RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 TRIM27P14373 513 aa19.07■□□□□ 0.64
UBXN1-202ENST00000301935 KIAA2012Q0VF49 1180 aa19.07■□□□□ 0.64
UBXN1-202ENST00000301935 TCIRG1Q13488 830 aa19.07■□□□□ 0.64
UBXN1-202ENST00000301935 ERICH6BQ5W0A0 696 aa19.07■□□□□ 0.64
UBXN1-202ENST00000301935 CYP4F22Q6NT55 531 aa19.07■□□□□ 0.64
UBXN1-202ENST00000301935 G2E3Q7L622 706 aa19.07■□□□□ 0.64
UBXN1-202ENST00000301935 MPNDQ8N594 471 aa19.07■□□□□ 0.64
UBXN1-202ENST00000301935 CHMP4BQ9H444 224 aaKnown RBP19.07■□□□□ 0.64
UBXN1-202ENST00000301935 PHAXQ9H814 394 aaKnown RBP19.07■□□□□ 0.64
UBXN1-202ENST00000301935 GMPSP49915 693 aaPredicted RBP19.06■□□□□ 0.64
UBXN1-202ENST00000301935 GRAPQ13588 217 aa19.06■□□□□ 0.64
UBXN1-202ENST00000301935 CIAPIN1Q6FI81 312 aa19.06■□□□□ 0.64
UBXN1-202ENST00000301935 KSR2Q6VAB6 950 aa19.06■□□□□ 0.64
UBXN1-202ENST00000301935 DDX46Q7L014 1031 aaKnown RBP19.06■□□□□ 0.64
UBXN1-202ENST00000301935 GRAPLQ8TC17 118 aaPredicted RBP19.06■□□□□ 0.64
UBXN1-202ENST00000301935 TRMT112Q9UI30 125 aaKnown RBP19.06■□□□□ 0.64
UBXN1-202ENST00000301935 GRM1Q13255 1194 aa19.05■□□□□ 0.64
UBXN1-202ENST00000301935 AAMPQ13685 434 aa19.05■□□□□ 0.64
UBXN1-202ENST00000301935 ANKRD13DQ6ZTN6 518 aa19.05■□□□□ 0.64
UBXN1-202ENST00000301935 CCT4P50991 539 aaKnown RBP19.04■□□□□ 0.64
UBXN1-202ENST00000301935 PLBD2Q8NHP8 589 aa19.04■□□□□ 0.64
UBXN1-202ENST00000301935 GPR101Q96P66 508 aaPredicted RBP19.04■□□□□ 0.64
UBXN1-202ENST00000301935 RAD17O75943 681 aa19.03■□□□□ 0.64
UBXN1-202ENST00000301935 TMC4Q7Z404 712 aa19.03■□□□□ 0.64
UBXN1-202ENST00000301935 RIC3Q7Z5B4 369 aa19.03■□□□□ 0.64
UBXN1-202ENST00000301935 DNAAF4Q8WXU2 420 aa19.03■□□□□ 0.64
UBXN1-202ENST00000301935 BEGAINQ9BUH8 593 aa19.03■□□□□ 0.64
UBXN1-202ENST00000301935 GLIS2Q9BZE0 524 aaPredicted RBP19.03■□□□□ 0.64
UBXN1-202ENST00000301935 PGAP2Q9UHJ9 254 aa19.03■□□□□ 0.64
UBXN1-202ENST00000301935 COL4A1P02462 1669 aa19.02■□□□□ 0.64
UBXN1-202ENST00000301935 PI4KAP2A4QPH2 592 aa19.02■□□□□ 0.64
UBXN1-202ENST00000301935 CELF2O95319 508 aaKnown RBP19.02■□□□□ 0.64
UBXN1-202ENST00000301935 TNIP1Q15025 636 aa19.02■□□□□ 0.64
UBXN1-202ENST00000301935 INTS3Q68E01 1043 aaKnown RBP19.02■□□□□ 0.64
UBXN1-202ENST00000301935 SAPCD2Q86UD0 394 aa19.02■□□□□ 0.64
UBXN1-202ENST00000301935 PI4KAP1Q8N8J0 262 aa19.02■□□□□ 0.64
UBXN1-202ENST00000301935 ABHD8Q96I13 439 aa19.02■□□□□ 0.64
UBXN1-202ENST00000301935 YDJCA8MPS7 323 aa19.01■□□□□ 0.63
UBXN1-202ENST00000301935 NEXNQ0ZGT2 675 aa19.01■□□□□ 0.63
UBXN1-202ENST00000301935 TRPM4Q8TD43 1214 aa19.01■□□□□ 0.63
UBXN1-202ENST00000301935 ZC3H15Q8WU90 426 aaKnown RBP19.01■□□□□ 0.63
UBXN1-202ENST00000301935 CLUAP1Q96AJ1 413 aa19.01■□□□□ 0.63
UBXN1-202ENST00000301935 AOC2O75106 756 aa19■□□□□ 0.63
UBXN1-202ENST00000301935 MAP2K2P36507 400 aa19■□□□□ 0.63
UBXN1-202ENST00000301935 HIRAP54198 1017 aaPredicted RBP19■□□□□ 0.63
UBXN1-202ENST00000301935 MVPQ14764 893 aaKnown RBP19■□□□□ 0.63
UBXN1-202ENST00000301935 HHIPL1Q96JK4 782 aa19■□□□□ 0.63
UBXN1-202ENST00000301935 DDX19BQ9UMR2 479 aa19■□□□□ 0.63
UBXN1-202ENST00000301935 MAP3K2Q9Y2U5 619 aa19■□□□□ 0.63
UBXN1-202ENST00000301935 PANK1Q8TE04 598 aa18.99■□□□□ 0.63
UBXN1-202ENST00000301935 ISCA1Q9BUE6 129 aa18.99■□□□□ 0.63
UBXN1-202ENST00000301935 METTL22Q9BUU2 404 aaPredicted RBP18.99■□□□□ 0.63
UBXN1-202ENST00000301935 SHTN1A0MZ66 631 aa18.98■□□□□ 0.63
UBXN1-202ENST00000301935 ALDH1L1O75891 902 aa18.98■□□□□ 0.63
UBXN1-202ENST00000301935 RLBP1P12271 317 aa18.98■□□□□ 0.63
UBXN1-202ENST00000301935 SF3B3Q15393 1217 aaKnown RBP18.98■□□□□ 0.63
UBXN1-202ENST00000301935 C20orf194Q5TEA3 1177 aa18.98■□□□□ 0.63
UBXN1-202ENST00000301935 SLC4A10Q6U841 1118 aa18.98■□□□□ 0.63
UBXN1-202ENST00000301935 CDC37L1Q7L3B6 337 aa18.98■□□□□ 0.63
UBXN1-202ENST00000301935 TMEM57Q8N5G2 664 aa18.98■□□□□ 0.63
UBXN1-202ENST00000301935 LINS1Q8NG48 757 aa18.98■□□□□ 0.63
UBXN1-202ENST00000301935 CELF1Q92879 486 aaKnown RBP18.98■□□□□ 0.63
UBXN1-202ENST00000301935 SRCIN1Q9C0H9 1055 aa18.98■□□□□ 0.63
UBXN1-202ENST00000301935 CNOT7Q9UIV1 285 aaKnown RBP18.98■□□□□ 0.63
UBXN1-202ENST00000301935 F6X3S4 739 aa18.97■□□□□ 0.63
UBXN1-202ENST00000301935 WASHC4Q2M389 1173 aa18.97■□□□□ 0.63
UBXN1-202ENST00000301935 ITPRIPQ8IWB1 547 aa18.97■□□□□ 0.63
UBXN1-202ENST00000301935 MICALL2Q8IY33 904 aa18.97■□□□□ 0.63
UBXN1-202ENST00000301935 FAM89AQ96GI7 184 aa18.97■□□□□ 0.63
UBXN1-202ENST00000301935 ZNF408Q9H9D4 720 aa18.97■□□□□ 0.63
UBXN1-202ENST00000301935 HDAC5Q9UQL6 1122 aa18.97■□□□□ 0.63
UBXN1-202ENST00000301935 ATP5J2-PTCD1G3V325 749 aa18.96■□□□□ 0.63
UBXN1-202ENST00000301935 H7C1D1 291 aa18.96■□□□□ 0.63
UBXN1-202ENST00000301935 BEND3Q5T5X7 828 aa18.96■□□□□ 0.63
UBXN1-202ENST00000301935 DPF2Q92785 391 aa18.96■□□□□ 0.63
UBXN1-202ENST00000301935 DBNDD1Q9H9R9 158 aa18.96■□□□□ 0.63
UBXN1-202ENST00000301935 TSKSQ9UJT2 592 aa18.96■□□□□ 0.63
UBXN1-202ENST00000301935 NSFL1CQ9UNZ2 370 aaKnown RBP18.96■□□□□ 0.63
UBXN1-202ENST00000301935 COG6Q9Y2V7 657 aa18.96■□□□□ 0.63
UBXN1-202ENST00000301935 ZBTB12Q9Y330 459 aaPredicted RBP18.96■□□□□ 0.63
UBXN1-202ENST00000301935 PSMD14O00487 310 aa18.95■□□□□ 0.62
UBXN1-202ENST00000301935 TRIM28Q13263 835 aaKnown RBP18.95■□□□□ 0.62
UBXN1-202ENST00000301935 CRBNQ96SW2 442 aa18.95■□□□□ 0.62
UBXN1-202ENST00000301935 TNNQ9UQP3 1299 aa18.95■□□□□ 0.62
UBXN1-202ENST00000301935 CA12O43570 354 aa18.94■□□□□ 0.62
UBXN1-202ENST00000301935 POLLQ9UGP5 575 aa18.94■□□□□ 0.62
UBXN1-202ENST00000301935 SCN9AQ15858 1988 aa18.93■□□□□ 0.62
UBXN1-202ENST00000301935 RIMBP2O15034 1052 aa18.93■□□□□ 0.62
UBXN1-202ENST00000301935 ECE2O60344 883 aa18.93■□□□□ 0.62
UBXN1-202ENST00000301935 GNAI3P08754 354 aa18.93■□□□□ 0.62
UBXN1-202ENST00000301935 GPSM2P81274 684 aa18.93■□□□□ 0.62
UBXN1-202ENST00000301935 RTL5Q5HYW3 569 aaPredicted RBP18.93■□□□□ 0.62
UBXN1-202ENST00000301935 SAMD7Q7Z3H4 446 aa18.93■□□□□ 0.62
UBXN1-202ENST00000301935 CCDC191Q8NCU4 936 aa18.93■□□□□ 0.62
UBXN1-202ENST00000301935 PSME4Q14997 1843 aa18.93■□□□□ 0.62
UBXN1-202ENST00000301935 RTL9Q8NET4 1388 aa18.93■□□□□ 0.62
UBXN1-202ENST00000301935 C6orf229H3BNL8 230 aa18.92■□□□□ 0.62
UBXN1-202ENST00000301935 IRS4O14654 1257 aaPredicted RBP18.92■□□□□ 0.62
UBXN1-202ENST00000301935 ZBTB7BO15156 539 aaPredicted RBP18.92■□□□□ 0.62
UBXN1-202ENST00000301935 RPS12P25398 132 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms