RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 OVOS2A0A0J9YW53 1432 aa28.36■■■□□ 2.13
SOX1-201ENST00000330949 OVOS2Q6IE36 1432 aa28.36■■■□□ 2.13
SOX1-201ENST00000330949 SRLQ86TD4 932 aa28.35■■■□□ 2.13
SOX1-201ENST00000330949 EXOC4Q96A65 974 aa28.35■■■□□ 2.13
SOX1-201ENST00000330949 RBM8AQ9Y5S9 174 aaKnown RBP28.35■■■□□ 2.13
SOX1-201ENST00000330949 TRIM66O15016 1216 aa28.35■■■□□ 2.13
SOX1-201ENST00000330949 SEC31AO94979 1220 aaKnown RBP28.35■■■□□ 2.13
SOX1-201ENST00000330949 TBC1D8O95759 1140 aa28.35■■■□□ 2.13
SOX1-201ENST00000330949 TEX2Q8IWB9 1127 aa28.35■■■□□ 2.13
SOX1-201ENST00000330949 RBM33Q96EV2 1170 aaKnown RBP28.35■■■□□ 2.13
SOX1-201ENST00000330949 ALDH8A1Q9H2A2 487 aaPredicted RBP28.35■■■□□ 2.13
SOX1-201ENST00000330949 DNAI1Q9UI46 699 aa28.35■■■□□ 2.13
SOX1-201ENST00000330949 CACNA1FO60840 1977 aa28.34■■■□□ 2.13
SOX1-201ENST00000330949 RESTQ13127 1097 aa28.34■■■□□ 2.13
SOX1-201ENST00000330949 BLOC1S2Q6QNY1 142 aa28.34■■■□□ 2.13
SOX1-201ENST00000330949 KINO60870 393 aaKnown RBP28.34■■■□□ 2.13
SOX1-201ENST00000330949 CCDC73Q6ZRK6 1079 aa28.34■■■□□ 2.13
SOX1-201ENST00000330949 SYTL4Q96C24 671 aaPredicted RBP28.34■■■□□ 2.13
SOX1-201ENST00000330949 LRRFIP1Q32MZ4 808 aaKnown RBP28.33■■■□□ 2.13
SOX1-201ENST00000330949 HSP90AB4PQ58FF6 505 aa28.33■■■□□ 2.13
SOX1-201ENST00000330949 ZCCHC17Q9NP64 241 aaKnown RBP28.33■■■□□ 2.13
SOX1-201ENST00000330949 ARMCX5Q6P1M9 558 aa28.33■■■□□ 2.13
SOX1-201ENST00000330949 CCAR1Q8IX12 1150 aaKnown RBP28.33■■■□□ 2.13
SOX1-201ENST00000330949 ATG3Q9NT62 314 aa28.33■■■□□ 2.13
SOX1-201ENST00000330949 LCMT1Q9UIC8 334 aa28.33■■■□□ 2.13
SOX1-201ENST00000330949 GTF2A1P52655 376 aaPredicted RBP28.33■■■□□ 2.12
SOX1-201ENST00000330949 CC2D1AQ6P1N0 951 aaPredicted RBP28.33■■■□□ 2.12
SOX1-201ENST00000330949 SASH3O75995 380 aa28.32■■■□□ 2.12
SOX1-201ENST00000330949 ICE2Q659A1 982 aa28.32■■■□□ 2.12
SOX1-201ENST00000330949 IQUBQ8NA54 791 aa28.32■■■□□ 2.12
SOX1-201ENST00000330949 RRP15Q9Y3B9 282 aaKnown RBP28.32■■■□□ 2.12
SOX1-201ENST00000330949 NOM1Q5C9Z4 860 aaKnown RBP28.31■■■□□ 2.12
SOX1-201ENST00000330949 TMC6Q7Z403 805 aa28.31■■■□□ 2.12
SOX1-201ENST00000330949 FAM208AQ9UK61 1670 aaKnown RBP28.31■■■□□ 2.12
SOX1-201ENST00000330949 MAP4K1Q92918 833 aa28.31■■■□□ 2.12
SOX1-201ENST00000330949 H3BQV1 296 aa28.3■■■□□ 2.12
SOX1-201ENST00000330949 SRGAP3O43295 1099 aa28.3■■■□□ 2.12
SOX1-201ENST00000330949 IFFO2Q5TF58 517 aa28.3■■■□□ 2.12
SOX1-201ENST00000330949 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.3■■■□□ 2.12
SOX1-201ENST00000330949 REXO1L1PQ8IX06 675 aa28.3■■■□□ 2.12
SOX1-201ENST00000330949 GPR161Q8N6U8 529 aaKnown RBP28.3■■■□□ 2.12
SOX1-201ENST00000330949 ZFP91Q96JP5 570 aaPredicted RBP28.3■■■□□ 2.12
SOX1-201ENST00000330949 ARFGAP3Q9NP61 516 aa28.3■■■□□ 2.12
SOX1-201ENST00000330949 URI1O94763 535 aaPredicted RBP28.29■■■□□ 2.12
SOX1-201ENST00000330949 RPS6KB1P23443 525 aa28.29■■■□□ 2.12
SOX1-201ENST00000330949 EVCP57679 992 aa28.29■■■□□ 2.12
SOX1-201ENST00000330949 SLC27A2O14975 620 aa28.29■■■□□ 2.12
SOX1-201ENST00000330949 EIF2S2P20042 333 aaKnown RBP28.29■■■□□ 2.12
SOX1-201ENST00000330949 CARD6Q9BX69 1037 aa28.29■■■□□ 2.12
SOX1-201ENST00000330949 UBR1Q8IWV7 1749 aa28.29■■■□□ 2.12
SOX1-201ENST00000330949 SMC2O95347 1197 aa28.28■■■□□ 2.12
SOX1-201ENST00000330949 FAM160A1Q05DH4 1040 aa28.28■■■□□ 2.12
SOX1-201ENST00000330949 BRF1Q92994 677 aa28.28■■■□□ 2.12
SOX1-201ENST00000330949 XPO4Q9C0E2 1151 aaKnown RBP28.28■■■□□ 2.12
SOX1-201ENST00000330949 ADAM21Q9UKJ8 722 aa28.28■■■□□ 2.12
SOX1-201ENST00000330949 ACTN2P35609 894 aa28.28■■■□□ 2.12
SOX1-201ENST00000330949 BRMS1Q9HCU9 246 aa28.28■■■□□ 2.12
SOX1-201ENST00000330949 LMAN1P49257 510 aa28.27■■■□□ 2.12
SOX1-201ENST00000330949 TOB2Q14106 344 aaPredicted RBP28.27■■■□□ 2.12
SOX1-201ENST00000330949 CCDC34Q96HJ3 373 aa28.27■■■□□ 2.12
SOX1-201ENST00000330949 RCOR1Q9UKL0 485 aa28.27■■■□□ 2.12
SOX1-201ENST00000330949 IVLP07476 585 aa28.27■■■□□ 2.12
SOX1-201ENST00000330949 CHRM1P11229 460 aaPredicted RBP28.27■■■□□ 2.12
SOX1-201ENST00000330949 EVI5LQ96CN4 794 aa28.27■■■□□ 2.12
SOX1-201ENST00000330949 GPATCH3Q96I76 525 aa28.27■■■□□ 2.12
SOX1-201ENST00000330949 HIP1O00291 1037 aa28.26■■■□□ 2.11
SOX1-201ENST00000330949 STK3Q13188 491 aa28.26■■■□□ 2.11
SOX1-201ENST00000330949 TRIM65Q6PJ69 517 aa28.26■■■□□ 2.11
SOX1-201ENST00000330949 GOLPH3LQ9H4A5 285 aa28.26■■■□□ 2.11
SOX1-201ENST00000330949 PHAXQ9H814 394 aaKnown RBP28.26■■■□□ 2.11
SOX1-201ENST00000330949 IFNKQ9P0W0 207 aa28.26■■■□□ 2.11
SOX1-201ENST00000330949 ECHDC1Q9NTX5 307 aa28.25■■■□□ 2.11
SOX1-201ENST00000330949 LEKR1Q6ZMV7 388 aa28.25■■■□□ 2.11
SOX1-201ENST00000330949 TCEANC2Q96MN5 208 aa28.25■■■□□ 2.11
SOX1-201ENST00000330949 PARP3Q9Y6F1 533 aa28.25■■■□□ 2.11
SOX1-201ENST00000330949 PLEKHG2Q9H7P9 1386 aa28.24■■■□□ 2.11
SOX1-201ENST00000330949 A0A1B0GUL7 405 aa28.24■■■□□ 2.11
SOX1-201ENST00000330949 CEBPZQ03701 1054 aaKnown RBP28.24■■■□□ 2.11
SOX1-201ENST00000330949 PSME1Q06323 249 aa28.24■■■□□ 2.11
SOX1-201ENST00000330949 ENGASEQ8NFI3 743 aa28.24■■■□□ 2.11
SOX1-201ENST00000330949 ZBTB9Q96C00 473 aa28.24■■■□□ 2.11
SOX1-201ENST00000330949 BPIFA3Q9BQP9 254 aa28.24■■■□□ 2.11
SOX1-201ENST00000330949 TMX1Q9H3N1 280 aa28.24■■■□□ 2.11
SOX1-201ENST00000330949 EID1Q9Y6B2 187 aa28.24■■■□□ 2.11
SOX1-201ENST00000330949 USP31Q70CQ4 1352 aa28.24■■■□□ 2.11
SOX1-201ENST00000330949 CLASRPQ8N2M8 674 aaKnown RBP28.24■■■□□ 2.11
SOX1-201ENST00000330949 A0A087WWV3 80 aa28.24■■■□□ 2.11
SOX1-201ENST00000330949 ZRSR1Q15695 479 aaKnown RBP28.24■■■□□ 2.11
SOX1-201ENST00000330949 ANXA1P04083 346 aa28.23■■■□□ 2.11
SOX1-201ENST00000330949 GYS2P54840 703 aa28.23■■■□□ 2.11
SOX1-201ENST00000330949 PLEKHG1Q9ULL1 1385 aa28.23■■■□□ 2.11
SOX1-201ENST00000330949 FUT8Q9BYC5 575 aa28.23■■■□□ 2.11
SOX1-201ENST00000330949 CEP170BQ9Y4F5 1589 aaPredicted RBP28.22■■■□□ 2.11
SOX1-201ENST00000330949 GNAT3A8MTJ3 354 aa28.22■■■□□ 2.11
SOX1-201ENST00000330949 JAK2O60674 1132 aa28.22■■■□□ 2.11
SOX1-201ENST00000330949 OS9Q13438 667 aaPredicted RBP28.22■■■□□ 2.11
SOX1-201ENST00000330949 ABTB2Q8N961 1025 aa28.22■■■□□ 2.11
SOX1-201ENST00000330949 IL17REQ8NFR9 667 aa28.22■■■□□ 2.11
SOX1-201ENST00000330949 DDX11Q96FC9 970 aa28.22■■■□□ 2.11
SOX1-201ENST00000330949 FLT4P35916 1363 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms