RNA–Protein interactions for RNA: ENST00000326654.6

ERGIC1-201, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best) BASIC

Gene ERGIC1, Length 3,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-201ENST00000326654 RNF20Q5VTR2 975 aa9.81□□□□□ -0.84
ERGIC1-201ENST00000326654 EVI5LQ96CN4 794 aa9.81□□□□□ -0.84
ERGIC1-201ENST00000326654 SNRKQ9NRH2 765 aa9.81□□□□□ -0.84
ERGIC1-201ENST00000326654 CAVIN4Q5BKX8 364 aa9.81□□□□□ -0.84
ERGIC1-201ENST00000326654 SMIM5Q71RC9 77 aa9.81□□□□□ -0.84
ERGIC1-201ENST00000326654 ISCA1Q9BUE6 129 aa9.81□□□□□ -0.84
ERGIC1-201ENST00000326654 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.81□□□□□ -0.84
ERGIC1-201ENST00000326654 SLIT2O94813 1529 aa9.81□□□□□ -0.84
ERGIC1-201ENST00000326654 ATP10DQ9P241 1426 aa9.81□□□□□ -0.84
ERGIC1-201ENST00000326654 TTC41PQ6P2S7 1318 aa9.81□□□□□ -0.84
ERGIC1-201ENST00000326654 SYCE3A1L190 88 aa9.81□□□□□ -0.84
ERGIC1-201ENST00000326654 IDH1O75874 414 aaKnown RBP9.81□□□□□ -0.84
ERGIC1-201ENST00000326654 LINC00116Q8NCU8 138 aa9.81□□□□□ -0.84
ERGIC1-201ENST00000326654 RBSNQ9H1K0 784 aa9.81□□□□□ -0.84
ERGIC1-201ENST00000326654 COPRSQ9NQ92 184 aa9.81□□□□□ -0.84
ERGIC1-201ENST00000326654 GOLIM4O00461 696 aa9.8□□□□□ -0.84
ERGIC1-201ENST00000326654 TNNI3KQ59H18 835 aa9.8□□□□□ -0.84
ERGIC1-201ENST00000326654 SUSD4Q5VX71 490 aa9.8□□□□□ -0.84
ERGIC1-201ENST00000326654 CLEC4GQ6UXB4 293 aa9.8□□□□□ -0.84
ERGIC1-201ENST00000326654 CCDC94Q9BW85 323 aaPredicted RBP9.8□□□□□ -0.84
ERGIC1-201ENST00000326654 FPGT-TNNI3KV9GXZ4 949 aa9.8□□□□□ -0.84
ERGIC1-201ENST00000326654 POLA2Q14181 598 aa9.8□□□□□ -0.84
ERGIC1-201ENST00000326654 TXNRD1Q16881 649 aa9.8□□□□□ -0.84
ERGIC1-201ENST00000326654 GREM2Q9H772 168 aa9.8□□□□□ -0.84
ERGIC1-201ENST00000326654 TOMM22Q9NS69 142 aa9.8□□□□□ -0.84
ERGIC1-201ENST00000326654 FAM208AQ9UK61 1670 aaKnown RBP9.8□□□□□ -0.84
ERGIC1-201ENST00000326654 A0A1B0GUL7 405 aa9.8□□□□□ -0.84
ERGIC1-201ENST00000326654 TRIM28Q13263 835 aaKnown RBP9.8□□□□□ -0.84
ERGIC1-201ENST00000326654 SYNE4Q8N205 404 aa9.8□□□□□ -0.84
ERGIC1-201ENST00000326654 SLC4A9Q96Q91 983 aa9.8□□□□□ -0.84
ERGIC1-201ENST00000326654 DBNDD2Q9BQY9 259 aa9.8□□□□□ -0.84
ERGIC1-201ENST00000326654 CCDC39Q9UFE4 941 aa9.8□□□□□ -0.84
ERGIC1-201ENST00000326654 ABCF2Q9UG63 623 aa9.8□□□□□ -0.84
ERGIC1-201ENST00000326654 PARP3Q9Y6F1 533 aa9.8□□□□□ -0.84
ERGIC1-201ENST00000326654 PXDNLA1KZ92 1463 aa9.79□□□□□ -0.84
ERGIC1-201ENST00000326654 BAG4O95429 457 aaKnown RBP9.79□□□□□ -0.84
ERGIC1-201ENST00000326654 PDIA4P13667 645 aaKnown RBP9.79□□□□□ -0.84
ERGIC1-201ENST00000326654 MTX1Q13505 466 aa9.79□□□□□ -0.84
ERGIC1-201ENST00000326654 SLC27A3Q5K4L6 730 aa9.79□□□□□ -0.84
ERGIC1-201ENST00000326654 FBXO41Q8TF61 875 aa9.79□□□□□ -0.84
ERGIC1-201ENST00000326654 NARFQ9UHQ1 456 aa9.79□□□□□ -0.84
ERGIC1-201ENST00000326654 ZKSCAN5Q9Y2L8 839 aa9.79□□□□□ -0.84
ERGIC1-201ENST00000326654 USP54Q70EL1 1684 aa9.79□□□□□ -0.84
ERGIC1-201ENST00000326654 INTS5Q6P9B9 1019 aaKnown RBP9.79□□□□□ -0.84
ERGIC1-201ENST00000326654 ARHGEF1Q92888 912 aaKnown RBP9.79□□□□□ -0.84
ERGIC1-201ENST00000326654 BCL9LQ86UU0 1499 aa9.79□□□□□ -0.84
ERGIC1-201ENST00000326654 K7ELQ4 463 aaPredicted RBP9.79□□□□□ -0.84
ERGIC1-201ENST00000326654 LRRC24Q50LG9 513 aa9.79□□□□□ -0.84
ERGIC1-201ENST00000326654 EAF2Q96CJ1 260 aaPredicted RBP9.79□□□□□ -0.84
ERGIC1-201ENST00000326654 NOL10Q9BSC4 688 aaKnown RBP9.79□□□□□ -0.84
ERGIC1-201ENST00000326654 LRP2BPQ9P2M1 347 aa9.79□□□□□ -0.84
ERGIC1-201ENST00000326654 RGS12O14924 1447 aa9.78□□□□□ -0.84
ERGIC1-201ENST00000326654 PTPN12Q05209 780 aaKnown RBP9.78□□□□□ -0.84
ERGIC1-201ENST00000326654 ZSCAN23Q3MJ62 389 aa9.78□□□□□ -0.84
ERGIC1-201ENST00000326654 ZSCAN25Q6NSZ9 544 aa9.78□□□□□ -0.84
ERGIC1-201ENST00000326654 C17orf53Q8N3J3 647 aaPredicted RBP9.78□□□□□ -0.84
ERGIC1-201ENST00000326654 FLAD1Q8NFF5 587 aa9.78□□□□□ -0.84
ERGIC1-201ENST00000326654 PPP1R9BQ96SB3 815 aa9.78□□□□□ -0.84
ERGIC1-201ENST00000326654 PARP4Q9UKK3 1724 aaKnown RBP9.78□□□□□ -0.84
ERGIC1-201ENST00000326654 CHAF1AQ13111 956 aaPredicted RBP9.78□□□□□ -0.84
ERGIC1-201ENST00000326654 RAB3GAP1Q15042 981 aa9.78□□□□□ -0.84
ERGIC1-201ENST00000326654 RC3H1Q5TC82 1133 aaKnown RBP9.78□□□□□ -0.84
ERGIC1-201ENST00000326654 PTF1AQ7RTS3 328 aa9.78□□□□□ -0.84
ERGIC1-201ENST00000326654 ZNF622Q969S3 477 aaKnown RBP eCLIP9.78□□□□□ -0.84
ERGIC1-201ENST00000326654 NOL7Q9UMY1 257 aaKnown RBP9.78□□□□□ -0.84
ERGIC1-201ENST00000326654 CHAMP1Q96JM3 812 aa9.78□□□□□ -0.84
ERGIC1-201ENST00000326654 PUS3Q9BZE2 481 aaKnown RBP9.78□□□□□ -0.84
ERGIC1-201ENST00000326654 CIZ1Q9ULV3 898 aaPredicted RBP9.78□□□□□ -0.84
ERGIC1-201ENST00000326654 DISP2A7MBM2 1401 aa9.77□□□□□ -0.84
ERGIC1-201ENST00000326654 HOXD11P31277 338 aaPredicted RBP9.77□□□□□ -0.84
ERGIC1-201ENST00000326654 DMTNQ08495 405 aa9.77□□□□□ -0.84
ERGIC1-201ENST00000326654 KLHL40Q2TBA0 621 aa9.77□□□□□ -0.84
ERGIC1-201ENST00000326654 RAI14Q9P0K7 980 aa9.77□□□□□ -0.84
ERGIC1-201ENST00000326654 COL16A1Q07092 1604 aaPredicted RBP9.77□□□□□ -0.85
ERGIC1-201ENST00000326654 C6orf229H3BNL8 230 aa9.77□□□□□ -0.85
ERGIC1-201ENST00000326654 ERFEQ4G0M1 354 aa9.77□□□□□ -0.85
ERGIC1-201ENST00000326654 TTLL11Q8NHH1 800 aa9.77□□□□□ -0.85
ERGIC1-201ENST00000326654 TRERF1Q96PN7 1200 aa9.77□□□□□ -0.85
ERGIC1-201ENST00000326654 ZNF219Q9P2Y4 722 aaPredicted RBP9.77□□□□□ -0.85
ERGIC1-201ENST00000326654 TAF5LO75529 589 aa9.77□□□□□ -0.85
ERGIC1-201ENST00000326654 CAMTA2O94983 1202 aa9.77□□□□□ -0.85
ERGIC1-201ENST00000326654 UQCRFS1P1P0C7P4 283 aa9.77□□□□□ -0.85
ERGIC1-201ENST00000326654 NEK4P51957 841 aa9.77□□□□□ -0.85
ERGIC1-201ENST00000326654 MSL1Q68DK7 614 aa9.77□□□□□ -0.85
ERGIC1-201ENST00000326654 IQSEC3Q9UPP2 1182 aaPredicted RBP9.77□□□□□ -0.85
ERGIC1-201ENST00000326654 GSPT1P15170 499 aaKnown RBP9.76□□□□□ -0.85
ERGIC1-201ENST00000326654 TBC1D9BQ66K14 1250 aa9.76□□□□□ -0.85
ERGIC1-201ENST00000326654 NLGN1Q8N2Q7 840 aa9.76□□□□□ -0.85
ERGIC1-201ENST00000326654 CNTNAP4Q9C0A0 1308 aa9.76□□□□□ -0.85
ERGIC1-201ENST00000326654 SASH1O94885 1247 aa9.76□□□□□ -0.85
ERGIC1-201ENST00000326654 PDCL2Q8N4E4 241 aa9.76□□□□□ -0.85
ERGIC1-201ENST00000326654 NSFL1CQ9UNZ2 370 aaKnown RBP9.76□□□□□ -0.85
ERGIC1-201ENST00000326654 RABEP1Q15276 862 aa9.76□□□□□ -0.85
ERGIC1-201ENST00000326654 PUM3Q15397 648 aaKnown RBP9.76□□□□□ -0.85
ERGIC1-201ENST00000326654 XAGE2Q96GT9 111 aa9.76□□□□□ -0.85
ERGIC1-201ENST00000326654 FBXO3Q9UK99 471 aa9.76□□□□□ -0.85
ERGIC1-201ENST00000326654 AOX1Q06278 1338 aa9.76□□□□□ -0.85
ERGIC1-201ENST00000326654 MARF1Q9Y4F3 1742 aaKnown RBP9.76□□□□□ -0.85
ERGIC1-201ENST00000326654 CD2BP2O95400 341 aaKnown RBP9.75□□□□□ -0.85
ERGIC1-201ENST00000326654 RPS8P62241 208 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms