa11.11□□□□□ -0.63
SS18L1-201ENST00000331758 IGKV5-2P06315 115 aa11.11□□□□□ -0.63
SS18L1-201ENST00000331758 PCMTD1Q96MG8 357 aaPredicted RBP11.11□□□□□ -0.63
SS18L1-201ENST00000331758 NYXQ9GZU5 481 aa11.11□□□□□ -0.63
SS18L1-201ENST00000331758 CRB1P82279 1406 aa11.1□□□□□ -0.63
SS18L1-201ENST00000331758 LOC102724428A0A0B4J2F2 783 aa11.1□□□□□ -0.63
SS18L1-201ENST00000331758 TSPY2A6NKD2 308 aa11.1□□□□□ -0.63
SS18L1-201ENST00000331758 CD2BP2O95400 341 aaKnown RBP11.1□□□□□ -0.63
SS18L1-201ENST00000331758 SIK1P57059 783 aa11.1□□□□□ -0.63
SS18L1-201ENST00000331758 TSR1Q2NL82 804 aaKnown RBP11.1□□□□□ -0.63
SS18L1-201ENST00000331758 ZNF622Q969S3 477 aaKnown RBP eCLIP11.1□□□□□ -0.637e-6■■□□□ 12.8
SS18L1-201ENST00000331758 SLC26A6Q9BXS9 759 aa11.1□□□□□ -0.63
SS18L1-201ENST00000331758 DBNLQ9UJU6 430 aaKnown RBP11.1□□□□□ -0.63
SS18L1-201ENST00000331758 HEG1Q9ULI3 1381 aa11.1□□□□□ -0.63
SS18L1-201ENST00000331758 DIP2AQ14689 1571 aa11.1□□□□□ -0.63
SS18L1-201ENST00000331758 UBE2HP62256 183 aa11.1□□□□□ -0.63
SS18L1-201ENST00000331758 SOGA3Q5TF21 947 aa11.1□□□□□ -0.63
SS18L1-201ENST00000331758 NOL7Q9UMY1 257 aaKnown RBP11.1□□□□□ -0.63
SS18L1-201ENST00000331758 R3HCC1Q9Y3T6 440 aaKnown RBP11.1□□□□□ -0.63
SS18L1-201ENST00000331758 IQSEC2Q5JU85 1478 aa11.1□□□□□ -0.63
SS18L1-201ENST00000331758 ZBTB43O43298 467 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms