RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 RRP15Q9Y3B9 282 aaKnown RBP10.22□□□□□ -0.77
CTDSPL-201ENST00000273179 DNMT1P26358 1616 aaKnown RBP10.22□□□□□ -0.77
CTDSPL-201ENST00000273179 ANKRD50Q9ULJ7 1429 aa10.22□□□□□ -0.77
CTDSPL-201ENST00000273179 OTUD6AQ7L8S5 288 aa10.22□□□□□ -0.77
CTDSPL-201ENST00000273179 ELOA2Q8IYF1 753 aaPredicted RBP10.22□□□□□ -0.77
CTDSPL-201ENST00000273179 ATP11CQ8NB49 1132 aa10.22□□□□□ -0.77
CTDSPL-201ENST00000273179 DUSP9Q99956 384 aaKnown RBP10.22□□□□□ -0.77
CTDSPL-201ENST00000273179 CD248Q9HCU0 757 aa10.22□□□□□ -0.77
CTDSPL-201ENST00000273179 ROCK1Q13464 1354 aa10.22□□□□□ -0.77
CTDSPL-201ENST00000273179 HSPA4P34932 840 aa10.21□□□□□ -0.77
CTDSPL-201ENST00000273179 ADD2P35612 726 aa10.21□□□□□ -0.77
CTDSPL-201ENST00000273179 SNRNP27Q8WVK2 155 aaKnown RBP10.21□□□□□ -0.77
CTDSPL-201ENST00000273179 TACO1Q9BSH4 297 aaKnown RBP10.21□□□□□ -0.77
CTDSPL-201ENST00000273179 POLR3GO15318 223 aaPredicted RBP10.21□□□□□ -0.77
CTDSPL-201ENST00000273179 NAALADL2Q58DX5 795 aa10.21□□□□□ -0.77
CTDSPL-201ENST00000273179 NAP1L3Q99457 506 aaPredicted RBP10.21□□□□□ -0.77
CTDSPL-201ENST00000273179 TMC6Q7Z403 805 aa10.21□□□□□ -0.78
CTDSPL-201ENST00000273179 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.21□□□□□ -0.78
CTDSPL-201ENST00000273179 SAAL1Q96ER3 474 aa10.21□□□□□ -0.78
CTDSPL-201ENST00000273179 ABCA8O94911 1581 aa10.21□□□□□ -0.78
CTDSPL-201ENST00000273179 GCC2Q8IWJ2 1684 aa10.21□□□□□ -0.78
CTDSPL-201ENST00000273179 TIMM44O43615 452 aa10.21□□□□□ -0.78
CTDSPL-201ENST00000273179 CAVIN2O95810 425 aa10.21□□□□□ -0.78
CTDSPL-201ENST00000273179 FOSP01100 380 aaPredicted RBP10.21□□□□□ -0.78
CTDSPL-201ENST00000273179 SNX16P57768 344 aa10.21□□□□□ -0.78
CTDSPL-201ENST00000273179 GABPB2Q8TAK5 448 aaPredicted RBP10.21□□□□□ -0.78
CTDSPL-201ENST00000273179 JDP2Q8WYK2 163 aa10.21□□□□□ -0.78
CTDSPL-201ENST00000273179 TNMDQ9H2S6 317 aa10.21□□□□□ -0.78
CTDSPL-201ENST00000273179 C9orf84Q5VXU9 1444 aa10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 PPM1FP49593 454 aaPredicted RBP10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 SFSWAPQ12872 951 aaKnown RBP10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 HSP90AA5PQ58FG0 334 aa10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 HELLSQ9NRZ9 838 aa10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 KTN1Q86UP2 1357 aaKnown RBP10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 FLIIQ13045 1269 aa10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 KCTD2Q14681 263 aa10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 SAMD14Q8IZD0 417 aaPredicted RBP10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 MYOCDQ8IZQ8 938 aa10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 TANGO6Q9C0B7 1094 aa10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 FAM177BA6PVY3 158 aa10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 LDHCP07864 332 aa10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 STIP1P31948 543 aaKnown RBP10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 PEX5LQ8IYB4 626 aa10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 CACTIN-AS1Q8N1I8 211 aa10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 TSC1Q92574 1164 aa10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 MKL2Q9ULH7 1088 aa10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 PAIP2BQ9ULR5 123 aaKnown RBP10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 KIF15Q9NS87 1388 aa10.2□□□□□ -0.78
CTDSPL-201ENST00000273179 RETREG1Q9H6L5 497 aa10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 PZPP20742 1482 aa10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 ERC2O15083 957 aa10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 IKQ13123 557 aaPredicted RBP10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 CCDC121Q6ZUS5 278 aa10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 GPATCH3Q96I76 525 aa10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 CENPHQ9H3R5 247 aa10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 IFT122Q9HBG6 1241 aa10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 ZNF652Q9Y2D9 606 aa10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 AFAP1Q8N556 730 aa10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 CENPTQ96BT3 561 aa10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 SEZ6LQ9BYH1 1024 aa10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 BLOC1S6Q9UL45 172 aa10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 RPS6KA3P51812 740 aa10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 NFE2L2Q16236 605 aa10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 AGAP9Q5VTM2 703 aa10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 DCLK2Q8N568 766 aa10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 PRKRIP1Q9H875 184 aaPredicted RBP10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 AASDHPPTQ9NRN7 309 aa10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 MKS1Q9NXB0 559 aa10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 SATB2Q9UPW6 733 aa10.19□□□□□ -0.78
CTDSPL-201ENST00000273179 ABCC10Q5T3U5 1492 aa10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 IMPDH2P12268 514 aa10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 LAMB3Q13751 1172 aa10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 KIAA0753Q2KHM9 967 aa10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 C9orf131Q5VYM1 1079 aa10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 ALKBH2Q6NS38 261 aa10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 SUGP1Q8IWZ8 645 aaKnown RBP10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 RABEP2Q9H5N1 569 aa10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 DISC1Q9NRI5 854 aa10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 TMEM63CQ9P1W3 806 aa10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 SPAG9O60271 1321 aaKnown RBP10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 ERBB4Q15303 1308 aa10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 H0YC42 278 aa10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 TRIM66O15016 1216 aa10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 CSPG5O95196 566 aa10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 ZFXP17010 805 aaPredicted RBP10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 LRRFIP1Q32MZ4 808 aaKnown RBP10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 BAG1Q99933 345 aaPredicted RBP10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 MAK16Q9BXY0 300 aaKnown RBP10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 AKAP2Q9Y2D5 859 aa10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 ZBED9Q6R2W3 1325 aa10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 SBNO2Q9Y2G9 1366 aa10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 FMNL1O95466 1100 aaPredicted RBP10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 HSPA1AP0DMV8 641 aaKnown RBP10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 HSPA1BP0DMV9 641 aaKnown RBP10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 EIF2B5Q13144 721 aaKnown RBP10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 PARP9Q8IXQ6 854 aa10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 CTCFLQ8NI51 663 aaPredicted RBP10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 GIPC2Q8TF65 315 aa10.18□□□□□ -0.78
CTDSPL-201ENST00000273179 CCDC144AA2RUR9 1427 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms